Os08g0562600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os08g0562600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.14 | 0.379 | 12.1 | 0.705 | 2.38 | -1.38 | 1.12 | 1.25 | 0.132 | 15 | 24.78 | 1130 | -- | -- |
| 65.82 | 0.378 | 12.1 | 0.403 | 2.35 | -1.23 | 1.04 | -- | 0.0593 | 15 | 24.67 | 1127 | -- | -- |
| 69.13 | 0.387 | 12.1 | 0.603 | 2.38 | -1.36 | -- | 0.646 | 0.0951 | 15 | 24.98 | 1126 | -- | -- |
| 69.22 | 0.387 | 12.2 | 0.437 | 2.39 | -1.29 | -- | -- | 0.044 | 15 | 25 | 1110 | -- | -- |
| 377.04 | 0.904 | 12.2 | 0.714 | -- | -2.04 | -- | 0.758 | 0.124 | -- | 24.36 | 1132 | -- | -- |
| 115.01 | 0.503 | 12.2 | 0.0317 | 2.6 | -- | 1.3 | -- | -0.0893 | 14.7 | -- | -- | -- | -- |
| 120.86 | 0.515 | 12.2 | 0.0635 | 2.6 | -- | -- | -- | -0.0815 | 14.7 | -- | -- | -- | -- |
| 376.69 | 0.904 | 12.1 | 0.575 | -- | -2.04 | -- | -- | 0.149 | -- | 24.1 | 1134 | -- | -- |
| 73.75 | 0.4 | 12.2 | -- | 2.42 | -1.19 | -- | -- | -0.0255 | 15 | 25.34 | 1095 | -- | -- |
| 515.41 | 1.06 | 12.2 | -0.0475 | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
| 120.97 | 0.514 | 12.2 | -- | 2.6 | -- | -- | -- | -0.0886 | 14.7 | -- | -- | -- | -- |
| 384.92 | 0.914 | 12.1 | -- | -- | -1.94 | -- | -- | 0.0812 | -- | 24.1 | 1129 | -- | -- |
| 515.47 | 1.06 | 12.2 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 2 | 68.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 3 | 68.37 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 13 | 68.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 23 | 69.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 48 | 69.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 49 | 69.33 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 66 | 69.41 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 82 | 69.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 10 |
| 96 | 69.62 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 242 | 70.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 278 | 70.19 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 310 | 70.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 328 | 70.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 375 | 70.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 560 | 71.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 609 | 71.48 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |