Os11g0162100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0162100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.2 | 0.431 | 3.3 | 0.142 | 0.114 | 0.29 | 0.0639 | 0.833 | -0.0351 | 8.34 | 90.1 | 4937 | -- | -- |
| 85.11 | 0.43 | 3.3 | 0.104 | 0.109 | 0.3 | -0.0549 | -- | -0.049 | 7.78 | 96 | 4795 | -- | -- |
| 84.21 | 0.427 | 3.3 | 0.14 | 0.113 | 0.288 | -- | 0.808 | -0.0344 | 8.24 | 89.41 | 4915 | -- | -- |
| 85.04 | 0.43 | 3.3 | 0.105 | 0.0961 | 0.31 | -- | -- | -0.0506 | 7.88 | 89 | 4794 | -- | -- |
| 84.52 | 0.428 | 3.3 | 0.148 | -- | 0.268 | -- | 0.847 | -0.0304 | -- | 89.78 | 5878 | -- | -- |
| 86.38 | 0.436 | 3.29 | 0.0747 | 0.0788 | -- | -0.023 | -- | 0.0109 | 8.57 | -- | -- | -- | -- |
| 86.38 | 0.435 | 3.29 | 0.074 | 0.0787 | -- | -- | -- | 0.011 | 8.65 | -- | -- | -- | -- |
| 85.31 | 0.43 | 3.3 | 0.0886 | -- | 0.342 | -- | -- | -0.0479 | -- | 88.96 | 4322 | -- | -- |
| 85.15 | 0.43 | 3.3 | -- | 0.0805 | 0.33 | -- | -- | -0.0505 | 7.8 | 87.98 | 4346 | -- | -- |
| 86.73 | 0.435 | 3.29 | 0.0742 | -- | -- | -- | -- | 0.0117 | -- | -- | -- | -- | -- |
| 86.53 | 0.435 | 3.29 | -- | 0.0789 | -- | -- | -- | 0.00275 | 8.58 | -- | -- | -- | -- |
| 85.47 | 0.431 | 3.3 | -- | -- | 0.333 | -- | -- | -0.0543 | -- | 88 | 4339 | -- | -- |
| 86.88 | 0.435 | 3.29 | -- | -- | -- | -- | -- | 0.00343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.77 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 78.77 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 78.84 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 10 | 78.85 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 12 | 78.99 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 13 | 79.02 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 39 | 79.78 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 47 | 79.98 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 80 | 80.34 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 143 | 81.24 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 4 |
| 180 | 81.89 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 224 | 82.25 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 301 | 82.85 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 302 | 82.88 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 326 | 82.97 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 333 | 83.03 | temperature | 25.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 338 | 83.04 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 358 | 83.17 | wind | 9.0 | 90 | > th | dose independent | rect. | 19 | 15 |
| 359 | 83.17 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 360 | 83.18 | wind | 9.0 | 90 | > th | dose independent | rect. | 21 | 13 |
| 392 | 83.24 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 460 | 83.47 | humidity | 90.0 | 30 | < th | dose independent | rect. | 19 | 4 |
| 461 | 83.47 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 19 | 4 |
| 468 | 83.48 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 20 |
| 481 | 83.52 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 487 | 83.54 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 496 | 83.55 | humidity | 90.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 507 | 83.57 | wind | 3.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 510 | 83.57 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 511 | 83.57 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 11 |
| 512 | 83.57 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 524 | 83.59 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 538 | 83.60 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 540 | 83.60 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 549 | 83.64 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 561 | 83.67 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 562 | 83.67 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 565 | 83.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 568 | 83.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 570 | 83.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 573 | 83.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 574 | 83.69 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 583 | 83.69 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 615 | 83.75 | radiation | 40.0 | 30 | < th | dose independent | rect. | 2 | 12 |
| 637 | 83.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 640 | 83.79 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 643 | 83.79 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 20 |
| 660 | 83.81 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 19 | 4 |
| 698 | 83.87 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 2 |
| 712 | 83.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 9 |
| 724 | 83.88 | radiation | 10.0 | 30 | < th | dose independent | rect. | 21 | 11 |
| 725 | 83.88 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 736 | 83.90 | humidity | 90.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 752 | 83.92 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 768 | 83.92 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 8 |
| 781 | 83.92 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 814 | 83.93 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 826 | 83.95 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 829 | 83.95 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 830 | 83.95 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 846 | 83.97 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 8 |
| 849 | 83.97 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 855 | 83.98 | humidity | 60.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 861 | 83.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 866 | 83.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 887 | 84.00 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 890 | 84.01 | radiation | 20.0 | 720 | > th | dose independent | rect. | 7 | 1 |
| 906 | 84.01 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 912 | 84.01 | humidity | 60.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 913 | 84.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 933 | 84.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 941 | 84.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 983 | 84.03 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 20 |
| 985 | 84.04 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 2 |