BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0571200 Os09g0571200|AK062604
         (290 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0571200  C2 domain containing protein                        322   2e-88
Os08g0562600  C2 calcium/lipid-binding region, CaLB domain c...   244   4e-65
Os01g0853800  C2 calcium/lipid-binding region, CaLB domain c...   115   3e-26

>Os09g0571200 C2 domain containing protein
          Length = 290

 Score =  322 bits (824), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 178/262 (67%), Positives = 178/262 (67%)

Query: 1   MAASRYEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKL 60
           MAASRYEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKL
Sbjct: 1   MAASRYEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKL 60

Query: 61  TVPLPPSTRLDDAVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIGARASRSLRLKR 120
           TVPLPPSTRLDDAVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIGARASRSLRLKR
Sbjct: 61  TVPLPPSTRLDDAVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIGARASRSLRLKR 120

Query: 121 PSGRPHGRLEVRVAVREPKRXXXXXXXXXXXXHQQSSRDXXXXXXXXXXXXXXXXXXXXX 180
           PSGRPHGRLEVRVAVREPKR            HQQSSRD                     
Sbjct: 121 PSGRPHGRLEVRVAVREPKRYYDPSPAYPAPYHQQSSRDPYAYGNTTTGGYGYAYGGAPP 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXQPAYGSAAPPQPAAVSYGAPPVDAXXXXXXXXXXXXXXX 240
                                QPAYGSAAPPQPAAVSYGAPPVDA               
Sbjct: 181 APYSAAPPAGYPSAYGGAAPTQPAYGSAAPPQPAAVSYGAPPVDAKKKSKMGMGGGLAVG 240

Query: 241 XXXXXXXXXXXXXXXSYLENKF 262
                          SYLENKF
Sbjct: 241 AAAGVLGGLALAGGASYLENKF 262



>Os08g0562600 C2 calcium/lipid-binding region, CaLB domain containing protein
          Length = 291

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 118/138 (85%), Positives = 129/138 (93%)

Query: 3   ASRYEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKLTV 62
            SRYEVEVTV+SARDLKNVNWRNGDLKPYAV+W+DDGAKCSTRVDLDNADNP WDDKLT+
Sbjct: 2   GSRYEVEVTVSSARDLKNVNWRNGDLKPYAVLWVDDGAKCSTRVDLDNADNPNWDDKLTL 61

Query: 63  PLPPSTRLDDAVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIGARASRSLRLKRPS 122
           PLPPS+RLDDA+LYLDVVHANA +GVKPLVGSARLPLRDVL D G+GAR SRSLRLKRPS
Sbjct: 62  PLPPSSRLDDALLYLDVVHANAAEGVKPLVGSARLPLRDVLDDAGVGARVSRSLRLKRPS 121

Query: 123 GRPHGRLEVRVAVREPKR 140
           GRP GRL++R+AVRE  R
Sbjct: 122 GRPQGRLDLRLAVRESAR 139



>Os01g0853800 C2 calcium/lipid-binding region, CaLB domain containing protein
          Length = 327

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 8/139 (5%)

Query: 7   EVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKLTVPLPP 66
           ++EVTV S + LKNVNWR GDL+ Y V ++D   + +TR D      P W++++ +PLPP
Sbjct: 49  DLEVTVVSGKHLKNVNWRRGDLRAYVVAYLDPSRRAATRPDDVGGCKPAWNERVVLPLPP 108

Query: 67  STRLDD--AVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIG------ARASRSLRL 118
                D   +L LDV H+  +D  KPLVGSAR PLRD+L  T         A A  +L L
Sbjct: 109 HLSPHDPSLLLSLDVFHSKPSDSPKPLVGSARSPLRDLLFSTNPNPSPDSPASALITLPL 168

Query: 119 KRPSGRPHGRLEVRVAVRE 137
            RPSGRP G+L +R+A+RE
Sbjct: 169 LRPSGRPQGKLRIRLALRE 187



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.132    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,924,109
Number of extensions: 265964
Number of successful extensions: 685
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 685
Number of HSP's successfully gapped: 3
Length of query: 290
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 190
Effective length of database: 11,814,401
Effective search space: 2244736190
Effective search space used: 2244736190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 155 (64.3 bits)