BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0162900 Os11g0162900|AK107274
(337 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0162900 Conserved hypothetical protein 645 0.0
Os11g0162100 299 2e-81
Os11g0159500 Conserved hypothetical protein 101 6e-22
Os01g0843100 80 3e-15
Os11g0160000 Protein of unknown function DUF241, plant fami... 74 2e-13
Os01g0842900 71 1e-12
Os11g0662600 68 1e-11
Os01g0843200 65 8e-11
>Os11g0162900 Conserved hypothetical protein
Length = 337
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/337 (94%), Positives = 319/337 (94%)
Query: 1 MEIPNQISXXXXXXSVVIEIPAATEIAGVDTAPAKVCDDDPRAQPLRDREWVSQLPPDHP 60
MEIPNQIS SVVIEIPAATEIAGVDTAPAKVCDDDPRAQPLRDREWVSQLPPDHP
Sbjct: 1 MEIPNQISGGGGGGSVVIEIPAATEIAGVDTAPAKVCDDDPRAQPLRDREWVSQLPPDHP 60
Query: 61 LRYTCGLPNGVFLSMSFVTIIYAVIAPWMLWRVATDHVSLMWTSSILACSYGALWTIALS 120
LRYTCGLPNGVFLSMSFVTIIYAVIAPWMLWRVATDHVSLMWTSSILACSYGALWTIALS
Sbjct: 61 LRYTCGLPNGVFLSMSFVTIIYAVIAPWMLWRVATDHVSLMWTSSILACSYGALWTIALS 120
Query: 121 ERLAGAFLAIIFRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRG 180
ERLAGAFLAIIFRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRG
Sbjct: 121 ERLAGAFLAIIFRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRG 180
Query: 181 TEQCPSAILAAKPPPLEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCLI 240
TEQCPSAILAAKPPPLEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCLI
Sbjct: 181 TEQCPSAILAAKPPPLEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCLI 240
Query: 241 SYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNTLFCKMPICFGAWFXXXXXXXXXXX 300
SYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNTLFCKMPICFGAWF
Sbjct: 241 SYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNTLFCKMPICFGAWFVLGVLLGVPVS 300
Query: 301 XAIEMLIFWIGTMALAGFFGYCLAVHAYCKRNQKTPA 337
AIEMLIFWIGTMALAGFFGYCLAVHAYCKRNQKTPA
Sbjct: 301 GAIEMLIFWIGTMALAGFFGYCLAVHAYCKRNQKTPA 337
>Os11g0162100
Length = 363
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/323 (52%), Positives = 215/323 (66%), Gaps = 18/323 (5%)
Query: 19 EIPAATEIAGVDTA---PAKV--CDDDPRAQPLRDREWVSQLPPDHPLRYTCGLPNGVFL 73
+IPA EI G DTA KV + + A PL RE ++ LPP+HP YTCGLPN VF
Sbjct: 34 DIPA-MEILG-DTAGEVKEKVLSTESEKPAPPLSRRERIALLPPNHPYHYTCGLPNFVFF 91
Query: 74 SMSFVTIIYAVIAPWMLWRVATDH-VSLMWTSSILACSYGALWTIALSERLAGAFLAIIF 132
+M+ V+ +YAVI P++LWR A D SL+WT SILACSYG W I+LSE L + + F
Sbjct: 92 AMAMVSFLYAVIVPFLLWRAAADKPTSLIWTWSILACSYGIFWIISLSEVLG--VIVVFF 149
Query: 133 RVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCPSAILAAK 192
RVSYVA VA AST L+G+ G+SIVYLDTFYVAGM+GYAVAEYR+RRG E+CPSA+ AA
Sbjct: 150 RVSYVAFVAAASTQLVGSITGVSIVYLDTFYVAGMVGYAVAEYRMRRGIEECPSAV-AAM 208
Query: 193 PPPLEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCL---ISYVIEELSF 249
PP + ++ + E ++Y F+FG VSL VGRMAWL+ + GG IS V+EELS
Sbjct: 209 PPLISQEQERNREVNVFYAAFMFGLVSLVTVGRMAWLVFFSNGGGGGGGRISSVLEELSV 268
Query: 250 EASMLIYIWVIFVSLTQLEGALVCYNTLFCKMPICFGAWFXX-XXXXXXXXXXAIEMLIF 308
E + + W FV+L +LV +N LFC +PIC+ AW+ AIE+L F
Sbjct: 269 ETCFVSFQWTAFVALPL---SLVSFNALFCWVPICYVAWYVLGAILGALVGSVAIEVLFF 325
Query: 309 WIGTMALAGFFGYCLAVHAYCKR 331
W+ +A+AGFFGYCLAVHA CKR
Sbjct: 326 WLAAVAMAGFFGYCLAVHARCKR 348
>Os11g0159500 Conserved hypothetical protein
Length = 358
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 20/294 (6%)
Query: 50 EWVSQLPPDHPLRYTCGLPNGVFLSMSFVTIIYAVIAPWML--WR-VAT----DH--VSL 100
E + +L + P +T G+ N +M ++++YAV++ +L W+ + T DH ++
Sbjct: 60 ENIHRLDRNDPFFFTWGMRNETAYAMCLLSLLYAVLSLCLLLPWQPIPTEGDGDHPLINS 119
Query: 101 MWTSSILACSYGALWTIALSERLAGAFLAIIFRVSYVALVAFASTHLIGTANGISIVYLD 160
+WT S+LA SY W I+LSE + L ++Y L+AFA HL+G G++++ +
Sbjct: 120 IWTFSLLALSYMFCWIISLSEAITK--LVAFTSITYGILMAFAVAHLLGRVVGMAVIVIA 177
Query: 161 TFYVAGMLGYAVAEYRLRRGTEQCPSAILAAKPPPLEDQERGDEEAGLYYMGFL-FGSVS 219
Y GM +A+AE+R G++ A+L K L ++ EE L + F+ G+ S
Sbjct: 178 VLYTTGMFAHAIAEHRQHTGSDTAADALLTKK---LTTEQMQREE--LRRLPFIVLGAYS 232
Query: 220 LCLVGRMAWLLLYPCG--GKCLISYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNTL 277
L + G AWL+ G + V+ E+S + Y+W I +S+ L V ++T+
Sbjct: 233 LFVFGCTAWLVFTEMGSISTATVIIVLAEVSIGTCFISYLWSILLSVGLLHDTFVSHDTI 292
Query: 278 FCKM-PICFGAWFXXXXXXXXXXXXAIEMLIFWIGTMALAGFFGYCLAVHAYCK 330
K +F + + + + MA+AGF GY +AV+++ K
Sbjct: 293 VFKAGSYSIALYFLAFLLIAMFESKLLGLSVLLLIPMAMAGFLGYLVAVYSHYK 346
>Os01g0843100
Length = 386
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 78 VTIIYAVIAPWMLWRVATDHVSLMWTSSILACSYGALWTIALSERLAGAFLAIIFRVSYV 137
V ++ V +P +L R + D ++L+WT ++L C++ +LS + + + FRVSY
Sbjct: 113 VPFLFLVCSPPLLRRHSGDPLALLWTIALLMCTHLFFLISSLSRTMRPS--TVFFRVSYG 170
Query: 138 ALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCPSAILAAKPPPLE 197
LVA A+ G G ++++L T + AG+LGYA AE+ G E + A P L
Sbjct: 171 VLVAVAADTFAGPDAGFAVMHLATGWTAGLLGYAYAEHLQHIGKETTAKNM--APPTFLT 228
Query: 198 DQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCLISYVIEELSFEASMLIYI 257
++E + + F +SL + A L+ P +S ++ LS + IY
Sbjct: 229 EEEESSFKVHRRSVAAFFTLLSLAVATAGALLVKMPPPA---LSLLVTILSILEGIAIYC 285
Query: 258 WVIF----------VSLTQLEGALVCY-------NTLFCKMPICFGAWFXXXXXXXXXXX 300
W IF VS+ QL G ++CY +++ C C
Sbjct: 286 WAIFTAKFLLFEAFVSVHQL-GYMLCYIGPYLLLSSILCVPLSCL-----------VLAG 333
Query: 301 XAIEMLIFWIGTMALAGFFGYCLAVHAYCKR 331
AI + FW MA+AG GY L+V +
Sbjct: 334 DAIGAMFFWFVMMAIAGLLGYMLSVRVQYNK 364
>Os11g0160000 Protein of unknown function DUF241, plant family protein
Length = 729
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 75 MSFVTIIYAVIAPWML-WRVATDHVSLMWTS--SILACSYGALWTIALSERLAGAFLAII 131
M V++ YAV++ ++L WRV D L W + S+LAC+Y W I+LSE + +A
Sbjct: 12 MRLVSLAYAVLSLYLLLWRVPGDQ-PLTWVTDFSLLACTYMYFWIISLSETITK--VATF 68
Query: 132 FRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCPSAILAA 191
++ L++FA+ L+G G++++ L AG+LG+AVAE+R R G+E+ SA+
Sbjct: 69 TGITCGILLSFAAAQLLGPVTGMAVMVLGMLCAAGVLGHAVAEHRHRIGSEEAASALATW 128
Query: 192 KPPPLEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGG 236
+ + A ++ G L + SL L+ MAWL + GG
Sbjct: 129 TLTEEQTELEEGPYA--FHAGVLVAAYSLFLLAVMAWLAVDQRGG 171
>Os01g0842900
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 21/278 (7%)
Query: 66 GLPNGVFLSMSFVTIIYAVIAPWMLWRVATDHVSLMWTSSILACSYGALWTIALSERLAG 125
G P+ + + ++ ++ V +P +L R + + ++L+WT + L +Y LS +
Sbjct: 38 GGPDHIIPRVILISCMFLVFSPPLLLRNSCEPLALLWTIAFLISAYLFFLISTLSRTIRP 97
Query: 126 AFLAIIFRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCP 185
+ + +SY L+A A+ + G + G ++++L T + AG+LGYA A++ R GTE
Sbjct: 98 S--TVFLHISYGVLLADAAGTVAGPSVGFAVMHLATGWTAGLLGYAYADHLQRIGTE--- 152
Query: 186 SAILAAKPPPL---EDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCG--GKCLI 240
+A + PP E++ + G+ G FG +SL +V +A LLL P L+
Sbjct: 153 TAAMRVDPPTFLTEEEETSFKTDRGVRAAG--FGIISLLMVTPIA-LLLRPFADPDPDLL 209
Query: 241 SYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNTLFCKMPICF-------GAWFXXXX 293
+ LS I W FV+ L AL+ + + M +C+ +
Sbjct: 210 PMFVAFLSVVEGAAILSWAAFVARFVLHDALLSVDQIGHIM-LCYIVPYLVISFFLLLLL 268
Query: 294 XXXXXXXXAIEMLIFWIGTMALAGFFGYCLAVHAYCKR 331
I W +++AG GY L+VHA C +
Sbjct: 269 TGVGFAGETIGATFLWCMMLSIAGLLGYELSVHAQCNQ 306
>Os11g0662600
Length = 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 126 AFLAIIFRVSYVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCP 185
+F AI+ V + AL+A+ + H+ GT G +YL++ + A GYA+AE R GTEQ
Sbjct: 115 SFCAIVVDVYFGALLAYYADHVFGTRIGTVTIYLNSIFTAAFAGYALAERRRSDGTEQSA 174
Query: 186 SAILAAKPPPLEDQERGDEEAGLYYMGFLFGSVSLCL-VGRMAWLLLYPCGGKCLISYVI 244
+ P D+E + + S++L ++W++L+P + +
Sbjct: 175 DNV-----PAFADEEEEEYARAVLISSAAVISITLLFPTAYVSWMILWPYATTDDDGFRV 229
Query: 245 EELSFEASMLIYIWVIF----VSLTQLEGALVCYN---------TLFCKMPICFGAWFXX 291
E++ + S I ++ F V+ L GAL+ ++ +P+ F F
Sbjct: 230 EDVLRDLSYTILAYLFFATTLVTRHLLRGALLGDGRFYVFLVVFSIITVLPLFFAGIFGD 289
Query: 292 XXXXXXXXXXAIEMLIFWIGTMALAGFFGYCLAVHAYCKRNQ 333
+++ W+G +ALA FGY +++++Y + Q
Sbjct: 290 IAG----------IVVIWLGIIALAVLFGYSVSIYSYYTQIQ 321
>Os01g0843200
Length = 381
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 17/264 (6%)
Query: 77 FVTIIYAVIAPWMLWRVAT-DHVSLMWTSSILACSYGALWTIALSERLAGAFLAIIFRVS 135
F++I++ +P +L R + + ++ +WT ++L +Y LS + + +S
Sbjct: 123 FISILFLACSPPLLRRRHSGEPLAHLWTIALLMSAYLFFLISILSRTMRPT--TVFVHIS 180
Query: 136 YVALVAFASTHLIGTANGISIVYLDTFYVAGMLGYAVAEYRLRRGTEQCPSAILAAKPPP 195
Y L+A ++ G G ++++L T + AG+LGYA AE+ G E+ +A+ A P
Sbjct: 181 YGVLLAISAGTFAGPIAGFAVMHLATGWTAGLLGYAFAEHLQHIGKEK--TAMRMAPPTF 238
Query: 196 LEDQERGDEEAGLYYMGFLFGSVSLCLVGRMAWLLLYPCGGKCLISYVIEELSFEASMLI 255
++E+ E + F S+ + MA L+ P +S ++ LS I
Sbjct: 239 STEEEKSSFEIHRSGVVTFFAVFSMLVATAMALLVKVPPRD---LSLLVINLSVLEGTAI 295
Query: 256 YIWVIFVSLTQLEGALVCYNTLFCKMPICFGAWFXXX------XXXXXXXXXAIEMLIFW 309
Y W +FV+ L ALV + L M GA+ + + FW
Sbjct: 296 YCWAVFVAKFALFEALVTVDQL-GYMMFYIGAYLLVSFLVCLMSYLVLAGDAIVGAMFFW 354
Query: 310 IGTMALAGFFGYCLAVHAYCKRNQ 333
MA+AG GY L+V A + NQ
Sbjct: 355 FLMMAMAGLIGYMLSVRA--QYNQ 376
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,534,018
Number of extensions: 455061
Number of successful extensions: 1368
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1351
Number of HSP's successfully gapped: 8
Length of query: 337
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,762,187
Effective search space: 2775876132
Effective search space used: 2775876132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 156 (64.7 bits)