Os10g0370800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment).
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Os10g0370800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Exo-1,3-beta-glucanase precursor (EC 3.2.1.58) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.33 | 0.32 | 9.09 | -0.714 | 0.434 | -0.803 | 0.305 | 0.674 | 0.332 | 2.2 | 18.62 | 365 | -- | -- |
| 46.67 | 0.318 | 9.11 | -0.82 | 0.46 | -0.781 | 0.218 | -- | 0.309 | 2.12 | 18 | 404 | -- | -- |
| 46.63 | 0.318 | 9.1 | -0.745 | 0.45 | -0.799 | -- | 0.545 | 0.329 | 2.11 | 18.86 | 397 | -- | -- |
| 46.83 | 0.319 | 9.11 | -0.84 | 0.456 | -0.804 | -- | -- | 0.299 | 2.08 | 18 | 404 | -- | -- |
| 51.87 | 0.335 | 9.09 | -0.696 | -- | -1.08 | -- | 0.739 | 0.353 | -- | 22.67 | 141 | -- | -- |
| 56.11 | 0.351 | 9.13 | -1.03 | 0.649 | -- | 0.315 | -- | 0.162 | 3.45 | -- | -- | -- | -- |
| 56.42 | 0.352 | 9.13 | -1.04 | 0.651 | -- | -- | -- | 0.16 | 3.47 | -- | -- | -- | -- |
| 52.16 | 0.336 | 9.1 | -0.818 | -- | -1.03 | -- | -- | 0.317 | -- | 22.87 | 141 | -- | -- |
| 63.39 | 0.371 | 9.08 | -- | 0.357 | -1.34 | -- | -- | 0.448 | 1.26 | 14.9 | 358 | -- | -- |
| 80.17 | 0.418 | 9.13 | -1.01 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 84.92 | 0.431 | 9.11 | -- | 0.631 | -- | -- | -- | 0.275 | 3.48 | -- | -- | -- | -- |
| 66.73 | 0.38 | 9.07 | -- | -- | -1.57 | -- | -- | 0.465 | -- | 14.98 | 169 | -- | -- |
| 107.21 | 0.483 | 9.11 | -- | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.96 | temperature | 30 | 270 | < th | dose independent | rect. | 12 | 23 |
| 2 | 46.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 3 | 46.07 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 4 | 46.09 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 14 |
| 5 | 46.10 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 22 |
| 6 | 46.11 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 10 |
| 7 | 46.11 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 12 |
| 9 | 46.13 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 10 | 46.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 12 | 46.16 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 21 |
| 13 | 46.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 17 | 46.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 19 | 46.22 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 19 |
| 20 | 46.23 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 21 | 46.24 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 10 |
| 23 | 46.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 25 | 46.28 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 19 |
| 27 | 46.29 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 8 |
| 38 | 46.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 53 | 46.41 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 21 |
| 81 | 46.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 86 | 46.53 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 118 | 46.64 | temperature | 30 | 720 | < th | dose independent | sin | 2 | NA |
| 123 | 46.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 127 | 46.66 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 1 |
| 133 | 46.67 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 14 |
| 134 | 46.67 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 23 |
| 148 | 46.72 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 183 | 46.79 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 185 | 46.80 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 188 | 46.81 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 196 | 46.85 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 8 |
| 222 | 46.88 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 230 | 46.90 | temperature | 30 | 720 | > th | dose independent | rect. | 14 | 3 |
| 231 | 46.90 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 6 |
| 237 | 46.91 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 10 |
| 254 | 46.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 267 | 46.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 329 | 47.02 | temperature | 30 | 720 | > th | dose independent | rect. | 14 | 23 |
| 363 | 47.06 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 19 |
| 408 | 47.12 | temperature | 30 | 720 | > th | dose independent | sin | 1 | NA |
| 414 | 47.13 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 14 |
| 423 | 47.14 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 13 |
| 430 | 47.15 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 17 |
| 433 | 47.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 443 | 47.17 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 4 |
| 444 | 47.17 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 12 |
| 447 | 47.17 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 480 | 47.22 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 490 | 47.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 499 | 47.26 | humidity | 60 | 720 | < th | dose independent | rect. | 13 | 2 |
| 504 | 47.26 | temperature | 30 | 720 | < th | dose independent | rect. | 20 | 23 |
| 520 | 47.28 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 548 | 47.32 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 12 |
| 578 | 47.35 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 8 |
| 596 | 47.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 612 | 47.38 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 622 | 47.39 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 751 | 47.42 | temperature | 30 | 720 | > th | dose dependent | sin | 3 | NA |
| 794 | 47.43 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 21 |
| 797 | 47.43 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 23 |
| 875 | 47.49 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 886 | 47.50 | humidity | 60 | 720 | > th | dose independent | rect. | 24 | 19 |
| 921 | 47.54 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 10 |