BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0512000 Os09g0512000|AK101417
(466 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0512000 SecY protein family protein 920 0.0
Os09g0347700 Similar to Sec61p 366 e-101
Os03g0213100 Similar to Sec61p 365 e-101
Os09g0347500 Similar to Protein transport protein Sec61 alp... 279 3e-75
Os03g0692300 238 1e-62
Os12g0627700 174 1e-43
Os12g0625966 142 4e-34
Os12g0612600 97 4e-20
Os09g0512600 82 8e-16
>Os09g0512000 SecY protein family protein
Length = 466
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/466 (96%), Positives = 452/466 (96%)
Query: 1 MSNRSKFWRLAALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEP 60
MSNRSKFWRLAALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEP
Sbjct: 1 MSNRSKFWRLAALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEP 60
Query: 61 DPLHWLHLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRL 120
DPLHWLHLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRL
Sbjct: 61 DPLHWLHLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRL 120
Query: 121 LGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTA 180
LGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTA
Sbjct: 121 LGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTA 180
Query: 181 TNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNII 240
TNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNII
Sbjct: 181 TNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNII 240
Query: 241 NFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCHIKLSHFLYGXXXXXXXXXXXXXXAS 300
NFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCHIKLSHFLYG AS
Sbjct: 241 NFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCHIKLSHFLYGPVVLHRLLLPLPYVAS 300
Query: 301 KVLYKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAF 360
KVLYKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAF
Sbjct: 301 KVLYKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAF 360
Query: 361 VLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVG 420
VLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVG
Sbjct: 361 VLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVG 420
Query: 421 GFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRASEVGSFGF 466
GFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRASEVGSFGF
Sbjct: 421 GFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRASEVGSFGF 466
>Os09g0347700 Similar to Sec61p
Length = 475
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/467 (45%), Positives = 285/467 (61%), Gaps = 19/467 (4%)
Query: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
A +PEVQ D+ I R+K YT I LFIF+ SQ+ LYGI T DP +W+ +ILA
Sbjct: 16 AFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHS---TTGADPFYWMRVILA 72
Query: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
S+R T++ GI I+ +++++ V KII +D S E L+N AQ+LLGIL+AI AV
Sbjct: 73 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGILIAIGEAV 132
Query: 132 NFYVR------SQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
+ + SQ T N +LI+LQ+ + IIVI LD++L+KGYGL SGISLF ATNIC
Sbjct: 133 AYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICE 192
Query: 186 NILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNIINFLAT 245
NI+WKAFSP ++ + EFEGAVIA HLL+TRTDK+ A+ +AFYRQNLPN+ N LAT
Sbjct: 193 NIIWKAFSPTTIN-SGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLAT 251
Query: 246 CLFVPLAIFFQGFYIVLPVRTR--RNFQAYCHIKLSHFLYGXXXXXXXXXXXXXXASKVL 303
L + I+FQGF +VLPVR++ R Q IKL + S++L
Sbjct: 252 VLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSALITNLYFISQLL 311
Query: 304 YKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAFVLI 363
Y++YSGN LVNLLGKW + G S+PVGG+ YY+ P LAD+ +PFHA YV F+L
Sbjct: 312 YRRYSGNFLVNLLGKWKESEYSGHSVPVGGLAYYVTAPSSLADVLANPFHALFYVVFMLS 371
Query: 364 SCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVGGFC 423
+C S + + S V ++E++ + +S E+ R++ AA GG C
Sbjct: 372 ACALFSKTWIEVSGSSA---KDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVC 428
Query: 424 AGVLIIFADLIGVFCSGTGIMLAVTASYPYVDG----RASEVGSFGF 466
G L + AD +G SGTGI+LAVT Y Y + RA+E+G FGF
Sbjct: 429 IGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 475
>Os03g0213100 Similar to Sec61p
Length = 475
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/467 (44%), Positives = 285/467 (61%), Gaps = 19/467 (4%)
Query: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
A +PEVQ D+ I R+K YT I LFIF+ SQ+ LYGI T DP +W+ +ILA
Sbjct: 16 AFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHS---TTGADPFYWMRVILA 72
Query: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
S+R T++ GI I+ +++++ V KII +D S E L+N AQ+LLGIL+AI AV
Sbjct: 73 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGILIAIGEAV 132
Query: 132 NFYVR------SQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
+ + SQ T N +LI+LQ+ + IIVI LD++L+KGYGL SGISLF ATNIC
Sbjct: 133 AYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICE 192
Query: 186 NILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNIINFLAT 245
NI+WKAFSP ++ + EFEGAVIA HLL+TRTDK+ A+ +AFYRQNLPN+ N LAT
Sbjct: 193 NIIWKAFSPTTIN-SGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLAT 251
Query: 246 CLFVPLAIFFQGFYIVLPVRTR--RNFQAYCHIKLSHFLYGXXXXXXXXXXXXXXASKVL 303
L + I+FQGF +VLPVR++ R Q IKL + S++L
Sbjct: 252 VLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSALITNLYFISQLL 311
Query: 304 YKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAFVLI 363
Y++YSGN LVNL+GKW + G S+PVGG+ YY+ P LAD+ +PFHA YV F+L
Sbjct: 312 YRRYSGNFLVNLIGKWKESEYSGHSVPVGGLAYYVTAPSSLADVLANPFHALFYVVFMLS 371
Query: 364 SCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVGGFC 423
+C S + + S V ++E++ + +S E+ R++ AA GG C
Sbjct: 372 ACALFSKTWIEVSGSSA---KDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVC 428
Query: 424 AGVLIIFADLIGVFCSGTGIMLAVTASYPYVDG----RASEVGSFGF 466
G L + AD +G SGTGI+LAVT Y Y + RA+E+G FGF
Sbjct: 429 IGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 475
>Os09g0347500 Similar to Protein transport protein Sec61 alpha subunit isoform 2
(Sec61 alpha- 2)
Length = 350
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 207/336 (61%), Gaps = 10/336 (2%)
Query: 137 SQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICVNILWKAFSPMS 196
SQ T N +LI+LQ+ + IIVI LD++L+KGYGL SGISLF ATNIC NI+WKAFSP +
Sbjct: 19 SQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTT 78
Query: 197 VMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNIINFLATCLFVPLAIFFQ 256
+ + EFEGAVIA HLL+TRTDK+ A+ +AFYRQNLPN+ N LAT L + I+FQ
Sbjct: 79 IN-SGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQ 137
Query: 257 GFYIVLPVRTR--RNFQAYCHIKLSHFLYGXXXXXXXXXXXXXXASKVLYKKYSGNTLVN 314
GF +VLPVR++ R Q IKL + S++LY++YSGN LVN
Sbjct: 138 GFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSALITNLYFISQLLYRRYSGNFLVN 197
Query: 315 LLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAFVLISCVFISMGLMV 374
LLGKW + G S+PVGG+ YY+ P LAD+ +PFHA YV F+L +C S +
Sbjct: 198 LLGKWKESEYSGHSVPVGGLAYYVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIE 257
Query: 375 CASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVGGFCAGVLIIFADLI 434
+ S V ++E++ + +S E+ R++ AA GG C G L + AD +
Sbjct: 258 VSGSSA---KDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFM 314
Query: 435 GVFCSGTGIMLAVTASYPYVDG----RASEVGSFGF 466
G SGTGI+LAVT Y Y + RA+E+G FGF
Sbjct: 315 GAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 350
>Os03g0692300
Length = 479
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 247/455 (54%), Gaps = 24/455 (5%)
Query: 13 LVPEVQCPDQPISP-RQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEP-DPLHWLHLIL 70
L+PEV+ PD P R+K TA LF F+ SQ+ LYG+ DP +W+ IL
Sbjct: 21 LLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLHRAAAAGGGADPFYWVRAIL 80
Query: 71 ASSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGA 130
AS+R T++ GI ++ LV++ V ++ D+S P+ L++ AQ+LL I++ A
Sbjct: 81 ASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDRALLSAAQKLLSIVITAGEA 140
Query: 131 VNFYVRSQHFTV------NTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNIC 184
+ + + +V N VL++LQ++ ++ I+LD++L+KGYG SGISLFTA N C
Sbjct: 141 TAYVLSGAYGSVGVLGAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGSGISLFTAANTC 200
Query: 185 VNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYR----QNLPNII 240
++ +A SP + M + EF GAV A HLL TR KLSA+ +AF+R +LP++
Sbjct: 201 EGVVTRALSP-ATMDRGRGAEFVGAVTAAAHLLATRARKLSAVREAFFRGGGGGSLPDLR 259
Query: 241 NFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCHIKLS-HFLYGXXXXXXXXXXXXXX- 298
ATC A++ QG + LPVR R +++ S LY
Sbjct: 260 GLAATCAVFLAAVYLQGVRVALPVRPRNAPRSHRGGAYSVRLLYTSGMPVVLLSSAVSSL 319
Query: 299 --ASKVLYKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFI 356
S+ LY+++ G+ LV+LLGKW ++PVGGI YY+ P A +P HA +
Sbjct: 320 YVVSQALYRRFGGSLLVDLLGKWT----PDAAVPVGGIAYYVTAPASAASAAANPLHAAM 375
Query: 357 YVAFVLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRA 416
YVAFVL +C +S +V + S + V ++E++ + ++ E+ R++ A
Sbjct: 376 YVAFVLAACAALSRAWVVVSGSS---SRDVARRLREQQMVMPGMREASMQRELERYIPAA 432
Query: 417 ACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTASY 451
A +GG C G L + ADL+G SG G++LAVT Y
Sbjct: 433 AALGGVCVGALTVAADLMGAVGSGAGMLLAVTTVY 467
>Os12g0627700
Length = 546
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 222/459 (48%), Gaps = 69/459 (15%)
Query: 24 ISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIE-PDPLHWLHLILASSRSTLLSHGI 82
+S R+K YTA L +F+ A Q+ LYG++ + PDPL+W++ + ASS +TL++ GI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 83 VAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGI----LVAILGAVNFYVRSQ 138
+ +L+ E+ V+I+ L IIT P V +NRA++LL I ++A+ G ++ V ++
Sbjct: 75 IPLLLSEMAVRIFSAL-IIT--RWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSAGVAAE 131
Query: 139 HFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICVNILWKAFSPMSVM 198
T+ ++++M Q+ +I IYLD++L+KGYGLLSG+SLF A N C I WKAF+
Sbjct: 132 LGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFWKAFTA---- 187
Query: 199 YPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPNIINFLATCLFVPLAIFFQGF 258
E ++ W ++ +F L + Q
Sbjct: 188 --------EDPLLHWAAII-----------------------------VFFKLVLQLQSC 210
Query: 259 YIVLPVRTRRN---FQAYCHIKLSHFLYGXXXXXXXXXXXXXXA-SKVLYKKY-SGNTLV 313
+I LP T + Q I S+ Y + S+ L KY N +V
Sbjct: 211 HITLPAVTSPDDPTLQTTYTISPSYMAYVPILFQPAFFSFPLVSISQTLSIKYGETNRVV 270
Query: 314 NLLGKWDGLNHF-GQSIPVGGIVYYLRTPPILADLHRDPFHAFIYVAFVLISCVFISM-G 371
NLLGKW + + G +PV I Y+ TPP ++ + +Y F+L C F+S+
Sbjct: 271 NLLGKWQQMCKYPGYYVPVARIASYVTTPPSFGEIVTGDPGSLLYAVFLLTGCAFLSLFC 330
Query: 372 LMVCASSKGVFNGFVVLNMQEERRLRLAQPD--------SIHANEIRRHVMRAACVGGFC 423
VCA S ++V + + ++ RL+ D SI + RR++ AA GFC
Sbjct: 331 FKVCAKSS---KRYLVRLVGKPKQTRLSPDDEQLPDEDESISPKQCRRYMTIAAIFVGFC 387
Query: 424 AGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRASEVG 462
G L + A +G+ G IMLAVT + V + G
Sbjct: 388 VGFLSLLAGFLGL--DGPAIMLAVTVIHSVVQDHSESDG 424
>Os12g0625966
Length = 425
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 220/484 (45%), Gaps = 104/484 (21%)
Query: 13 LVPEVQCPD------QPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWL 66
L+PEV+ +S R+K YTA+ L +F+ A ++LLYG+Q+ E DP +W+
Sbjct: 16 LLPEVEDSSTNAGGVMAVSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWM 75
Query: 67 HLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIITL-DTSAPETGVLMNRAQRLLGILV 125
+ + AS R T+++ G+V +L E++V + + LKII + D P+ + R +RL + +
Sbjct: 76 NAMSASLRPTVMALGLVPLLYSEMVVHLCMALKIIGVHDDRLPDHRRRLERTRRLFAMQI 135
Query: 126 AILGAVNFYVRSQH-------FTVNTVLIMLQILCSDIIVIYLDDVLRKGYGLLSGISLF 178
AI+ V + + T ++ + Q++ +I IYLDD+LRKGYG LSG+SLF
Sbjct: 136 AIVSPVAIVLYASAIAGGTPFITTAALVFVFQLIAGGLIAIYLDDLLRKGYGFLSGLSLF 195
Query: 179 TATNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTRTDKLSAMSKAFYRQNLPN 238
+A N C I WKA ++ YP W+ +L T
Sbjct: 196 SAANCCACIFWKA---LNHAYP------------WMMMLAT------------------- 221
Query: 239 IINFLATCLFVPLAIFFQGFYIVL-PVRTRRN--FQAYCHIKLSHFLYGXXXXXXXXXXX 295
F+ + I +I L PVR+ + + I +S+ Y
Sbjct: 222 ------LAFFLLVLIILGDHHITLPPVRSPADPTLRITHTISVSYLAYAPIILQPALLSF 275
Query: 296 XXXA-SKVLYKKY-SGNTLVNLLGKWDGLNHF-GQSIPVGGIVYYLRTPPILADLHRDPF 352
+ S++L KY N +VN+LG W + + G PV GI Y+ TP
Sbjct: 276 PFSSISQMLSIKYGETNKVVNMLGIWKEMRQYPGHYWPVSGIASYITTP----------- 324
Query: 353 HAFIYVAFVLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLA---------QPDS 403
L VC+ SK ++V +++ +R R++ + +S
Sbjct: 325 -------------------LTVCSRSK----RYLVRLLKKTQRTRVSPEQLLQEHDEDES 361
Query: 404 IHANEIRRHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRAS-EVG 462
I R ++ AA + G C G+L + A +G+ SG IMLAVT + V+GR + V
Sbjct: 362 ISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAVTVIHNLVEGRNTGHVA 421
Query: 463 SFGF 466
+FG
Sbjct: 422 AFGL 425
>Os12g0612600
Length = 483
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 151/334 (45%), Gaps = 35/334 (10%)
Query: 59 EPDPLHWLHLILASSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNR-- 116
+PDPL W +LA+ R T++ G+ ++ V+V++ L + ++ + L+ R
Sbjct: 71 DPDPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAALLFDSDSSTTVASCELLARCL 130
Query: 117 -----AQRLLGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIYLDDVLRKGYGL 171
A RL+ + A LG N L++LQ+ ++V+ D + GYG+
Sbjct: 131 AYVTNASRLVIGIAAALGMCG-----SGGAGNAALVVLQLFAGGVVVVLADLLHETGYGV 185
Query: 172 --LSGISLFTATNICVNILWKAFSPMSVMYPEQSPEFEGAVIAWVHLLMTR----TDKLS 225
+S SL ATN C + FSP+ + PEFEG V A H + K
Sbjct: 186 EGVSAASLLIATNACERAVSHLFSPVKLRLAGAGPEFEGPVFAVTHRVAAAPPSWRHKAG 245
Query: 226 AMSKAFYRQNLPNIINFLATCLFVPLAIFFQGFYI--VLPVRTRRNFQAYCHIKLSHFLY 283
A+ R +LPN+ N++ TC+ LA+ ++ + R RR + IKL LY
Sbjct: 246 ALLFTLLRLDLPNLSNYMTTCVMFVLAVRLDETHLRRLYRSRPRRGTDEFVPIKL---LY 302
Query: 284 GXXXXXXXXXXXXXXASKVLYKKYSGNT----LVNLLGKWDGLNHFGQSIPVGGIVYYLR 339
A VL+ SG +VNLLG+W G + PVGG+VYY+
Sbjct: 303 -TSAMPIMLHASAVSAFCVLHLHSSGGGGGGFVVNLLGRWKDAGG-GAAYPVGGLVYYV- 359
Query: 340 TPPILADLHRDP---FHAFIYVAFVLISCVFISM 370
TPP + L DP I+ FV+ SC +SM
Sbjct: 360 TPP--SKLLVDPGLIHELLIHSVFVVASCTLLSM 391
>Os09g0512600
Length = 213
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 240 INFLATCLFVPLAIFFQGFYIVLPVRTR--RNFQAYCHIKLSHFLYGXXXXXXXXXXXXX 297
+ LATC+ + +F +GF ++LP+R+R R Q IKL +
Sbjct: 1 MGLLATCVVLLATVFLEGFRVMLPLRSRDARGRQLALPIKLLYTSTMPVVLHSAAVSSLY 60
Query: 298 XASKVL-YKKYSGNTLVNLLGKWDGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHAFI 356
S++L Y +++G+ LLG W + +PVGG+ YY+ TPP HA
Sbjct: 61 TVSQLLHYSRFAGS----LLGTWKKTGYAAIPVPVGGVAYYV-TPPA------GLSHAAA 109
Query: 357 YVAFVLISCVFISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRA 416
Y A +L SC S G V S + L++Q + D+ + + R++ A
Sbjct: 110 YAASLLASCTLFS-GAWVEVSRSSAQDVARQLSVQRLALHGARERDAALRSHLSRYISTA 168
Query: 417 ACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRASE 460
A +GG C G L I AD+ G SGTGI+LA T Y +D E
Sbjct: 169 AALGGLCVGALTILADMTGAIGSGTGILLAATVVYNLIDAFQKE 212
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.330 0.143 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,313,665
Number of extensions: 539713
Number of successful extensions: 1354
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1325
Number of HSP's successfully gapped: 10
Length of query: 466
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 362
Effective length of database: 11,605,545
Effective search space: 4201207290
Effective search space used: 4201207290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 158 (65.5 bits)