BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0557900 Os10g0557900|J065019I07
(355 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0557900 Peptidase M10A and M12B, matrixin and adamalys... 583 e-167
Os06g0239100 Peptidase M10A and M12B, matrixin and adamalys... 224 7e-59
Os02g0740700 Peptidase M10A and M12B, matrixin and adamalys... 219 2e-57
Os10g0558150 199 2e-51
Os10g0558100 170 1e-42
>Os10g0557900 Peptidase M10A and M12B, matrixin and adamalysin family protein
Length = 355
Score = 583 bits (1504), Expect = e-167, Method: Compositional matrix adjust.
Identities = 296/355 (83%), Positives = 296/355 (83%)
Query: 1 MFLCRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWHSFKQLLDAGRGSHVTGLAELKRY 60
MFLCRR WHSFKQLLDAGRGSHVTGLAELKRY
Sbjct: 1 MFLCRRAAAASCLVAAVAMVVVLGLPVVHGHGGVAWHSFKQLLDAGRGSHVTGLAELKRY 60
Query: 61 LARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSPRCGVGDDD 120
LARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSPRCGVGDDD
Sbjct: 61 LARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSPRCGVGDDD 120
Query: 121 VERPVSVALSPGAQGGVVSRFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPXXXXXX 180
VERPVSVALSPGAQGGVVSRFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPP
Sbjct: 121 VERPVSVALSPGAQGGVVSRFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPAAVRAV 180
Query: 181 XXXXXXXXXXTIPVGFVETDDYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRL 240
TIPVGFVETDDYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRL
Sbjct: 181 FQRAFARWARTIPVGFVETDDYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRL 240
Query: 241 HLDASEHWAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRL 300
HLDASEHWAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRL
Sbjct: 241 HLDASEHWAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRL 300
Query: 301 TVDDVEGVQALYGSNPQFXXXXXXXXXXXXXXPRRLLAGSARLLCTVLVILVTQL 355
TVDDVEGVQALYGSNPQF PRRLLAGSARLLCTVLVILVTQL
Sbjct: 301 TVDDVEGVQALYGSNPQFSLSSLSEQGTSSSSPRRLLAGSARLLCTVLVILVTQL 355
>Os06g0239100 Peptidase M10A and M12B, matrixin and adamalysin family protein
Length = 371
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/290 (44%), Positives = 163/290 (56%), Gaps = 13/290 (4%)
Query: 36 WHSFKQLLDAGRGSHVTGLAELKRYLARFGYMAKPGRDT-----TDAFDEHLEVAVRRYQ 90
W +FK L G GL +LK YL FGY++ P + D FD +E+A++ YQ
Sbjct: 44 WSAFKNLSGCHFGDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQ 103
Query: 91 TRFSLPVTGRLDNATLDQIMSPRCGVGDDDVERPVSVALSPGAQGGVVSRFTFFKGEPRW 150
F L VTG LD AT+ Q+M+PRCGV D V S + G +++F G PRW
Sbjct: 104 GNFGLDVTGDLDAATVSQMMAPRCGVAD--VVNGTST-MGGGGGVRGRGLYSYFPGSPRW 160
Query: 151 TRSDPPIVLSYAVSPTATVGYLPPXXXXXXXXXXXXXXXXTIPVGFVETDDYEAADIKVG 210
RS L YA++ T+ T + F E ADI +G
Sbjct: 161 PRSR--TTLRYAITATSQTSIDRATLSKVFASAFARWSAATT-LNFTEAASAADADITIG 217
Query: 211 FYAGNHGDGVPFDGPLGILGHAFSPKNGRLHLDASEHWAVDFDVDATAS--AIDLESVAT 268
FY G+HGDG FDGPLG L HAFSP NGRLHLDASE W DV +S A+DLESVA
Sbjct: 218 FYGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNAAVDLESVAV 277
Query: 269 HEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEGVQALYGSNPQF 318
HEIGH+LGLGHS++ ++M+P++ R KKV L DDV G+Q LYG+NP F
Sbjct: 278 HEIGHILGLGHSSAADSIMFPTLTSRTKKVNLATDDVAGIQGLYGNNPNF 327
>Os02g0740700 Peptidase M10A and M12B, matrixin and adamalysin family protein
Length = 372
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 165/295 (55%), Gaps = 22/295 (7%)
Query: 36 WHSFKQLLDAGRGSHVTGLAELKRYLARFGYMAKPGRDT--TDAFDEHLEVAVRRYQTRF 93
W +F+ L G GL LK YL+ FGY+ P + +DAFD+ LE A+ YQ F
Sbjct: 44 WSAFQNLSGCHAGEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNF 103
Query: 94 SLPVTGRLDNATLDQIMSPRCGVGD-----DDVERPVSVALSPGAQGGVVSRFTFFKGEP 148
L TG LD T+DQ+++PRCGV D ++R S A G +++F G P
Sbjct: 104 GLNATGELDTDTVDQMVAPRCGVADVINGTSTMDRNSSAAALRGRH-----LYSYFPGGP 158
Query: 149 RWTRSDPPI--VLSYAVSPTATVGYLPPXXXXXXXXXXXXXXXXTIPVGFVETDDYEAAD 206
W PP L YA++ T+ + + F E AD
Sbjct: 159 MW----PPFRRNLRYAITATSATS-IDRATLSAVFARAFSRWAAATRLQFTEVSSASNAD 213
Query: 207 IKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRLHLDASEHWAVDFDVDATAS---AIDL 263
I +GFY+G+HGDG FDGPLG L HAFSP +GR HLDA+E W DV ++S A+DL
Sbjct: 214 ITIGFYSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWVASGDVSTSSSFGTAVDL 273
Query: 264 ESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEGVQALYGSNPQF 318
ESVA HEIGH+LGLGHS+ P ++MYP+I+ +KV L DDV G+Q+LYG+NP F
Sbjct: 274 ESVAVHEIGHLLGLGHSSVPDSIMYPTIRTGTRKVDLESDDVLGIQSLYGTNPNF 328
>Os10g0558150
Length = 261
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 125/191 (65%), Gaps = 6/191 (3%)
Query: 134 QGGVVSRFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPXXXXXXXXXXXXXXXXTIP 193
GGVVSR+ F+ G+PRWTR P+VL+YAVS T VGYLP IP
Sbjct: 41 HGGVVSRYAFWTGKPRWTRHGRPMVLTYAVSHTDAVGYLPGDAVLAVFRSAFARWAEVIP 100
Query: 194 VGFVETDDYEAAD-----IKVGFY-AGNHGDGVPFDGPLGILGHAFSPKNGRLHLDASEH 247
V F E + A I+VGFY AG HGDG PFDGPL + HA P++GR+ DA+E
Sbjct: 101 VSFAEITTEDDAAAAEADIRVGFYGAGEHGDGHPFDGPLNVYAHATGPEDGRIDFDAAER 160
Query: 248 WAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEG 307
WAVD DA+ +A+DLE+VATHEIGH LGL HS S +VMYP + RE+KVRLTVDDVEG
Sbjct: 161 WAVDLAADASPAAVDLETVATHEIGHALGLDHSTSESSVMYPYVGTRERKVRLTVDDVEG 220
Query: 308 VQALYGSNPQF 318
+Q LYG NP F
Sbjct: 221 IQELYGVNPSF 231
>Os10g0558100
Length = 624
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 115/191 (60%), Gaps = 15/191 (7%)
Query: 141 FTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPXXXXXXXXXXXXXXXXTIPVGFVETD 200
FTFF G+PRWTR P VL+YAVSPTAT +LPP IP+ F+E +
Sbjct: 21 FTFFPGKPRWTR--PDRVLTYAVSPTATADHLPPSAVRAALRSAFARWADVIPMRFLEAE 78
Query: 201 DYEAADIKVGFYAGNHG--DGVPFDGPL----------GILGHAFSP-KNGRLHLDASEH 247
Y+AADIKVGFY G DG G+L H+ P K+G++HL A+
Sbjct: 79 RYDAADIKVGFYLYTDGRCDGCACIDSDDDDDDGDDCEGVLAHSSMPEKSGQIHLHAAHR 138
Query: 248 WAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEG 307
W V+ D A+DLESVA HEIGHVLGL HS+S ++MYP I RE+KVRLT DDV G
Sbjct: 139 WTVNLAADTAPLAVDLESVAAHEIGHVLGLDHSSSRSSMMYPFISCRERKVRLTTDDVHG 198
Query: 308 VQALYGSNPQF 318
+Q LYG+NP F
Sbjct: 199 IQELYGANPHF 209
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 123/248 (49%), Gaps = 20/248 (8%)
Query: 80 EHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSPRCGVGDDDVERPVSVALSPGAQGGVVS 139
E+L + RY T + V +L T M CG G +P + GG +
Sbjct: 330 ENLNPCIARYVTTINTLVL-QLTGGTYTYTMFLLCGCGTGS--QPTRLRSQDNNGGGGAA 386
Query: 140 RFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPXXXXXXXXXXXXXXXXTIPVGFVET 199
FTF G PRW R P + L+YAVSP AT +LP P+ F E
Sbjct: 387 AFTFLWGRPRWNR--PDMRLTYAVSPLATADHLPRDAVREAFRSALARWAEVTPLRFAEA 444
Query: 200 DDYEAADIKVGFYAGNHGDG-------VPFDGPLGILGHAFSPKNGRLHLDASEHWAVDF 252
YE ADI+VGFY + DG V G L HA P++GR+HL A+ WAV
Sbjct: 445 ARYEEADIRVGFYL-HTADGKCDACGCVCKGGGEEALAHAHPPQDGRIHLHAARKWAVTN 503
Query: 253 DV----DATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEGV 308
DA A+DLESVA HEIGH LGLGHS+S ++MY + KV LT DDV+GV
Sbjct: 504 VAGAGGDAPPLAVDLESVAVHEIGHALGLGHSSSESSMMYRHYR---GKVSLTDDDVKGV 560
Query: 309 QALYGSNP 316
Q LYG+ P
Sbjct: 561 QELYGAKP 568
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,964,427
Number of extensions: 462811
Number of successful extensions: 883
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 866
Number of HSP's successfully gapped: 6
Length of query: 355
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 253
Effective length of database: 11,709,973
Effective search space: 2962623169
Effective search space used: 2962623169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)