Os09g0571200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0571200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : C2 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.71 | 0.565 | 10.9 | 1.11 | 1.8 | -1.69 | -1.11 | 3.5 | 0.297 | 3.48 | 25.6 | 904 | -- | -- |
| 161.02 | 0.591 | 11 | 0.157 | 1.84 | -1.44 | -0.441 | -- | -0.0587 | 3.93 | 25.8 | 1021 | -- | -- |
| 147.44 | 0.566 | 10.9 | 1.15 | 1.76 | -1.72 | -- | 3.61 | 0.276 | 3.45 | 25.7 | 905 | -- | -- |
| 160.36 | 0.59 | 11 | 0.163 | 1.74 | -1.46 | -- | -- | -0.0593 | 3.57 | 25.77 | 898 | -- | -- |
| 251.87 | 0.743 | 11 | 0.0606 | -- | -1.11 | -- | 0.0902 | -0.148 | -- | 25.7 | 905 | -- | -- |
| 217.68 | 0.692 | 11.1 | -0.264 | 1.74 | -- | -1.02 | -- | -0.518 | 4.82 | -- | -- | -- | -- |
| 220.39 | 0.695 | 11.1 | -0.26 | 1.73 | -- | -- | -- | -0.513 | 4.8 | -- | -- | -- | -- |
| 251.9 | 0.742 | 11 | 0.0402 | -- | -1.11 | -- | -- | -0.154 | -- | 25.77 | 898 | -- | -- |
| 161.11 | 0.591 | 11 | -- | 1.75 | -1.43 | -- | -- | -0.076 | 3.62 | 25.77 | 902 | -- | -- |
| 379.29 | 0.91 | 11.1 | -0.195 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 222.18 | 0.697 | 11.1 | -- | 1.73 | -- | -- | -- | -0.484 | 4.81 | -- | -- | -- | -- |
| 251.95 | 0.742 | 11 | -- | -- | -1.1 | -- | -- | -0.159 | -- | 25.77 | 898 | -- | -- |
| 380.3 | 0.91 | 11.1 | -- | -- | -- | -- | -- | -0.447 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.76 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 18 |
| 31 | 151.55 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 23 |
| 33 | 151.72 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 22 |
| 38 | 151.88 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 20 |
| 47 | 152.40 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 49 | 152.45 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 23 |
| 51 | 152.56 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 58 | 153.01 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 16 |
| 59 | 153.02 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 73 | 153.37 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 80 | 153.55 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 83 | 153.59 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 22 |
| 91 | 153.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 133 | 154.49 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 150 | 154.72 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 23 |
| 181 | 155.15 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 187 | 155.18 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 191 | 155.22 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 23 |
| 205 | 155.38 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 260 | 155.76 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 272 | 155.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 342 | 156.52 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 360 | 156.64 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 373 | 156.78 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 375 | 156.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 376 | 156.80 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 401 | 156.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 458 | 157.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 518 | 157.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 536 | 157.72 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 547 | 157.78 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 568 | 157.90 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 23 |
| 589 | 158.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 607 | 158.11 | temperature | 20 | 720 | > th | dose dependent | sin | 20 | NA |
| 632 | 158.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 642 | 158.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 663 | 158.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 688 | 158.43 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 739 | 158.62 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 750 | 158.66 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 752 | 158.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 798 | 158.76 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 905 | 158.91 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 915 | 158.92 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 918 | 158.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 965 | 158.99 | temperature | 25 | 4320 | < th | dose independent | sin | 1 | NA |