BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0156200 Os11g0156200|AK100124
(511 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0156200 Peptidase S28 family protein 998 0.0
Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase 468 e-132
Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase 454 e-128
Os10g0511400 Peptidase S28 family protein 120 2e-27
>Os11g0156200 Peptidase S28 family protein
Length = 511
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/511 (94%), Positives = 482/511 (94%)
Query: 1 MAIHHLVASLLLFFSCCHXXXXXXXXXXXLPPTLATWRQYXXXXXXXXQVVQYETRYFTQ 60
MAIHHLVASLLLFFSCCH LPPTLATWRQY QVVQYETRYFTQ
Sbjct: 1 MAIHHLVASLLLFFSCCHAVAAGAGVRGRLPPTLATWRQYAAAAAPPPQVVQYETRYFTQ 60
Query: 61 RLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGDVALFASNTGFMWEAAPRF 120
RLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGDVALFASNTGFMWEAAPRF
Sbjct: 61 RLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGDVALFASNTGFMWEAAPRF 120
Query: 121 RAMLVFVEHRYYGESLPFGGTRXXXXXXXXXXGYLTTAQALADFAELILSLKSNLTACKA 180
RAMLVFVEHRYYGESLPFGGTR GYLTTAQALADFAELILSLKSNLTACKA
Sbjct: 121 RAMLVFVEHRYYGESLPFGGTRAAAFADASAAGYLTTAQALADFAELILSLKSNLTACKA 180
Query: 181 PVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYSFYNVVSNDFKSESK 240
PVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYSFYNVVSNDFKSESK
Sbjct: 181 PVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYSFYNVVSNDFKSESK 240
Query: 241 HCYDVLRNSWSEMYKALATDAGRARLNQTFNMCKGNVDDIPGLVEKALIYGSMMDYPTPS 300
HCYDVLRNSWSEMYKALATDAGRARLNQTFNMCKGNVDDIPGLVEKALIYGSMMDYPTPS
Sbjct: 241 HCYDVLRNSWSEMYKALATDAGRARLNQTFNMCKGNVDDIPGLVEKALIYGSMMDYPTPS 300
Query: 301 NFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGGLACFPGAGAEDDDPYG 360
NFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGGLACFPGAGAEDDDPYG
Sbjct: 301 NFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGGLACFPGAGAEDDDPYG 360
Query: 361 MFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLATTGVPPRPHWIQSYFGG 420
MFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLATTGVPPRPHWIQSYFGG
Sbjct: 361 MFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLATTGVPPRPHWIQSYFGG 420
Query: 421 YDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEPKGGHHVDLRFSTKEDPE 480
YDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEPKGGHHVDLRFSTKEDPE
Sbjct: 421 YDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEPKGGHHVDLRFSTKEDPE 480
Query: 481 WLKKVRRQEMRIIADWLKQYYSDEAIDSMMN 511
WLKKVRRQEMRIIADWLKQYYSDEAIDSMMN
Sbjct: 481 WLKKVRRQEMRIIADWLKQYYSDEAIDSMMN 511
>Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase
Length = 539
Score = 468 bits (1203), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/462 (51%), Positives = 310/462 (67%), Gaps = 17/462 (3%)
Query: 53 YETRYFTQRLDHFNELPASNGTFRQRYLVNGTFWGGAAA-------PVFVYAGNEGDVAL 105
+ YF Q LDHF P ++ F Q+YLVN TFW +AA P+FVY GNEGD+
Sbjct: 82 FTAHYFPQELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDIEW 141
Query: 106 FASNTGFMWEAAPRFRAMLVFVEHRYYGESLPFGGTRXXXXXXXXXXGYLTTAQALADFA 165
FA+NTGFM++ AP F A+LVF+EHR+YGES PFG GYLT+ QALADFA
Sbjct: 142 FATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNE---SNSSPEKLGYLTSTQALADFA 198
Query: 166 ELILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPY 225
LI SLK NL+A +PVV+FGGSYGGMLA+W R+KYPH+ +GAVASSAPIL + ++
Sbjct: 199 VLITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWS 258
Query: 226 SFYNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTFNMCK--GNVDDIPGL 283
SFY VS D+KSES +C+ V++ +W + + +TDAG +L++TF CK +V
Sbjct: 259 SFYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNW 318
Query: 284 VEKALIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTG 343
+ A +Y +M+DYPTP+NFL +LPAYP++E+C+ I +G D V + A ++YYN TG
Sbjct: 319 LWTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYNYTG 378
Query: 344 GLACFPGAGAEDDDPYGMFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLA 403
CF ED P+G+ GW WQACTE++M M+ I N ++FPP F C
Sbjct: 379 DQTCFQLEDGED--PHGL-SGWGWQACTEMVMPMT--ISNESMFPPFTFTYEGKSDDCFQ 433
Query: 404 TTGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEP 463
+ GV PRPHWI + +GG I VLKR GSNIIF NG+RDPWS GG+LK+IS+SIIALV
Sbjct: 434 SYGVRPRPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTE 493
Query: 464 KGGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQYYSDEA 505
KG HH+D R +TK+DP+W+ + RRQE++II W+ QY D A
Sbjct: 494 KGAHHLDFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNEDLA 535
>Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase
Length = 517
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/457 (49%), Positives = 303/457 (66%), Gaps = 15/457 (3%)
Query: 52 QYETRYFTQRLDHFNELPAS----NGTFRQRYLVNGTFWGGAAA-PVFVYAGNEGDVALF 106
YETRYF QRLDHF+ L +G F+QRYLV A P+F Y GNEGD+A F
Sbjct: 47 DYETRYFRQRLDHFSFLEEEGEEGDGFFQQRYLVGRGGGWAGAGGPIFFYCGNEGDIAWF 106
Query: 107 ASNTGFMWEAAPRFRAMLVFVEHRYYGESLPFGGTRXXXXXXXXXXGYLTTAQALADFAE 166
A+N+G +WEAA RF A++VF EHRYYGES+PFG ++ YLT QALAD+A
Sbjct: 107 AANSGLVWEAATRFAALVVFAEHRYYGESMPFG-SKDKAYNNSKSLAYLTAEQALADYAV 165
Query: 167 LILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYS 226
L+ LK NL++ +PVV+FGGSYGGMLAAWMR+KYPHI +GA+ASSAPIL +
Sbjct: 166 LLTDLKKNLSSEGSPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFEDVVPSTI 225
Query: 227 FYNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTFNMCK--GNVDDIPGLV 284
FY++VSNDFK ES C+ +++SW + G +L++TF++CK N ++ +
Sbjct: 226 FYDLVSNDFKRESLSCFQTIKDSWKALDAQGNGQDGLLKLSKTFHLCKTIKNTGELSDWL 285
Query: 285 EKALIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGG 344
A Y +M+DYP P++F+ LP P++E+C ID G + RI + +YYN TG
Sbjct: 286 SSAYSYLAMVDYPMPADFMMPLPGNPIKELCTKIDNQPDGTSILERIYAGVNVYYNYTGT 345
Query: 345 LACFPGAGAEDDDPYGMFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLAT 404
+ CF +DDP+GM GW WQACTE++M MSY ++FP D FN T+Y C+ +
Sbjct: 346 VDCFD----LNDDPHGM-DGWDWQACTEMVMPMSYS--EDSMFPADKFNYTSYEKDCINS 398
Query: 405 TGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEPK 464
GV PRP WI + FGG++I VL+R GSNIIFFNGL DPWS GG+LK+IS S++A++ P
Sbjct: 399 FGVEPRPQWITTEFGGHNISLVLERFGSNIIFFNGLLDPWSGGGVLKNISESVVAIIAPL 458
Query: 465 GGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQYY 501
G HH+DLR ++K+DP+WL ++R E+ II+ WL YY
Sbjct: 459 GAHHIDLRPASKDDPDWLVRLRESELGIISGWLSDYY 495
>Os10g0511400 Peptidase S28 family protein
Length = 507
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 196/476 (41%), Gaps = 72/476 (15%)
Query: 54 ETRYFTQRLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGDVALFASNTGFM 113
E R+ Q LDHFN P + F+QRY ++ P+F+Y E ++ ++
Sbjct: 53 EERWMDQTLDHFN--PTDHRQFKQRYYEFLDYYRAPKGPIFLYICGESSCNGIPNS--YL 108
Query: 114 WEAAPRFRAMLVFVEHRYYGESLPFGGTRXXXXXXXXXXGYLTTAQALADFA------EL 167
A +F A +V EHRYYG+S PF +L++ QAL D A +
Sbjct: 109 AVMAKKFGAAVVSPEHRYYGKSSPF------ESLTTENLRFLSSKQALFDLAVFRQYYQE 162
Query: 168 ILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYSF 227
L+ K N + + +FGGSY G L+AW R+K+PH+ G++ASS +L + Y++
Sbjct: 163 TLNAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVVLSV------YNY 216
Query: 228 YNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTF--NMCKGNVDDIPGLVE 285
+ +S C L+ + + L + GR + Q F + + D + L +
Sbjct: 217 TDFDKQIGESAGPECKAALQETTKLVDGQLQS--GRNAVKQLFGASTLANDGDFLFLLAD 274
Query: 286 KALIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGG- 344
A I Y P + + ++ +G D V + YY T G
Sbjct: 275 AAAI---AFQYGNPDALCSPI-----------VEAKKNGTDLVETFARYVKDYYIGTFGA 320
Query: 345 -LACFPGAGAEDDDP---YGMFPGWTWQACTEV----IMTMSYGIGNATVFPPDPFNLTA 396
+A + ++ P + W +Q C+EV + + + +A + +L
Sbjct: 321 SVASYDQEYLKNTTPPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCR 380
Query: 397 YLAGCLATTGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNS 456
+ G GV P Y+GG I +GS I+F NG +DPW KS
Sbjct: 381 NVFG----EGVYPDVFMTNLYYGGTRI------AGSKIVFANGSQDPWRHASKQKSSKEL 430
Query: 457 IIALVE-------------PKGGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQ 499
L+E P+ H++ S PE + KVR+Q + I WL +
Sbjct: 431 PSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPEAVNKVRKQIVDHIDLWLSE 486
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,707,727
Number of extensions: 833048
Number of successful extensions: 1663
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1648
Number of HSP's successfully gapped: 4
Length of query: 511
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 406
Effective length of database: 11,553,331
Effective search space: 4690652386
Effective search space used: 4690652386
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)