BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0370500 Os10g0370500|AK065000
(510 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0370500 Actin-crosslinking proteins family protein 983 0.0
Os10g0370800 Similar to Exo-1,3-beta-glucanase precursor (E... 702 0.0
Os05g0244500 Glycoside hydrolase, family 5 protein 667 0.0
>Os10g0370500 Actin-crosslinking proteins family protein
Length = 510
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/510 (94%), Positives = 481/510 (94%)
Query: 1 MRHFEXXXXXXXXXXXXXXVSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDD 60
MRHFE VSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDD
Sbjct: 1 MRHFELLLFLLLCSPCLFSVSDGRTVRPAKRGAPSPPIRAVNLGGWLVTEGWILPSLFDD 60
Query: 61 IPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRV 120
IPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRV
Sbjct: 61 IPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSASGWETFKLWRIDEDTFDLRV 120
Query: 121 FDNLFXXXXXXXXXXXXXXXSPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTAD 180
FDNLF SPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTAD
Sbjct: 121 FDNLFVTVAGDGVTVVATVASPGPGEAFQIVRNGDKTRARIRAPNGMFLQAKTSDSVTAD 180
Query: 181 YDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFIST 240
YDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFIST
Sbjct: 181 YDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAKATQVLREHWRTYIVESDFKFIST 240
Query: 241 SGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPF 300
SGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPF
Sbjct: 241 SGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFKWAEKYNLGVIVDLHAAPGSQNPF 300
Query: 301 EHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMR 360
EHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMR
Sbjct: 301 EHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSPSLLAVELLNEPLAPGVTLPALMR 360
Query: 361 YYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTV 420
YYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTV
Sbjct: 361 YYKDGYNAVRKYTSTAYVVMSNRLSASNTELLGFAAGFPGAVLDVHYYNLFTSSFNGLTV 420
Query: 421 DQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRAT 480
DQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRAT
Sbjct: 421 DQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWNVQGASNQDYQRFAQAQLDVYGRAT 480
Query: 481 FGWAYWTYKNVNNHWSMQWNIQNGIISLKS 510
FGWAYWTYKNVNNHWSMQWNIQNGIISLKS
Sbjct: 481 FGWAYWTYKNVNNHWSMQWNIQNGIISLKS 510
>Os10g0370800 Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment)
Length = 1449
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/478 (71%), Positives = 385/478 (80%), Gaps = 4/478 (0%)
Query: 35 SPPIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILV 94
SPPIR+VNLGGWLVTEGWILPSLFD IPN DLLDGT L KSV Q+ YL AEQGGG +V
Sbjct: 972 SPPIRSVNLGGWLVTEGWILPSLFDGIPNNDLLDGTTLHIKSVIQDKYLAAEQGGGQTIV 1031
Query: 95 ANRTSASGWETFKLWRIDEDTFDLRVFDNLFXXXXXXXXXXXXXXXSPGPGEAFQIVR-N 153
ANR AS WE+F LWR+DE TF+LRVF F +PG E FQIVR +
Sbjct: 1032 ANRVVASDWESFTLWRVDETTFNLRVFKKQFMGIDSNGTVIATAT-TPGLSETFQIVRSD 1090
Query: 154 GDKTRARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNGY 213
DK R RIRAPNG FLQAKT++SVTADY TNWG+DDPSVF+V VGG QGEYQICNGY
Sbjct: 1091 TDKNRVRIRAPNGSFLQAKTANSVTADYGESTNWGNDDPSVFIVDMVGGPQGEYQICNGY 1150
Query: 214 GKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALD 273
G KA+QVLREHW TYIVESDF+FIS+SGLNAVRIPVGWWIASDPNPPAPFVGGSLQALD
Sbjct: 1151 GAEKASQVLREHWSTYIVESDFEFISSSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALD 1210
Query: 274 NAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHRY 333
NAFKWAE YN+GVIVDLHAAPGSQN +EHSA+RDGS +WGTTD +I QTVQ+IDFL RY
Sbjct: 1211 NAFKWAENYNIGVIVDLHAAPGSQNHWEHSATRDGSLEWGTTDTSITQTVQIIDFLASRY 1270
Query: 334 ASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSA-SNTELL 392
A+SPSLLA+ELLNEP P V L L +YY+D YN VRKYT+ AYV+MSNRL+ SNTELL
Sbjct: 1271 ANSPSLLAIELLNEPWGPDVPLEKLKKYYEDAYNVVRKYTAKAYVIMSNRLAGESNTELL 1330
Query: 393 GFAAGFPGAVLDVHYYNLFT-SSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEW 451
FA+ FPG V+DVHYYNLF +F L V+QNI++V+ +R E S +T+ PLTFVGEW
Sbjct: 1331 DFASRFPGVVIDVHYYNLFNDDTFKNLNVEQNIEFVKNSRKAEFSNITKQKSPLTFVGEW 1390
Query: 452 VAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISLK 509
AEW V GAS ++YQRFAQAQLDVYGRATFGWAYW +KNVNNHWS++W I+NG ISLK
Sbjct: 1391 AAEWKVNGASKEEYQRFAQAQLDVYGRATFGWAYWNFKNVNNHWSLEWMIKNGYISLK 1448
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/478 (70%), Positives = 383/478 (80%), Gaps = 2/478 (0%)
Query: 34 PSPPIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTIL 93
P PIRAVNLGGWLVTEGWI PSLFD I NKDLLDGTQLQFKSVT NMYL AE GGG+ +
Sbjct: 491 PKLPIRAVNLGGWLVTEGWIKPSLFDGISNKDLLDGTQLQFKSVTNNMYLAAENGGGSAI 550
Query: 94 VANRTSASGWETFKLWRIDEDTFDLRVFDNLFXXXXXXXXXXXXXXXSPGPGEAFQIVR- 152
VANR ASGWETFKLWRI+E TF+LRVF+N F PGP E FQI+R
Sbjct: 551 VANREKASGWETFKLWRINETTFNLRVFNNQFVSIGGNGAVIATATV-PGPNETFQIIRL 609
Query: 153 NGDKTRARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNG 212
+ DK+R RIRAPNG FLQ K SVTAD+ TNWG+DDPSVFVV + GLQGEYQICNG
Sbjct: 610 DSDKSRMRIRAPNGKFLQVKAMGSVTADHGASTNWGNDDPSVFVVNNIYGLQGEYQICNG 669
Query: 213 YGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQAL 272
Y AT+VLREHW T+IVE DFKFIS++GLNAVRIPVGWWIASDPNPPAPFVGGSLQAL
Sbjct: 670 YSAGNATEVLREHWNTFIVEDDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGGSLQAL 729
Query: 273 DNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHR 332
DNAFKWAEKYN+G+IVDLHAAPGSQN +HSASRDGS +WGT+ ANIAQTV VIDFL R
Sbjct: 730 DNAFKWAEKYNIGIIVDLHAAPGSQNRLDHSASRDGSLEWGTSAANIAQTVGVIDFLASR 789
Query: 333 YASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASNTELL 392
YA S SLLA+ELLNEPLAP V + L +YY+D YNAVRKYT AYV++S R+S TE L
Sbjct: 790 YAKSSSLLAIELLNEPLAPDVPVDTLTKYYQDAYNAVRKYTLQAYVILSTRMSGDPTEFL 849
Query: 393 GFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEWV 452
A+ GAV+DVHYYNL+ S F+ TV+QNI++VR NRS +++TVT+ N PLTFVGEWV
Sbjct: 850 SVASSLFGAVIDVHYYNLYNSMFDNYTVEQNINFVRNNRSSDINTVTKQNVPLTFVGEWV 909
Query: 453 AEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISLKS 510
AEW V AS +DYQ FAQAQLD+YG+ATFGW+YWT+KNV NHWSM+W I+NG ISL +
Sbjct: 910 AEWYVDNASKEDYQNFAQAQLDLYGKATFGWSYWTFKNVKNHWSMEWMIKNGYISLNN 967
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/472 (70%), Positives = 382/472 (80%), Gaps = 4/472 (0%)
Query: 41 VNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYLCAEQGGGTILVANRTSA 100
VNLGGWLVTEGWILPSLFDDIPN D LDGT+LQFKSV N YLCAE GGG I+VA+RT+A
Sbjct: 17 VNLGGWLVTEGWILPSLFDDIPNNDFLDGTKLQFKSVVHNTYLCAEHGGGDIVVADRTAA 76
Query: 101 SGWETFKLWRIDEDTFDLRVFDN--LFXXXXXXXXXXXXXXXSPGPGEAFQIVRNG-DKT 157
SGWETFKLWR+DE+TF+L+ D+ + +PGP E F IVR+ D +
Sbjct: 77 SGWETFKLWRVDENTFNLKAIDDSAVHFVGVDGNGVVVATAATPGPSETFVIVRSDRDNS 136
Query: 158 RARIRAPNGMFLQAKTSDSVTADYDGETNWGDDDPSVFVVTRVGGLQGEYQICNGYGKAK 217
R RIRA NG FLQAKT+ SVTAD+ T+WGDDDPSVF + R LQGEYQ+CNGYG K
Sbjct: 137 RIRIRASNGKFLQAKTTVSVTADHGEGTSWGDDDPSVFAINRGEKLQGEYQLCNGYGMKK 196
Query: 218 ATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSLQALDNAFK 277
AT+VLREHW TYI+E+DFKFIS++GLNAVRIPVGWWIASDPNPPAPFVGGSL+ALDNAF+
Sbjct: 197 ATEVLREHWSTYILENDFKFISSNGLNAVRIPVGWWIASDPNPPAPFVGGSLEALDNAFR 256
Query: 278 WAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFLTHRYASSP 337
WAEKYNLGVIVDLHAAPGSQNP+EHS SRDGSQ WGTTD I QTVQVIDFL RYA SP
Sbjct: 257 WAEKYNLGVIVDLHAAPGSQNPWEHSGSRDGSQTWGTTDETIIQTVQVIDFLASRYAKSP 316
Query: 338 SLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSAS-NTELLGFAA 396
SLLAVELLNEPLAP V+ L +YY+D YNAVRKYTS AYV+MSN ++A + E+L FA
Sbjct: 317 SLLAVELLNEPLAPKVSAGMLKKYYQDAYNAVRKYTSDAYVIMSNPINADYSNEILQFAG 376
Query: 397 GFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFVGEWVAEWN 456
GF GAV DVHYYN+F SF+ T + NI +VR +RS EL +VT+ NGPLT+VGEWVAEW
Sbjct: 377 GFFGAVFDVHYYNMFNGSFDNTTAEWNIQFVRNDRSAELRSVTKQNGPLTYVGEWVAEWK 436
Query: 457 VQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISL 508
V AS +DY+RFAQAQLDVY +ATFGWAYW++K+V NHWS++W I+NG ISL
Sbjct: 437 VNNASEEDYKRFAQAQLDVYSQATFGWAYWSFKHVQNHWSLEWMIKNGYISL 488
>Os05g0244500 Glycoside hydrolase, family 5 protein
Length = 525
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/482 (69%), Positives = 383/482 (79%), Gaps = 8/482 (1%)
Query: 37 PIRAVNLGGWLVTEGWILPSLFDDIPNKDLLDGTQLQFKSVTQNMYL-CAEQGGGTILVA 95
P+RAV LGGWLVTEGWILPSLFD IPNKDLLDG QLQ K+V YL A+QGG +VA
Sbjct: 44 PVRAVCLGGWLVTEGWILPSLFDAIPNKDLLDGAQLQLKAVAAGAYLTAADQGGAAAVVA 103
Query: 96 NRTSA--SGWETFKLWRIDEDTFDLRVFDNLFXXX-XXXXXXXXXXXXSPGPGEAFQIVR 152
NRT A S ETFKLWRI+E TF+ R F +PGP E FQ+VR
Sbjct: 104 NRTQAAPSASETFKLWRINETTFNFRASSGRFVGAGSDGGAAVVAVAAAPGPSETFQVVR 163
Query: 153 N-GDKTRARIRAPNGMFLQ-AKTSDSVTADYDGE-TNWGDDDPSVFVVTRVGGLQGEYQI 209
+ GDK+R RIRAPNG FLQ A S+SVTADY GE T+WGDDDPSVFVVT+V LQGEYQI
Sbjct: 164 DDGDKSRVRIRAPNGHFLQIALGSNSVTADYYGESTSWGDDDPSVFVVTKVLELQGEYQI 223
Query: 210 CNGYGKAKATQVLREHWRTYIVESDFKFISTSGLNAVRIPVGWWIASDPNPPAPFVGGSL 269
CNGYG AKAT +LR HW TYIVE DFKFIS SGL AVRIPVGWWIASDPNPPAP+VGGSL
Sbjct: 224 CNGYGTAKATPILRNHWSTYIVEDDFKFISASGLTAVRIPVGWWIASDPNPPAPYVGGSL 283
Query: 270 QALDNAFKWAEKYNLGVIVDLHAAPGSQNPFEHSASRDGSQDWGTTDANIAQTVQVIDFL 329
Q LDNAFKWAEKY LGVI+DLHAAPGSQNP+EHS+SRDG+Q+WGT+DANIA+TVQVIDFL
Sbjct: 284 QTLDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTSDANIAETVQVIDFL 343
Query: 330 THRYASSPSLLAVELLNEPLAPGVTLPALMRYYKDGYNAVRKYTSTAYVVMSNRLSASN- 388
RYA SPSLLAVEL+NEP AP TL +LM+YY DGYNAVRKY+STAYV+MSNRL +
Sbjct: 344 ASRYAKSPSLLAVELMNEPFAPRATLESLMKYYHDGYNAVRKYSSTAYVIMSNRLGPHDP 403
Query: 389 TELLGFAAGFPGAVLDVHYYNLFTSSFNGLTVDQNIDYVRTNRSDELSTVTRPNGPLTFV 448
TE L FA GFP AV+DVHYY +F FN LTV QNID++++N S EL VT NGPLTFV
Sbjct: 404 TEFLQFANGFPRAVIDVHYYTVFNDLFNNLTVQQNIDFIKSNFSSELKNVTTQNGPLTFV 463
Query: 449 GEWVAEWNVQGASNQDYQRFAQAQLDVYGRATFGWAYWTYKNVNNHWSMQWNIQNGIISL 508
GEWVAEW V A+ ++YQR+A+ Q+DVYG+ATFGW+YWT KNVNNHW+++W I NG ISL
Sbjct: 464 GEWVAEWRVPNATKEEYQRYAKVQMDVYGQATFGWSYWTLKNVNNHWNLEWMINNGYISL 523
Query: 509 KS 510
K+
Sbjct: 524 KT 525
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,013,450
Number of extensions: 763120
Number of successful extensions: 1586
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1567
Number of HSP's successfully gapped: 5
Length of query: 510
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 405
Effective length of database: 11,553,331
Effective search space: 4679099055
Effective search space used: 4679099055
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)