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Os03g0425200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Inosine/uridine-preferring nucleoside hydrolase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0175) R2 : 0.0512
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.183 (0.0368) R2dN8 : 0.0661 R2N8 : 0.0512
σ : 0.33
deviance : 49.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.35 0.237 13 -0.151 0.353 0.319 -0.429 -0.367 -0.209 20.6 18.22 9 -- --
25.82 0.237 13 -0.146 0.348 0.307 -0.696 -- -0.204 20.8 18.11 9 -- --
25.65 0.236 13 -0.149 0.347 0.316 -- -0.482 -0.209 20.6 16.1 8 -- --
27.33 0.243 13 -0.115 0.349 0.303 -- -- -0.205 20.6 16.1 8 -- --
30.98 0.259 13 -0.115 -- 0.437 -- -0.562 -0.212 -- 16.94 9 -- --
29.43 0.254 13 -0.158 0.552 -- -0.583 -- -0.199 22.1 -- -- -- --
30.78 0.26 13 -0.136 0.554 -- -- -- -0.198 22.2 -- -- -- --
32.53 0.266 13 -0.114 -- 0.432 -- -- -0.203 -- 16.11 9 -- --
27.68 0.245 13 -- 0.348 0.309 -- -- -0.194 20.6 16.11 8 -- --
49.41 0.328 13 -0.128 -- -- -- -- -0.197 -- -- -- -- --
31.26 0.262 13 -- 0.554 -- -- -- -0.183 22.2 -- -- -- --
32.85 0.267 13 -- -- 0.441 -- -- -0.199 -- 16.11 9 -- --
49.84 0.33 13 -- -- -- -- -- -0.183 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.96 radiation 30.0 90 < th dose dependent rect. 5 5
3 21.03 radiation 20.0 90 < th dose independent rect. 5 5
6 21.46 wind 1.0 270 > th dose independent rect. 4 3
12 21.78 radiation 10.0 270 < th dose dependent rect. 5 2
14 21.81 radiation 10.0 270 < th dose independent rect. 5 2
19 22.05 humidity 70.0 90 > th dose independent rect. 5 4
25 22.16 wind 9.0 90 < th dose independent rect. 9 20
26 22.20 humidity 60.0 90 > th dose dependent rect. 5 5
29 22.23 wind 9.0 270 < th dose independent rect. 6 23
38 22.36 atmosphere 1000.0 90 > th dose independent rect. 5 4
39 22.36 radiation 30.0 10 < th dose dependent rect. 6 4
41 22.38 temperature 30.0 90 < th dose independent rect. 5 4
46 22.41 atmosphere 1010.0 270 < th dose independent rect. 5 1
47 22.41 atmosphere 1010.0 90 < th dose independent rect. 5 4
49 22.43 wind 9.0 90 < th dose independent rect. 5 4
50 22.43 temperature 10.0 90 > th dose independent rect. 5 4
55 22.43 temperature 10.0 90 > th dose independent rect. 9 20
56 22.44 precipitation 0.1 90 < th dose independent rect. 5 4
57 22.44 precipitation 0.1 90 < th dose dependent rect. 5 4
59 22.46 atmosphere 1000.0 270 > th dose independent rect. 5 1
67 22.53 precipitation 0.1 270 < th dose independent rect. 6 23
68 22.53 precipitation 0.1 270 < th dose dependent rect. 6 23
69 22.54 wind 7.0 270 < th dose independent rect. 5 1
71 22.54 temperature 10.0 270 > th dose independent rect. 5 1
73 22.54 temperature 30.0 270 < th dose independent rect. 5 1
74 22.54 humidity 50.0 270 > th dose independent rect. 5 1
83 22.54 temperature 10.0 270 > th dose independent rect. 6 23
85 22.55 radiation 30.0 270 < th dose dependent rect. 3 6
86 22.57 precipitation 0.1 270 < th dose independent rect. 5 1
87 22.57 precipitation 0.1 90 < th dose independent rect. 9 20
88 22.57 precipitation 0.1 270 < th dose dependent rect. 5 1
90 22.57 precipitation 0.1 90 < th dose dependent rect. 9 20
99 22.65 temperature 10.0 270 > th dose dependent rect. 5 1
100 22.66 wind 9.0 270 < th dose independent rect. 7 21
111 22.72 radiation 20.0 90 < th dose independent rect. 5 17
115 22.77 atmosphere 995.0 90 > th dose independent rect. 9 20
134 22.88 radiation 20.0 90 < th dose independent rect. 5 15
135 22.88 precipitation 0.1 270 < th dose independent rect. 7 21
137 22.88 precipitation 0.1 270 < th dose dependent rect. 7 21
141 22.90 radiation 10.0 270 < th dose dependent rect. 4 14
142 22.90 radiation 40.0 90 < th dose dependent rect. 5 15
143 22.91 atmosphere 995.0 270 > th dose dependent rect. 5 1
145 22.92 atmosphere 995.0 90 > th dose dependent rect. 5 4
146 22.92 radiation 40.0 90 < th dose dependent rect. 5 17
154 22.96 atmosphere 995.0 90 > th dose dependent rect. 9 20
165 22.98 temperature 10.0 270 > th dose independent rect. 7 21
169 23.01 humidity 50.0 270 > th dose dependent rect. 5 1
176 23.02 wind 9.0 90 < th dose dependent rect. 5 4
186 23.07 temperature 10.0 1440 > th dose independent rect. 6 4
189 23.07 atmosphere 995.0 1440 > th dose independent rect. 6 4
190 23.07 atmosphere 1015.0 1440 < th dose independent rect. 6 4
192 23.07 temperature 10.0 1440 > th dose independent rect. 10 20
197 23.09 radiation 20.0 90 < th dose independent rect. 15 19
200 23.10 temperature 10.0 90 > th dose dependent rect. 5 4
210 23.13 radiation 10.0 270 < th dose dependent rect. 4 9
222 23.17 humidity 50.0 4320 > th dose independent rect. 6 4
234 23.18 wind 9.0 270 < th dose dependent rect. 5 1
255 23.25 humidity 70.0 270 > th dose independent rect. 3 5
257 23.25 radiation 20.0 90 < th dose independent rect. 17 17
270 23.27 radiation 20.0 10 < th dose independent rect. 6 16
271 23.27 radiation 20.0 270 < th dose independent rect. 15 17
275 23.27 radiation 40.0 270 < th dose dependent rect. 14 18
313 23.37 radiation 10.0 270 < th dose independent rect. 3 15
318 23.39 humidity 60.0 10 > th dose dependent rect. 6 4
328 23.41 atmosphere 995.0 270 > th dose independent rect. 7 21
337 23.42 radiation 30.0 10 < th dose dependent rect. 6 16
388 23.51 humidity 50.0 90 > th dose dependent rect. 20 9
413 23.56 humidity 50.0 90 > th dose independent rect. 9 20
416 23.57 temperature 30.0 90 < th dose dependent rect. 5 4
420 23.58 radiation 1.0 270 > th dose independent rect. 7 8
422 23.58 wind 1.0 270 > th dose dependent rect. 4 3
442 23.62 radiation 30.0 90 < th dose dependent rect. 5 10
454 23.64 wind 1.0 270 > th dose independent rect. 4 15
463 23.65 temperature 10.0 1440 > th dose independent rect. 21 9
466 23.65 temperature 30.0 1440 < th dose independent rect. 21 9
470 23.65 humidity 50.0 1440 > th dose independent rect. 21 9
476 23.65 atmosphere 995.0 1440 > th dose independent rect. 21 9
477 23.65 radiation 20.0 1440 < th dose independent rect. 21 9
486 23.65 temperature 10.0 1440 > th dose independent rect. 6 15
507 23.68 radiation 20.0 10 < th dose independent rect. 17 17
538 23.73 wind 9.0 270 < th dose independent rect. 7 9
543 23.73 wind 9.0 90 < th dose dependent rect. 9 20
551 23.74 humidity 50.0 90 > th dose dependent rect. 5 15
560 23.76 radiation 1.0 90 < th dose independent rect. 20 9
567 23.76 radiation 1.0 90 < th dose dependent rect. 20 9
576 23.77 wind 1.0 270 > th dose independent rect. 15 16
581 23.78 wind 9.0 90 < th dose independent rect. 20 9
582 23.78 temperature 10.0 90 > th dose independent rect. 20 9
583 23.78 temperature 30.0 90 < th dose independent rect. 20 9
584 23.78 humidity 50.0 90 > th dose independent rect. 20 9
587 23.78 atmosphere 995.0 90 > th dose independent rect. 20 9
592 23.78 temperature 10.0 90 > th dose independent rect. 5 15
593 23.78 atmosphere 1015.0 90 < th dose independent rect. 5 15
629 23.81 atmosphere 1005.0 90 > th dose independent rect. 9 20
634 23.81 humidity 50.0 270 > th dose dependent rect. 3 5
641 23.82 precipitation 0.1 90 < th dose independent rect. 20 9
645 23.82 precipitation 0.1 90 < th dose dependent rect. 20 9
652 23.83 radiation 1.0 90 < th dose dependent sin 10 NA
660 23.84 radiation 1.0 90 > th dose independent rect. 4 5
683 23.86 temperature 15.0 270 > th dose independent rect. 7 8
697 23.87 precipitation 0.1 90 < th dose independent rect. 5 15
704 23.87 precipitation 0.1 90 < th dose dependent rect. 5 15
711 23.88 humidity 50.0 270 > th dose independent rect. 7 21
720 23.89 precipitation 0.1 270 < th dose independent rect. 7 8
727 23.89 precipitation 0.1 270 < th dose dependent rect. 7 8
773 23.93 wind 1.0 270 > th dose independent rect. 8 19
774 23.93 wind 1.0 270 > th dose independent rect. 7 21
798 23.95 atmosphere 1015.0 270 < th dose independent rect. 7 8
803 23.95 temperature 10.0 270 > th dose independent rect. 15 16
835 23.97 atmosphere 995.0 270 > th dose independent rect. 7 8
871 24.00 temperature 30.0 270 < th dose dependent rect. 5 1
892 24.02 humidity 60.0 90 > th dose dependent rect. 5 8
893 24.02 humidity 60.0 90 > th dose dependent rect. 5 10
913 24.04 temperature 10.0 1440 > th dose independent rect. 23 7
916 24.04 temperature 30.0 1440 < th dose independent rect. 23 7
920 24.04 humidity 50.0 1440 > th dose independent rect. 23 7
929 24.04 atmosphere 995.0 1440 > th dose independent rect. 23 7
930 24.04 radiation 20.0 1440 < th dose independent rect. 23 7
939 24.04 wind 9.0 90 < th dose independent rect. 9 8
942 24.04 temperature 10.0 1440 > th dose independent rect. 6 17
948 24.04 radiation 20.0 10 < th dose independent rect. 5 23
962 24.05 temperature 10.0 90 > th dose dependent rect. 20 9
979 24.06 atmosphere 1015.0 90 < th dose dependent rect. 5 4
984 24.07 atmosphere 995.0 90 > th dose independent rect. 5 15
994 24.08 radiation 20.0 90 < th dose independent rect. 5 10