BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0104400 Os11g0104400|D78505
(269 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment) 550 e-157
Os12g0104400 Fatty acid acyl-CoA desaturase family protein 537 e-153
Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment) 412 e-115
Os07g0693800 Similar to Fatty acid desaturase (Fragment) 400 e-112
Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2 154 7e-38
Os07g0416900 Similar to Omega-6 fatty acid desaturase, endo... 152 3e-37
Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fra... 151 4e-37
>Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment)
Length = 269
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT
Sbjct: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
Query: 61 LPFTLLAFPWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGPV 120
LPFTLLAFPWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGPV
Sbjct: 61 LPFTLLAFPWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGPV 120
Query: 121 PVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIH 180
PVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIH
Sbjct: 121 PVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIH 180
Query: 181 HDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDH 240
HDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDH
Sbjct: 181 HDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDH 240
Query: 241 FVSDVGDVVYYQTDHSLNGTDWAEDAKHK 269
FVSDVGDVVYYQTDHSLNGTDWAEDAKHK
Sbjct: 241 FVSDVGDVVYYQTDHSLNGTDWAEDAKHK 269
>Os12g0104400 Fatty acid acyl-CoA desaturase family protein
Length = 385
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/272 (97%), Positives = 266/272 (97%), Gaps = 3/272 (1%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIE+DESWHPITEKLY +LETRTKKLRFT
Sbjct: 114 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFT 173
Query: 61 LPFTLLAFP---WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 117
LPF LLAFP WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF
Sbjct: 174 LPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 233
Query: 118 GPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN 177
G VPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN
Sbjct: 234 GSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN 293
Query: 178 NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR 237
NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR
Sbjct: 294 NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR 353
Query: 238 VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK 269
VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK
Sbjct: 354 VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK 385
>Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment)
Length = 276
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/269 (72%), Positives = 222/269 (82%), Gaps = 4/269 (1%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
N+VVGH+LHS ILVPYHGWRISHRTHHQNHGH+E+DESW P++E+LY L+ TKKLRFT
Sbjct: 8 NSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYMTKKLRFT 67
Query: 61 LPFTLLAFPWY---RSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 117
+PF +LAFP Y RSPGK GSHF PSSDLF P EK DVI ST W M+ +L L V
Sbjct: 68 MPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGILAGLTFVM 127
Query: 118 GPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHND-LPWYRGEEWSYLRGGLTTVDRDYGWI 176
GP+ +L LY VPY++FVMWLD VTYLHHHGH D LPWYRG+EWSYLRGGLTT+DRDYGWI
Sbjct: 128 GPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWI 187
Query: 177 NNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSL 236
NN+HHDIGTHVIHHLFPQIPHYHLVEAT+AA+PVLG+YY+EPEKS PLP HL GVL +SL
Sbjct: 188 NNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLLGVLAKSL 247
Query: 237 RVDHFVSDVGDVVYYQTDHSLNGTDWAED 265
DH+VSD GDVVYYQTD + + + D
Sbjct: 248 NSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
>Os07g0693800 Similar to Fatty acid desaturase (Fragment)
Length = 413
Score = 400 bits (1027), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/258 (73%), Positives = 220/258 (85%), Gaps = 4/258 (1%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
N+V+GH+LHS ILVPYHGWRISHRTHHQNHGH+++DESWHP+ E+LY L T+ LRF+
Sbjct: 153 NSVMGHILHSSILVPYHGWRISHRTHHQNHGHVDKDESWHPLPERLYRSLNRATRMLRFS 212
Query: 61 LPFTLLAFP---WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 117
+PF +LA+P W RSPGK+GSHF PSSDLF P E++DV+ ST CW M +LL L +
Sbjct: 213 IPFPMLAYPFYLWSRSPGKSGSHFHPSSDLFQPNERNDVLTSTACWVAMAALLAGLTFLM 272
Query: 118 GPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHND-LPWYRGEEWSYLRGGLTTVDRDYGWI 176
GP+ +L LY VPY +FVMWLD VTYLHHHGHND LPWYRG+EWSYLRGGLTTVDRDYGWI
Sbjct: 273 GPLLMLNLYFVPYWIFVMWLDFVTYLHHHGHNDKLPWYRGKEWSYLRGGLTTVDRDYGWI 332
Query: 177 NNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSL 236
NNIHHDIGTHVIHHLFPQIPHYHL+EAT+AA+ V+G+YYREP+KSGP PLHLFG L RSL
Sbjct: 333 NNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKGVMGKYYREPDKSGPFPLHLFGALSRSL 392
Query: 237 RVDHFVSDVGDVVYYQTD 254
+ DH+VSD GDVVYYQTD
Sbjct: 393 KRDHYVSDTGDVVYYQTD 410
>Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2
Length = 382
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 131/234 (55%), Gaps = 23/234 (9%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESW-----------------HPIT 43
+N+VG +LHS +L P+ W+ SHR HH N G +E+DE + +P+
Sbjct: 119 DNLVGLVLHSALLTPFFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVG 178
Query: 44 EKLYWQLETRTKKLRFTLPFTLLAFPWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCW 103
+Y L+ T L F L P+ P H+ P S LFS +E+ V+VS
Sbjct: 179 RLVYIALQL-TLAWPLYLAFNLSGQPY---PRLVTCHYDPYSPLFSDQERVQVLVSDAAI 234
Query: 104 CIMISLLVALACVFGPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLR 163
++ L L +G V+ +YGVP ++ L+TYLHH H LP Y EW +LR
Sbjct: 235 LAVLLALHRLTAAYGLWWVVRVYGVPVMIVGALFVLITYLHH-THRALPHYDSSEWEWLR 293
Query: 164 GGLTTVDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 216
G L TVDRDYG +N + H++ THV+HHLFP +PHYH +EAT+AARPVLG YY+
Sbjct: 294 GSLATVDRDYGVLNRVLHNVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYK 347
>Os07g0416900 Similar to Omega-6 fatty acid desaturase, endoplasmic reticulum
isozyme 2 (EC 1.14.19.-)
Length = 390
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 128/231 (55%), Gaps = 16/231 (6%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHP-ITEKLYW----------- 48
++ +G +LHS++L PY W+ +H+ HH N ERDE + P L W
Sbjct: 126 DDTLGLVLHSWLLAPYFSWKYTHQRHHSNTSSQERDEVFVPRFKSDLPWYSPYVYKYNNP 185
Query: 49 --QLETRTKKLRFTLPFTLLAFPWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIM 106
+L +L P L+ W R + SHF PS ++ +E+ + +S +
Sbjct: 186 VARLLLLVVQLTVGWPMYLVFNTWGRQYPRFASHFDPSGPIYKGRERVFIAISDIGMLAV 245
Query: 107 ISLLVALACVFGPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGL 166
L LA +G V+ +YGVP LV WL +VTYLHH H +P Y EW +LRG L
Sbjct: 246 SLALYRLAEGYGFWWVVRVYGVPLLVVNAWLVVVTYLHH-THRAIPHYDSSEWDWLRGAL 304
Query: 167 TTVDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 216
TVDRDY ++N + H+I THV+HHLFP IPHYH VEATKA RP+LG YY+
Sbjct: 305 ATVDRDYSFLNRVFHNITDTHVVHHLFPTIPHYHAVEATKAIRPILGEYYQ 355
>Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fragment)
Length = 388
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 126/229 (55%), Gaps = 14/229 (6%)
Query: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEK-LYWQLE----TRTK 55
+++VG +LHS +LVPY W+ SHR HH N G +ERDE + P + + W
Sbjct: 126 DDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIG 185
Query: 56 KLRFTLPFTLLAFPWYRSPGKTG-------SHFLPSSDLFSPKEKSDVIVSTTCWCIMIS 108
+L L +P Y + +G HF P +++ +E+ + +S
Sbjct: 186 RLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGL 245
Query: 109 LLVALACVFGPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTT 168
L L+ FG V+ +YGVP L+ WL L+TYL H H LP Y EW +LRG L T
Sbjct: 246 ALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQH-THPALPHYDSSEWDWLRGALAT 304
Query: 169 VDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 216
VDRDYG +N + H+I THV HHLF +PHYH +EATKA RP+LG YY+
Sbjct: 305 VDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.142 0.485
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,631,033
Number of extensions: 474430
Number of successful extensions: 1343
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1330
Number of HSP's successfully gapped: 7
Length of query: 269
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 170
Effective length of database: 11,866,615
Effective search space: 2017324550
Effective search space used: 2017324550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)