Os11g0214100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Histidine-rich glycoprotein precursor.
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Os11g0214100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Histidine-rich glycoprotein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.6 | 0.682 | 12.6 | 0.52 | 1.21 | -1.49 | 0.675 | -1.81 | -0.394 | 11.3 | 21.49 | 1570 | -- | -- |
| 217.24 | 0.686 | 12.6 | 0.942 | 1.17 | -1.3 | 0.689 | -- | -0.285 | 11.2 | 21.77 | 1367 | -- | -- |
| 212.55 | 0.679 | 12.6 | 0.551 | 1.21 | -1.48 | -- | -1.78 | -0.388 | 11.4 | 21.47 | 1565 | -- | -- |
| 219.28 | 0.69 | 12.6 | 0.98 | 1.17 | -1.3 | -- | -- | -0.28 | 11.3 | 21.75 | 1414 | -- | -- |
| 272.17 | 0.768 | 12.6 | 0.523 | -- | -1.46 | -- | -1.28 | -0.322 | -- | 21.9 | 874 | -- | -- |
| 271.18 | 0.772 | 12.7 | 0.421 | 1.22 | -- | 0.609 | -- | -0.678 | 11.4 | -- | -- | -- | -- |
| 272.75 | 0.773 | 12.7 | 0.447 | 1.21 | -- | -- | -- | -0.675 | 11.4 | -- | -- | -- | -- |
| 276.86 | 0.775 | 12.6 | 0.849 | -- | -1.34 | -- | -- | -0.27 | -- | 22.3 | 869 | -- | -- |
| 233.78 | 0.712 | 12.6 | -- | 1.03 | -0.951 | -- | -- | -0.438 | 11.3 | 22.4 | 844 | -- | -- |
| 365.01 | 0.893 | 12.7 | 0.415 | -- | -- | -- | -- | -0.687 | -- | -- | -- | -- | -- |
| 278.01 | 0.78 | 12.7 | -- | 1.21 | -- | -- | -- | -0.725 | 11.4 | -- | -- | -- | -- |
| 295.23 | 0.8 | 12.6 | -- | -- | -1.21 | -- | -- | -0.36 | -- | 22.4 | 855 | -- | -- |
| 369.55 | 0.897 | 12.7 | -- | -- | -- | -- | -- | -0.733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.91 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 3 | 210.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 6 | 210.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 8 | 211.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 9 | 211.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 14 | 211.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 19 | 212.48 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 20 | 212.70 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 21 | 212.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 27 | 213.10 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 35 | 214.24 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 37 | 214.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 50 | 216.27 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 51 | 216.42 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 53 | 216.48 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 58 | 216.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 69 | 217.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 70 | 217.63 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 90 | 218.16 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 94 | 218.32 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 95 | 218.32 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 96 | 218.34 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 100 | 218.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 119 | 218.64 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 143 | 219.06 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 145 | 219.11 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 169 | 219.60 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 184 | 219.88 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 197 | 220.05 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 199 | 220.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 204 | 220.10 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 208 | 220.22 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 239 | 220.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 264 | 220.89 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 269 | 220.94 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 284 | 221.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 286 | 221.17 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 293 | 221.25 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 314 | 221.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 336 | 221.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 338 | 221.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 343 | 221.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 348 | 221.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 349 | 221.85 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 350 | 221.85 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 352 | 221.86 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 367 | 221.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 368 | 221.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 380 | 222.04 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 402 | 222.14 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 430 | 222.24 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 437 | 222.27 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 468 | 222.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 494 | 222.60 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 497 | 222.61 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 524 | 222.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 572 | 222.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 611 | 223.14 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 623 | 223.19 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 683 | 223.42 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 684 | 223.42 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 741 | 223.63 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 769 | 223.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 808 | 223.88 | temperature | 20.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 866 | 224.10 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 875 | 224.13 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 907 | 224.26 | temperature | 20.0 | 4320 | < th | dose independent | sin | 16 | NA |