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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0567900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Inosine/uridine-preferring nucleoside hydrolase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.34 (0.0403) R2 : 0.209
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.05 (0.106) R2dC : 0.171 R2C : 0.164
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.38 (0.0847) R2dN8 : 0.045 R2N8 : 0.0377
σ : 0.759
deviance : 263.48
__
_____
C
peak time of C : 6.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
245.22 0.736 4.32 -0.525 1.06 -0.195 -1.15 2.7 0.266 6.24 88.75 1617 -- --
258.21 0.754 4.33 -0.24 0.954 0.28 -1.02 -- 0.408 6.69 88.75 1617 -- --
247.85 0.733 4.33 -0.49 1.07 -0.335 -- 2.81 0.258 6.18 86 1531 -- --
260.13 0.751 4.35 -0.177 1.12 -0.36 -- -- 0.298 6.45 79.99 2175 -- --
303.52 0.816 4.33 -0.31 -- 0.485 -- 0.792 0.467 -- 86 1531 -- --
260.36 0.756 4.34 -0.208 1.05 -- -0.869 -- 0.353 6.31 -- -- -- --
262.2 0.758 4.34 -0.22 1.05 -- -- -- 0.355 6.24 -- -- -- --
300.69 0.811 4.34 -0.285 -- 0.901 -- -- 0.479 -- 92.99 1839 -- --
260.81 0.752 4.35 -- 1.13 -0.441 -- -- 0.298 6.42 79.12 2170 -- --
319.24 0.835 4.36 -0.191 -- -- -- -- 0.378 -- -- -- -- --
263.48 0.759 4.34 -- 1.05 -- -- -- 0.38 6.26 -- -- -- --
302.81 0.813 4.33 -- -- 0.867 -- -- 0.507 -- 92.99 1839 -- --
320.2 0.835 4.36 -- -- -- -- -- 0.399 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 235.48 wind 1 10 < th dose independent rect. 13 1
3 235.48 wind 1 10 < th dose dependent rect. 13 1
5 235.94 atmosphere 1000 30 < th dose dependent rect. 13 1
16 236.22 atmosphere 1000 90 < th dose independent rect. 13 1
31 239.50 radiation 40 10 > th dose dependent rect. 14 1
71 240.92 atmosphere 1005 10 > th dose independent rect. 5 4
72 241.28 temperature 20 270 > th dose independent rect. 3 4
73 241.32 atmosphere 1005 270 > th dose independent rect. 4 2
74 241.44 atmosphere 1005 270 > th dose independent rect. 3 4
76 241.59 wind 1 10 < th dose dependent rect. 13 5
84 242.13 humidity 90 1440 > th dose dependent rect. 2 18
92 242.65 atmosphere 1015 14400 < th dose independent rect. 17 3
99 242.82 atmosphere 1015 14400 > th dose dependent rect. 12 8
102 242.83 atmosphere 1015 14400 > th dose dependent rect. 13 3
106 242.90 atmosphere 1015 14400 > th dose independent rect. 14 2
113 242.98 atmosphere 1015 14400 < th dose independent rect. 14 5
119 243.06 atmosphere 1015 14400 > th dose independent rect. 13 7
127 243.15 temperature 20 270 > th dose independent rect. 16 15
186 243.52 humidity 90 1440 > th dose dependent rect. 2 1
193 243.68 humidity 90 1440 > th dose dependent sin 0 NA
202 243.86 radiation 1 4320 < th dose independent rect. 6 3
203 243.89 radiation 1 4320 > th dose independent rect. 6 3
205 243.90 radiation 1 4320 > th dose independent rect. 6 5
209 243.93 humidity 90 14400 > th dose independent rect. 7 1
210 243.94 radiation 1 4320 < th dose independent rect. 6 5
221 244.06 temperature 15 270 > th dose dependent rect. 3 3
227 244.16 radiation 1 4320 < th dose dependent rect. 6 3
235 244.27 humidity 90 14400 < th dose independent rect. 7 1
241 244.34 radiation 1 4320 < th dose dependent rect. 6 7
249 244.36 humidity 90 14400 > th dose dependent rect. 7 1
260 244.41 radiation 1 4320 < th dose dependent rect. 6 5
277 244.52 wind 1 90 > th dose independent rect. 8 21
280 244.55 temperature 20 720 > th dose independent rect. 19 4
286 244.60 radiation 40 10 > th dose independent rect. 14 1
336 244.70 humidity 90 1440 < th dose independent rect. 4 17
337 244.71 wind 1 90 > th dose independent rect. 7 23
339 244.76 humidity 90 1440 > th dose dependent rect. 2 7
346 244.84 humidity 90 1440 > th dose independent rect. 3 18
380 245.03 atmosphere 1005 30 > th dose independent rect. 5 18
392 245.09 temperature 20 720 < th dose dependent rect. 21 4
412 245.22 humidity 80 14400 > th dose dependent rect. 12 2
418 245.25 atmosphere 1000 10 > th dose dependent rect. 5 4
471 245.50 temperature 20 720 < th dose dependent rect. 22 1
477 245.51 atmosphere 1015 14400 > th dose dependent sin 19 NA
512 245.58 wind 9 14400 < th dose independent rect. 6 4
513 245.58 humidity 90 1440 < th dose independent rect. 14 5
546 245.69 atmosphere 1005 30 > th dose independent rect. 5 14
558 245.73 humidity 90 14400 < th dose independent rect. 21 1
562 245.74 humidity 90 1440 > th dose independent rect. 24 20
573 245.77 radiation 30 90 < th dose independent rect. 3 10
585 245.81 temperature 20 270 > th dose independent rect. 11 21
597 245.85 humidity 90 1440 > th dose independent sin 22 NA
625 245.91 temperature 15 10 > th dose dependent rect. 5 4
641 245.97 humidity 90 1440 < th dose independent sin 22 NA
647 245.97 atmosphere 1000 10 > th dose dependent rect. 23 6
651 245.98 humidity 80 14400 > th dose dependent rect. 7 9
661 246.02 temperature 20 30 > th dose independent rect. 16 17
666 246.03 humidity 90 14400 > th dose independent rect. 21 2
703 246.12 atmosphere 1000 270 > th dose dependent rect. 4 2
721 246.15 atmosphere 1005 10 > th dose dependent rect. 2 3
755 246.23 humidity 90 14400 > th dose independent rect. 16 7
763 246.24 humidity 90 1440 > th dose dependent rect. 15 4
776 246.27 humidity 90 14400 > th dose independent rect. 16 1
785 246.29 radiation 30 90 < th dose independent rect. 3 22
786 246.29 humidity 90 1440 > th dose dependent no NA NA
791 246.30 humidity 90 1440 > th dose dependent rect. 13 23
804 246.33 humidity 90 1440 > th dose dependent rect. 10 23
806 246.34 humidity 90 14400 < th dose independent rect. 7 6
815 246.35 humidity 90 14400 > th dose independent rect. 7 10
819 246.35 radiation 20 14400 < th dose dependent rect. 2 3
824 246.36 humidity 90 1440 > th dose independent rect. 14 5
831 246.37 humidity 90 14400 > th dose independent rect. 7 7
833 246.37 atmosphere 1015 14400 > th dose dependent rect. 19 2
834 246.37 humidity 90 1440 > th dose dependent rect. 16 23
846 246.40 humidity 90 1440 > th dose dependent rect. 13 7
867 246.43 radiation 1 10 > th dose dependent rect. 18 13
873 246.44 radiation 1 720 < th dose independent rect. 20 12
881 246.45 radiation 1 10 > th dose dependent rect. 5 2
899 246.46 humidity 90 14400 > th dose independent rect. 3 20
907 246.47 humidity 90 1440 > th dose dependent rect. 6 23
934 246.51 radiation 1 4320 > th dose independent rect. 10 2
955 246.54 humidity 90 1440 > th dose independent no NA NA
970 246.55 radiation 40 270 < th dose dependent rect. 2 9
976 246.56 humidity 90 14400 < th dose independent rect. 7 10
979 246.56 humidity 90 14400 > th dose independent rect. 7 16
982 246.56 humidity 90 1440 > th dose independent rect. 13 23