BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0567900 Os09g0567900|AK061415
(337 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0567900 Inosine/uridine-preferring nucleoside hydrolas... 699 0.0
Os08g0557900 Inosine/uridine-preferring nucleoside hydrolas... 520 e-148
Os03g0425200 Inosine/uridine-preferring nucleoside hydrolas... 317 7e-87
>Os09g0567900 Inosine/uridine-preferring nucleoside hydrolase domain containing
protein
Length = 337
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MDLQEAAMEARNGHRIPPTEEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTT 60
MDLQEAAMEARNGHRIPPTEEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTT
Sbjct: 1 MDLQEAAMEARNGHRIPPTEEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTT 60
Query: 61 SHATRNALILCDRAGRPEVPVAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKV 120
SHATRNALILCDRAGRPEVPVAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKV
Sbjct: 61 SHATRNALILCDRAGRPEVPVAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKV 120
Query: 121 EQSAAEFLVDKVSESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNA 180
EQSAAEFLVDKVSESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNA
Sbjct: 121 EQSAAEFLVDKVSESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNA 180
Query: 181 TPSAEANIHSDPEAADIVFTSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDI 240
TPSAEANIHSDPEAADIVFTSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDI
Sbjct: 181 TPSAEANIHSDPEAADIVFTSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDI 240
Query: 241 CKFYRDWHVHSYGVDALFLHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLK 300
CKFYRDWHVHSYGVDALFLHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLK
Sbjct: 241 CKFYRDWHVHSYGVDALFLHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLK 300
Query: 301 KWNSDNPWTGYSPISVAWTVDVPKVLAYAKELLFNAQ 337
KWNSDNPWTGYSPISVAWTVDVPKVLAYAKELLFNAQ
Sbjct: 301 KWNSDNPWTGYSPISVAWTVDVPKVLAYAKELLFNAQ 337
>Os08g0557900 Inosine/uridine-preferring nucleoside hydrolase domain containing
protein
Length = 324
Score = 520 bits (1338), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/315 (77%), Positives = 282/315 (89%), Gaps = 1/315 (0%)
Query: 20 EEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTTSHATRNALILCDRAGRPEV 79
+K+IIDTDPGIDDS+ I+MAF AP V+++GLTTIFGN TT +AT+NAL+LC+RAG PEV
Sbjct: 9 RDKLIIDTDPGIDDSMTILMAFRAPTVEIIGLTTIFGNTTTKNATQNALLLCERAGHPEV 68
Query: 80 PVAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKVEQSAAEFLVDKVSESPGEI 139
PVAEGSAEPLKGG+P VADFVHGSDGLGN P PT+ KV+++AAEF+V+KVS+ PGE+
Sbjct: 69 PVAEGSAEPLKGGEPRVADFVHGSDGLGNLFLPAPTS-KKVDENAAEFMVNKVSQFPGEV 127
Query: 140 SVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANIHSDPEAADIVF 199
S+LALGPLTN+ALA+K+D SFASKVK+IVVLGGAFFAAGN +P+AEANI+ DPEAADIVF
Sbjct: 128 SILALGPLTNVALAIKRDPSFASKVKKIVVLGGAFFAAGNVSPAAEANIYGDPEAADIVF 187
Query: 200 TSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDICKFYRDWHVHSYGVDALFL 259
TSGAD+ VVG+NITTQV FTD+D+LELRNSKGKHAQFLCD+C+FYRDWH S G +FL
Sbjct: 188 TSGADVDVVGINITTQVCFTDEDLLELRNSKGKHAQFLCDMCQFYRDWHAESDGFHGIFL 247
Query: 260 HDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLKKWNSDNPWTGYSPISVAWT 319
HDPVSFTALVHPEYFTFKKGVVRVETQGIC GHT MD GLKKWNS+NPW+GY PISVAWT
Sbjct: 248 HDPVSFTALVHPEYFTFKKGVVRVETQGICTGHTLMDQGLKKWNSENPWSGYKPISVAWT 307
Query: 320 VDVPKVLAYAKELLF 334
VDVP VLA+ KELL
Sbjct: 308 VDVPNVLAFVKELLM 322
>Os03g0425200 Inosine/uridine-preferring nucleoside hydrolase domain containing
protein
Length = 322
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/316 (50%), Positives = 216/316 (68%), Gaps = 2/316 (0%)
Query: 19 TEEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTTSHATRNALILCDRAGRPE 78
T++K++IDTDPGIDD++AI +A +P V+++GLTTIFGN T+ ATRNAL L + GR +
Sbjct: 4 TKKKLVIDTDPGIDDAMAIFVALRSPEVELLGLTTIFGNVYTTLATRNALHLLEAVGRTD 63
Query: 79 VPVAEGSAEPLKGG-KPHVADFVHGSDGLGNTSFPDPTTTNKVEQSAAEFLVDKVSESPG 137
+PVAEGS +K K +A FVHGSDGLGN +FP P T ++QSAA FLV++ + PG
Sbjct: 64 IPVAEGSHVTIKKATKLRIASFVHGSDGLGNQNFP-PPTGKPLDQSAAAFLVEQANLYPG 122
Query: 138 EISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANIHSDPEAADI 197
+++V+ALGPLTN+ALA++ D SF K+ +IV+LGGA+ GN P+AEANI DP+AADI
Sbjct: 123 QVTVVALGPLTNLALAIELDPSFPKKIGQIVILGGAYSVNGNVNPAAEANIFGDPDAADI 182
Query: 198 VFTSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDICKFYRDWHVHSYGVDAL 257
VFTSGADI VG+NIT QV +D D +L S K+A++L I Y D+H +Y + +
Sbjct: 183 VFTSGADILAVGINITHQVVLSDADREKLEQSDSKYARYLSKILGLYYDYHKDAYFIKGV 242
Query: 258 FLHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLKKWNSDNPWTGYSPISVA 317
+LHDP + A V P T+ +GVVRV+T GI KG T D K++ WTG + VA
Sbjct: 243 YLHDPATLIAAVDPSLMTYTEGVVRVQTDGITKGLTVFDTTKKRYGEITAWTGKPTVKVA 302
Query: 318 WTVDVPKVLAYAKELL 333
TVD P V+ + L
Sbjct: 303 VTVDAPAVVEMIMQRL 318
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,015,743
Number of extensions: 505538
Number of successful extensions: 1103
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1102
Number of HSP's successfully gapped: 3
Length of query: 337
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,762,187
Effective search space: 2775876132
Effective search space used: 2775876132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)