BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0419500 Os10g0419500|AK071316
         (184 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0419500  Similar to SIPL                                     380   e-106
Os03g0161800  Similar to SIPL                                     219   8e-58
Os10g0419400  Similar to SIPL                                     207   3e-54
Os04g0345800                                                      175   1e-44

>Os10g0419500 Similar to SIPL
          Length = 184

 Score =  380 bits (977), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MAHLVWMLGENGEEKSFENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYS 60
           MAHLVWMLGENGEEKSFENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYS
Sbjct: 1   MAHLVWMLGENGEEKSFENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYS 60

Query: 61  YFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEG 120
           YFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEG
Sbjct: 61  YFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEG 120

Query: 121 DMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFA 180
           DMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFA
Sbjct: 121 DMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFA 180

Query: 181 LAAH 184
           LAAH
Sbjct: 181 LAAH 184



>Os03g0161800 Similar to SIPL
          Length = 198

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 99/177 (55%), Positives = 134/177 (75%), Gaps = 3/177 (1%)

Query: 5   VWMLGENGEEKSFEN---PNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYSY 61
            W + ++ E++   +   P E +PLS+L E+G+L W L+    E++E L KIR  RGYSY
Sbjct: 15  AWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSY 74

Query: 62  FDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEGD 121
            D+ ++CP+KL NYE KLK+F+ EH+H DEEIRYCLEGSGYFDVRD++D+WIR+ +K+G 
Sbjct: 75  MDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGG 134

Query: 122 MIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTG 178
           MI+LPAG+YHRF +DS+NYIK MRLF+GEPVWT YNRP +  P R+EYV+ +    G
Sbjct: 135 MIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINRGG 191



>Os10g0419400 Similar to SIPL
          Length = 199

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 93/177 (52%), Positives = 131/177 (74%), Gaps = 3/177 (1%)

Query: 5   VWMLGENGEEKSFEN---PNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYSY 61
            W + ++ E++   +   P E + + +L E+GV+ W L+P   E+ E L +IR  RGYSY
Sbjct: 15  AWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSY 74

Query: 62  FDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEGD 121
            D+ ++CP+KL NYE K+KSF+ EH+H DEEIRYCLEGSGYFDVRD++D+WIRI +K+G 
Sbjct: 75  VDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGG 134

Query: 122 MIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTG 178
           MI+LPAG+YHRF +D++NYIK MRLF+G+PVWT YNRP +  P R+E++  +    G
Sbjct: 135 MIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEG 191



>Os04g0345800 
          Length = 294

 Score =  175 bits (444), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 108/145 (74%)

Query: 33  GVLYWHLDPKKSESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEE 92
           G++   LD    E +E L  +R +RGY + D+ E+ P+K+ NYE  +K F+ EH+H DEE
Sbjct: 125 GLVAMRLDADNHEHDENLKIMREQRGYLHMDIVELTPEKMPNYEVMIKRFFEEHLHTDEE 184

Query: 93  IRYCLEGSGYFDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPV 152
           +RYCL+GSGYFDVRD++DKW+R+ +++G +I++PAGIYHRF +D+NNYIK MRLF G P 
Sbjct: 185 VRYCLDGSGYFDVRDENDKWVRVSVRKGALIVVPAGIYHRFTLDTNNYIKTMRLFSGGPD 244

Query: 153 WTAYNRPQEDHPVRQEYVKNVKGDT 177
           WTAYNRP +  P R++Y++ +   T
Sbjct: 245 WTAYNRPHDHLPERKKYLEALHNRT 269



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.140    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,253,768
Number of extensions: 318773
Number of successful extensions: 657
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 657
Number of HSP's successfully gapped: 4
Length of query: 184
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 89
Effective length of database: 12,075,471
Effective search space: 1074716919
Effective search space used: 1074716919
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)