BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0214900 Os11g0214900|Os11g0214900
(189 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 97 5e-21
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 92 2e-19
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 83 9e-17
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 82 2e-16
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 82 2e-16
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 77 8e-15
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 76 1e-14
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 71 4e-13
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 70 5e-13
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 70 1e-12
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 67 4e-12
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 65 3e-11
AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272 64 7e-11
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 56 1e-08
AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323 50 6e-07
AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390 50 1e-06
AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244 47 6e-06
AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448 47 7e-06
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HLHFY HD +G PTA++V R +FG I+ ++ LTEG
Sbjct: 41 HLHFYFHDVISGDKPTAVKVAEARPTTTLNV--------------KFGVIMIADDPLTEG 86
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
P S VG AQG + ++ + + V AGE GS++ GR D+ + RE +
Sbjct: 87 PDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPI 146
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATGGIVEIDLYLKH 189
IGGTG FR ARGY + K Y + +VE ++++ H
Sbjct: 147 IGGTGAFRFARGYALPKTYKI-VGLDAVVEYNVFIWH 182
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HLHFY HD +G PTA++V R S FG I+ ++ LTEG
Sbjct: 44 HLHFYFHDVISGDKPTAVKVAEARR--------------TNSSNVNFGVIMIADDPLTEG 89
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
P S VG AQG + + + ++ AGE GS+V GR ++ + RE +
Sbjct: 90 PDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPI 149
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATGGIVEIDLYLKH 189
IGGTG FR ARGY K Y + +VE ++++ H
Sbjct: 150 IGGTGAFRFARGYAQAKTYK-VVGLDAVVEYNVFIWH 185
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HLHFY HD +G PT +RV S FG ++ ++ +TEG
Sbjct: 52 HLHFYFHDIISGDKPTTIRVAEAPG--------------TNSSATVFGAVLIVDAPVTEG 97
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
P S VG AQG + + V GE GS+ GR + ERE +
Sbjct: 98 PELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPI 157
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATGGIVEIDLYLKH 189
IGGTG FR ARGY + K Y + +VE ++++ H
Sbjct: 158 IGGTGDFRFARGYALPKTYK-VVNIDAVVEYNVFIWH 193
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HLHFY HD +G PT+++V +G + S FG + +++ LT G
Sbjct: 46 HLHFYFHDIVSGDKPTSVQVANGPT--------------TNSSATGFGLVAVVDDKLTVG 91
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
P S VG AQG + + ++ ++V G+ S+V GR + + RE +
Sbjct: 92 PEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPI 151
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
IGGTG FR RGY + K +++ +G +VE ++Y+ H
Sbjct: 152 IGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
+LHF+ HD T P P+A+ + S P FG + AL++ LT G
Sbjct: 38 NLHFFFHDTLTAPNPSAILIAK----------PTHTRGDNDSSPSPFGSLFALDDPLTVG 87
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVL--EAGEHRGSSVTAKGRIDMDAGERES 150
P S ++G A+G + VS G + L++++ +G+ GSS+ R + ERE
Sbjct: 88 PDPKSEKIGNARG--MYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREV 145
Query: 151 VVIGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
V+GG GRFR+ARG Y +L G IVE ++ L H
Sbjct: 146 AVVGGRGRFRMARGVAQLNTYYVNLTNGDAIVEYNVTLYH 185
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQ------FGDIVALN 86
H Y HD TG +++ +++ PP++ FG + ++
Sbjct: 41 HFRVYWHDIVTGQDSSSVSIMN--------------------PPKKYTGATGFGLMRMID 80
Query: 87 NALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAG 146
N LT P S VG AQGF S+ + ++++ + G++ GS++T GR +
Sbjct: 81 NPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDK 140
Query: 147 ERESVVIGGTGRFRLARGYMVTKNYDYSLATGG-IVEIDLYLKH 189
RE VIGG+G FR ARGY+ ++++L TG IVE + YL H
Sbjct: 141 VREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLH 184
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HL Y HD TG P+++R+ S FG I ++NALT
Sbjct: 47 HLRVYWHDIVTGRNPSSIRI--------------QGPVAKYSSSSYFGSITMIDNALTLD 92
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
S VG AQG V ++ + +++++ + G++ GS++T GR + + RE V
Sbjct: 93 VPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPV 152
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
+GG+G FR ARGY+ + + + TG VE + Y+ H
Sbjct: 153 VGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILH 190
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 34 LHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEGP 93
+ FY+HD +G PTA+R+ + P FG + +++ LT GP
Sbjct: 41 VRFYLHDTLSGQNPTAVRIAHAN------------LTGGSASPVGFGSLFVIDDPLTVGP 88
Query: 94 SAGSARVGTAQGFAVRVSEGGVLSDLSLHM----VLEAGEHRGSSVTAKGR--IDMDAGE 147
S +G QG + VS LS ++ M AG+ GSS++ R + + GE
Sbjct: 89 EKHSKEIGNGQG--MYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGE 146
Query: 148 RESVVIGGTGRFRLARGYMVTKNYDYSLATGGIV 181
RE ++GG G+FR+ARG++ K + TG V
Sbjct: 147 REIAIVGGRGKFRMARGFVKVKTNKIDMKTGDAV 180
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
+L FY HD +G PTA++V G P FG + +++ALTE
Sbjct: 44 NLQFYFHDTLSGKNPTAVKVAQGTD--------------TEKSPTLFGAVFMVDDALTET 89
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
S VG AQG + V +++ E G ++ S+++ G+ RE +
Sbjct: 90 ADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPI 149
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
+GGTG FR+ARGY + + + TG IV ++ + H
Sbjct: 150 VGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPP----RQFGDIVALNNA 88
H Y HD +GP PT++ + PP FG I ++NA
Sbjct: 46 HFKVYWHDILSGPNPTSIMI---------------------QPPVTNSSYFGAISMIDNA 84
Query: 89 LTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGER 148
LT S +G AQGF ++ + ++++ + G++ GS++T GR + R
Sbjct: 85 LTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVR 144
Query: 149 ESVVIGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
E ++GG+G FR ARGY+ + +L G VE Y+ H
Sbjct: 145 EMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYVLH 186
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 38/206 (18%)
Query: 1 MASLSSVLVGCFLLAAAVFLHRNGASXXXXXXHLHF------------YMHDAYTGPAPT 48
MA L ++V LL AAV R G + HF Y HD +G P+
Sbjct: 1 MAKLILIIVTQILLIAAVVSARKGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPS 60
Query: 49 AMRVVSGRSLLXXXXXXXXXXXXXXSPPRQ----FGDIVALNNALTEGPSAGSARVGTAQ 104
++ + +PP FG + ++N LT + S VG AQ
Sbjct: 61 SVVI---------------------NPPISNSSFFGSVTVIDNRLTTEVAVNSTLVGQAQ 99
Query: 105 GFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVVIGGTGRFRLARG 164
G + + + ++ + G++ GSS+ GR + RE VIGG+G FR ARG
Sbjct: 100 GIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARG 159
Query: 165 YMVTKNYDYSLATG-GIVEIDLYLKH 189
Y+ + + +G VE Y+ H
Sbjct: 160 YVEARTMWFDQKSGDATVEYSCYVLH 185
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 79 FGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAK 138
FG I +NALT S VG +QGF ++ + ++++ + G++ GS++T
Sbjct: 13 FGSITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITIL 72
Query: 139 GRIDMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLATG-GIVEIDLYLKH 189
GR + + RE V+GG+G FRLARGY+ + + TG VE + Y+ H
Sbjct: 73 GRNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYVLH 124
>AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272
Length = 271
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 82 IVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRI 141
I +++ LT GP S VG AQG + ++ + V GE GS+V+ GR
Sbjct: 163 IPLVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGRN 222
Query: 142 DMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLATGG-IVEIDLYLKH 189
+ + RE +IGGTG FR RGY K + ++ +G +V+ ++Y+ H
Sbjct: 223 PIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYIWH 271
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 33 HLHFYMHDAYTGPAPTAMRVVSGRSLLXXXXXXXXXXXXXXSPPRQFGDIVALNNALTEG 92
HL Y H++ G P++ V+ + +L G I +++ LT
Sbjct: 44 HLRVYWHNSVNGRNPSS--VMIQQPVLNSSLS---------------GSITMMDDPLTFD 86
Query: 93 PSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVV 152
+ VG AQG V ++G + + ++ G++ GS++T GR + + RE V
Sbjct: 87 VPRNATVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPV 146
Query: 153 IGGTGRFRLARGYMVTKNYDYSLATG 178
+GG+G FR ARGY+ + + L G
Sbjct: 147 VGGSGIFRFARGYVEARTKSFDLKAG 172
>AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323
Length = 322
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 79 FGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHR-----GS 133
FG I +++ LTE GSA +G AQGF + S G LSL ++L GEH
Sbjct: 200 FGTITVVDDELTESHELGSAVIGRAQGFYLASSLDGTSQTLSLTVLLH-GEHDQHDTLDD 258
Query: 134 SVTAKGRIDMDAGERESVVIGGTGRFRLARGYMVTK---NYDYSLATGG---IVEIDLYL 187
+++ G + + VIGGTG+F A+GY + + N D T G I+ +YL
Sbjct: 259 AISFFGVHRTASHASQIAVIGGTGKFEHAKGYAIVETLHNQDNQHITDGQDTILHFSVYL 318
Query: 188 KH 189
+
Sbjct: 319 TY 320
>AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390
Length = 389
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 79 FGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAK 138
FG + ++N LTEG GS +G AQGF V + G ++ + E+G + S++
Sbjct: 268 FGTLTVMDNELTEGHELGSGLLGKAQGFYVASALDGTSQTMAFTAMFESGGYE-DSISFF 326
Query: 139 GRIDMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLAT 177
G A E V+GGTG++ ARG+ + K + S T
Sbjct: 327 GVHRTAASESHLGVMGGTGKYVNARGFAIVKTFTGSSGT 365
>AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244
Length = 243
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 79 FGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAK 138
FG I +++ LT GP GS +G AQG V S G ++ +LE GE+ ++
Sbjct: 129 FGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYN-DNLNFY 187
Query: 139 GRIDMDAGERESVVIGGTGRFRLARGY 165
G + + V GGTGRF+ A G+
Sbjct: 188 GIYRIGSAMSHLSVTGGTGRFKNACGF 214
>AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448
Length = 447
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 79 FGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVLSDLSLHMVLEAGEHRGSSVTAK 138
FG + +++ LTEG GS +G AQG+ V + G ++ + E+G + S++
Sbjct: 326 FGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYE-DSISFF 384
Query: 139 GRIDMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLAT 177
G + E V+GGTG++ ARG+ + K + S T
Sbjct: 385 GVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGT 423
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,395,593
Number of extensions: 115206
Number of successful extensions: 282
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 20
Length of query: 189
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 96
Effective length of database: 8,556,881
Effective search space: 821460576
Effective search space used: 821460576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)