Os02g0740700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M10A and M12B, matrixin and adamalysin family protein.
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Os02g0740700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M10A and M12B, matrixin and adamalysin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.35 | 0.447 | 8.23 | 0.154 | 0.867 | -0.649 | -0.598 | 0.405 | 0.159 | 6.62 | 0.7648 | 54 | -- | -- |
| 91.21 | 0.445 | 8.23 | 0.167 | 0.867 | -0.632 | -0.735 | -- | 0.156 | 6.81 | 0.7448 | 55 | -- | -- |
| 91.18 | 0.445 | 8.23 | 0.14 | 0.862 | -0.661 | -- | 0.451 | 0.156 | 6.53 | 0.7566 | 54 | -- | -- |
| 92.67 | 0.448 | 8.23 | 0.149 | 0.872 | -0.662 | -- | -- | 0.16 | 6.58 | 0.77 | 54 | -- | -- |
| 124.18 | 0.522 | 8.24 | 0.14 | -- | -0.755 | -- | 0.576 | 0.181 | -- | 0.7566 | 54 | -- | -- |
| 98.72 | 0.466 | 8.2 | 0.209 | 1.24 | -- | -0.839 | -- | 0.185 | 9.11 | -- | -- | -- | -- |
| 101.18 | 0.471 | 8.21 | 0.18 | 1.24 | -- | -- | -- | 0.185 | 9.14 | -- | -- | -- | -- |
| 126.34 | 0.526 | 8.24 | 0.148 | -- | -0.752 | -- | -- | 0.185 | -- | 0.77 | 54 | -- | -- |
| 93.27 | 0.45 | 8.23 | -- | 0.87 | -0.665 | -- | -- | 0.15 | 6.55 | 0.75 | 54 | -- | -- |
| 189.89 | 0.644 | 8.24 | 0.176 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 102.03 | 0.473 | 8.21 | -- | 1.24 | -- | -- | -- | 0.165 | 9.13 | -- | -- | -- | -- |
| 123.95 | 0.52 | 8.25 | -- | -- | -0.769 | -- | -- | 0.125 | -- | 0.03949 | 3 | -- | -- |
| 190.71 | 0.645 | 8.24 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.59 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 16 |
| 2 | 86.60 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 4 | 86.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 12 | 87.15 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 13 | 87.15 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 14 | 87.18 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 15 | 87.20 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 22 | 87.39 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 25 | 87.54 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 27 | 87.57 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 34 | 87.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 38 | 87.87 | radiation | 1.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 44 | 87.95 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 45 | 87.95 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 46 | 87.96 | humidity | 80.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 48 | 87.97 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 51 | 88.05 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 61 | 88.18 | wind | 3.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 64 | 88.21 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 70 | 88.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 74 | 88.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 76 | 88.34 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 77 | 88.34 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 79 | 88.36 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 81 | 88.36 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 2 |
| 82 | 88.38 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 85 | 88.42 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 103 | 88.47 | wind | 3.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 128 | 88.59 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 138 | 88.68 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 141 | 88.69 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 143 | 88.71 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 146 | 88.74 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 162 | 88.82 | wind | 5.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 166 | 88.85 | radiation | 20.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 176 | 88.93 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 184 | 89.00 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 190 | 89.02 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 194 | 89.04 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 196 | 89.04 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 197 | 89.04 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 200 | 89.04 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 201 | 89.04 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 204 | 89.04 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 207 | 89.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 209 | 89.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 212 | 89.07 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 221 | 89.11 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 227 | 89.13 | wind | 5.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 228 | 89.14 | wind | 5.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 240 | 89.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 248 | 89.25 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 9 |
| 263 | 89.32 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 276 | 89.39 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 278 | 89.40 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 290 | 89.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 18 | 12 |
| 297 | 89.46 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 305 | 89.48 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 18 | 13 |
| 318 | 89.52 | temperature | 30.0 | 270 | > th | dose independent | rect. | 14 | 2 |
| 319 | 89.53 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 323 | 89.54 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 328 | 89.55 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 342 | 89.59 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 345 | 89.59 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 349 | 89.61 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 352 | 89.62 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 354 | 89.62 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 360 | 89.63 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 361 | 89.64 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 363 | 89.65 | radiation | 30.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 366 | 89.67 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 369 | 89.68 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 376 | 89.70 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 377 | 89.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 3 |
| 379 | 89.71 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 380 | 89.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 393 | 89.72 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 399 | 89.73 | temperature | 15.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 403 | 89.74 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 410 | 89.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 412 | 89.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 413 | 89.76 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 415 | 89.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 416 | 89.76 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 418 | 89.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 439 | 89.79 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 459 | 89.81 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 461 | 89.81 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 462 | 89.81 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 464 | 89.81 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 465 | 89.81 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 466 | 89.81 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 3 |
| 469 | 89.81 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 472 | 89.81 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 473 | 89.81 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 477 | 89.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 478 | 89.83 | humidity | 60.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 479 | 89.83 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 481 | 89.83 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 495 | 89.86 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 12 |
| 501 | 89.89 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 503 | 89.89 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 504 | 89.89 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 519 | 89.94 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 524 | 89.95 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 536 | 89.98 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 537 | 89.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 21 |
| 539 | 89.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 543 | 90.00 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 567 | 90.05 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 568 | 90.05 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 22 |
| 569 | 90.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 23 |
| 570 | 90.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 590 | 90.08 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 12 |
| 592 | 90.09 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 10 |
| 597 | 90.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 600 | 90.11 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 601 | 90.11 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 603 | 90.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 610 | 90.12 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 618 | 90.15 | radiation | 1.0 | 90 | < th | dose independent | rect. | 18 | 16 |
| 624 | 90.16 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 629 | 90.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 647 | 90.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 650 | 90.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 654 | 90.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 656 | 90.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 657 | 90.20 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 669 | 90.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 679 | 90.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 682 | 90.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 683 | 90.21 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 686 | 90.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 691 | 90.22 | wind | 7.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 702 | 90.25 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 12 |
| 710 | 90.26 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 721 | 90.27 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 739 | 90.28 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 740 | 90.28 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 757 | 90.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 787 | 90.36 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 791 | 90.37 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 801 | 90.39 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 906 | 90.49 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 16 |
| 929 | 90.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 13 |
| 934 | 90.50 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 939 | 90.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 943 | 90.51 | wind | 9.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 958 | 90.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 12 |