BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0567900 Os09g0567900|AK061415
         (337 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36310.1  | chr2:15224692-15226633 REVERSE LENGTH=337          461   e-130
AT1G05620.1  | chr1:1679286-1681527 FORWARD LENGTH=323            314   5e-86
AT5G18870.1  | chr5:6298386-6300289 FORWARD LENGTH=259             52   5e-07

>AT2G36310.1 | chr2:15224692-15226633 REVERSE LENGTH=337
          Length = 336

 Score =  461 bits (1187), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/314 (69%), Positives = 262/314 (83%), Gaps = 1/314 (0%)

Query: 21  EKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTTSHATRNALILCDRAGRPEVP 80
           EK+IIDTDPGIDDS+AI+MAF+ P ++++GLTT+FGN +T  ATRNAL+LC+ AG P+VP
Sbjct: 22  EKLIIDTDPGIDDSMAILMAFQTPELEILGLTTVFGNVSTQDATRNALLLCEIAGFPDVP 81

Query: 81  VAEGSAEPLKGGKPHVADFVHGSDGLGNTSFPDPTTTNKVEQSAAEFLVDKVSESPGEIS 140
           VAEGS+EPLKGG P VADFVHG +GLG+ S P P +  K E+SAAEFL +KV E PGE++
Sbjct: 82  VAEGSSEPLKGGIPRVADFVHGKNGLGDVSLP-PPSRKKSEKSAAEFLDEKVEEYPGEVT 140

Query: 141 VLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANIHSDPEAADIVFT 200
           +LALGPLTN+ALA+K+DSSFASKVK+IV+LGGAFF+ GN  P+AEANI+ DPEAAD+VFT
Sbjct: 141 ILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPEAADVVFT 200

Query: 201 SGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDICKFYRDWHVHSYGVDALFLH 260
           SGADI VVG+NITTQ+  +D D+LEL N KGKH++ + D+CKFYRDWHV S GV  ++LH
Sbjct: 201 SGADITVVGINITTQLKLSDDDLLELGNCKGKHSKLISDMCKFYRDWHVKSDGVYGVYLH 260

Query: 261 DPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLKKWNSDNPWTGYSPISVAWTV 320
           DPVSF A+V P+ FT+KKGVVRVETQGIC GHT MD GLK+WN  NPW GYSPISVAWTV
Sbjct: 261 DPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPISVAWTV 320

Query: 321 DVPKVLAYAKELLF 334
           DV  VL Y K  L 
Sbjct: 321 DVEGVLEYVKAKLM 334



>AT1G05620.1 | chr1:1679286-1681527 FORWARD LENGTH=323
          Length = 322

 Score =  314 bits (804), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 160/318 (50%), Positives = 213/318 (66%), Gaps = 2/318 (0%)

Query: 20  EEKVIIDTDPGIDDSVAIMMAFEAPGVKVVGLTTIFGNCTTSHATRNALILCDRAGRPEV 79
            +K+IIDTDPGIDD++AI +A  +P V V+GLTTIFGN  T+ ATRNAL L + AGR ++
Sbjct: 6   RKKIIIDTDPGIDDAMAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDI 65

Query: 80  PVAEGSAEP-LKGGKPHVADFVHGSDGLGNTSFPDPTTTNKVEQSAAEFLVDKVSESPGE 138
           PVAEG+ +  L   K  +ADFVHG DGLGN +FP P     +E+S  EFLV++    PGE
Sbjct: 66  PVAEGTHKTFLNDTKLRIADFVHGKDGLGNQNFP-PPKGKPIEKSGPEFLVEQAKLCPGE 124

Query: 139 ISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGAFFAAGNATPSAEANIHSDPEAADIV 198
           I+V+ALGPLTN+ALA++ D  F+  V +IV+LGGAF   GN  P++EANI  DPEAADIV
Sbjct: 125 ITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIV 184

Query: 199 FTSGADIYVVGLNITTQVYFTDKDMLELRNSKGKHAQFLCDICKFYRDWHVHSYGVDALF 258
           FT GADI  VG+N+T QV  T  D  +L +SKGK AQ+LC I   Y D+H+ +Y +  ++
Sbjct: 185 FTCGADIIAVGINVTHQVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVY 244

Query: 259 LHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLKKWNSDNPWTGYSPISVAW 318
           LHDP +  A   P  FT+ +GV RV+T GI +G T +   LK++   N W+    + VA 
Sbjct: 245 LHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAV 304

Query: 319 TVDVPKVLAYAKELLFNA 336
           TVD P V+    + L  +
Sbjct: 305 TVDAPAVVKLIMDRLMES 322



>AT5G18870.1 | chr5:6298386-6300289 FORWARD LENGTH=259
          Length = 258

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 14/91 (15%)

Query: 121 EQSAAEFLVDKVSESPGEISVLALGPLTNIALAMKKDSSFASKVKRIVVLGGA------- 173
           + +A + +VDKVSE P  IS+  +G  TN+AL M  +      ++ I V+GG+       
Sbjct: 164 QPTAQKVIVDKVSEGP--ISIFVIGSHTNLALFMMSNPHLKHNIQHIYVMGGSVRCQNPN 221

Query: 174 -----FFAAGNATPSAEANIHSDPEAADIVF 199
                 F    + P AE NI +DP AA  VF
Sbjct: 222 GFCGNLFTDYTSNPYAEFNIFTDPFAAYQVF 252



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,582,292
Number of extensions: 317417
Number of successful extensions: 781
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 779
Number of HSP's successfully gapped: 3
Length of query: 337
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 238
Effective length of database: 8,392,385
Effective search space: 1997387630
Effective search space used: 1997387630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)