BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0439700 Os09g0439700|AK120805
(532 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0439700 Lung seven transmembrane receptor family protein 986 0.0
Os11g0546100 Lung seven transmembrane receptor family protein 535 e-152
Os03g0334800 Lung seven transmembrane receptor family protein 510 e-145
Os07g0614600 Lung seven transmembrane receptor family protein 75 1e-13
>Os09g0439700 Lung seven transmembrane receptor family protein
Length = 532
Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/515 (94%), Positives = 485/515 (94%)
Query: 18 CVAVAXXXXXXXXXXEASVHEYRGLGFLNKGNAFILHAGSEGLYAPSSPXXXXXXXXXXX 77
CVAVA EASVHEYRGLGFLNKGNAFILHAGSEGLYAPSSP
Sbjct: 18 CVAVAGLLLMLLGGGEASVHEYRGLGFLNKGNAFILHAGSEGLYAPSSPANATTAEDDED 77
Query: 78 XXXXXXXXXFIRFDKITFRRPKDAAKETGSAMVQILVFEIEDREMIGGSAYGGQKAICCT 137
FIRFDKITFRRPKDAAKETGSAMVQILVFEIEDREMIGGSAYGGQKAICCT
Sbjct: 78 AAAAAVADAFIRFDKITFRRPKDAAKETGSAMVQILVFEIEDREMIGGSAYGGQKAICCT 137
Query: 138 SDLAKLGACTEGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFI 197
SDLAKLGACTEGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFI
Sbjct: 138 SDLAKLGACTEGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFI 197
Query: 198 HCDPSLAGLEIEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREV 257
HCDPSLAGLEIEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREV
Sbjct: 198 HCDPSLAGLEIEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREV 257
Query: 258 LPLQNCITLVITLGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIV 317
LPLQNCITLVITLGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIV
Sbjct: 258 LPLQNCITLVITLGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIV 317
Query: 318 SMGYGVVRPSLGGLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILD 377
SMGYGVVRPSLGGLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILD
Sbjct: 318 SMGYGVVRPSLGGLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILD 377
Query: 378 AAFVVWIFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVF 437
AAFVVWIFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVF
Sbjct: 378 AAFVVWIFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVF 437
Query: 438 NERWQYAWIIPAFWHVLSFSLLCVISYLWAPSQNSMRFTYDASENFDREDSLSLIRPGPI 497
NERWQYAWIIPAFWHVLSFSLLCVISYLWAPSQNSMRFTYDASENFDREDSLSLIRPGPI
Sbjct: 438 NERWQYAWIIPAFWHVLSFSLLCVISYLWAPSQNSMRFTYDASENFDREDSLSLIRPGPI 497
Query: 498 ASKNGWSLSSSPDTKATKNVTVTSFDGDDEENKRE 532
ASKNGWSLSSSPDTKATKNVTVTSFDGDDEENKRE
Sbjct: 498 ASKNGWSLSSSPDTKATKNVTVTSFDGDDEENKRE 532
>Os11g0546100 Lung seven transmembrane receptor family protein
Length = 514
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/506 (51%), Positives = 349/506 (68%), Gaps = 23/506 (4%)
Query: 33 EASVHEYRGLGFLNKGNAFILHAGSEGLYAPSSPXXXXXXXXXXXXXXXXXXXXFIRFDK 92
EAS+H Y F GNAF+L GSEG+ A + FI+F
Sbjct: 26 EASIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASS-------------FIKFTN 72
Query: 93 ITFRRPKDAAKETG-----SAMVQILVFEIEDREMIGGSAYGGQKAICCTSDLAKLGACT 147
+TF R ++A+ + +VQ ++FE DR+ IGGSAYGGQ++ICCT DLAKL C
Sbjct: 73 VTFWRTPESAESHAKMAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKLEGCK 132
Query: 148 EGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFIHCDPSLAGLE 207
+G VI RPS +P WP +L + F GS L ++ ITKTGMYN++FI CDP L GL
Sbjct: 133 QGEVIRRPSSDDPDWPYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKLRGLS 192
Query: 208 IEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREVLPLQNCITLV 267
+ G+TVW+NP GYLPGRMAPL F+ MS A++++ + W QY++FWR+++P+QN ITL+
Sbjct: 193 MSGKTVWRNPGGYLPGRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNWITLI 252
Query: 268 ITLGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIVSMGYGVVRPS 327
I LG+ EM+LWYFEY FN +GVRP GIT W VT G +++T++R++IL +SMGYGVVRP+
Sbjct: 253 IALGLFEMTLWYFEYLNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGVVRPT 312
Query: 328 LGGLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILDAAFVVWIFIS 387
LGGLTSKV++LG T+FLA+E+L++ EN+G +ND+SGKARLFLV P A LDA ++WIF S
Sbjct: 313 LGGLTSKVLLLGLTYFLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILWIFTS 372
Query: 388 LAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVFNERWQYAWII 447
L++TL+KLQARRS KLDIYRKFT ALAV+V+ S+ WIGYE+YFK+TD F+ERWQ AWII
Sbjct: 373 LSRTLEKLQARRSSVKLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQSAWII 432
Query: 448 PAFWHVLSFSLLCVISYLWAPSQNSMRFTYDA-SENFDREDSLSLIRPGPIASKNGWSLS 506
AFW VL+F LL VI YLWAPSQ+S R+ Y + + D E+S SL + + +
Sbjct: 433 TAFWDVLAFVLLLVICYLWAPSQSSQRYAYSGEAADDDDEESQSLTK----GTDGDVGMV 488
Query: 507 SSPDTKATKNVTVTSFDGDDEENKRE 532
++ + S + + EE+KRE
Sbjct: 489 KVDKDRSGGVSSAFSLEDEAEEDKRE 514
>Os03g0334800 Lung seven transmembrane receptor family protein
Length = 494
Score = 510 bits (1314), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/465 (53%), Positives = 331/465 (71%), Gaps = 23/465 (4%)
Query: 35 SVHEYRGLGFLNKGNAFILHAGSEGLYAPSSPXXXXXXXXXXXXXXXXXXXXFIRFDKIT 94
SVHEY G GF + N+F H GSEGLYA S P FIRFD +T
Sbjct: 24 SVHEYSGGGFAPRANSFFFHGGSEGLYA-SDPTSNSSAS-------------FIRFDSVT 69
Query: 95 FRRPKDAA-----KETGSAMVQILVFEIEDREMIGGSAYGGQKAICCTSDLAKLGACTEG 149
FRR +++A + + +V+ ++ EI+DR IGGS Y AICCT +L K +C G
Sbjct: 70 FRRTQESAGRHEAMQQKTGLVEAIIVEIQDRSKIGGS-YLHSDAICCTPELDKEKSCKVG 128
Query: 150 SVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFIHCDPSLAGLEIE 209
VI +P+ NP WP+ + + F G D A++ ++++ I KTGMY +YF+ CDP L GL+I
Sbjct: 129 EVIIQPNPDNPDWPKRVQTFFSGRDEEASMVTQVVSINKTGMYYLYFMFCDPQLKGLKIT 188
Query: 210 GQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREVLPLQNCITLVIT 269
G+TVW+NP GYLPG+MAP+ F+G MS A++VLG+ WF Q+++ W+++L L IT VI
Sbjct: 189 GRTVWRNPQGYLPGKMAPMMTFYGFMSLAYLVLGLLWFLQFVRCWKDILQLHYHITAVIA 248
Query: 270 LGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIVSMGYGVVRPSLG 329
LGM EM+ WYFEYA FN TG RP IT WAVTF VK+T++R+++L+VSMGYGVVRP+LG
Sbjct: 249 LGMCEMAFWYFEYANFNSTGNRPMAITLWAVTFTAVKKTISRLLLLVVSMGYGVVRPTLG 308
Query: 330 GLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILDAAFVVWIFISLA 389
G+TSKV LG +F+A+E LELVENLG +ND SGK RLFLV PVAILDA F++WIF SL+
Sbjct: 309 GVTSKVGALGVVYFIASEGLELVENLGNINDFSGKTRLFLVLPVAILDATFIIWIFSSLS 368
Query: 390 KTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVFNERWQYAWIIPA 449
+TL+KLQ RRSMAKL++YRKFT +LA++VL+SI WIGYE+YF +TD +E W+ AWIIPA
Sbjct: 369 RTLEKLQLRRSMAKLELYRKFTNSLALSVLISIAWIGYELYFNATDPLSELWRRAWIIPA 428
Query: 450 FWHVLSFSLLCVISYLWAPSQNSMRFTY--DASENFDREDSLSLI 492
FW+VLS+ LL +I LW+PS+N F Y D ++ D E+ LSL+
Sbjct: 429 FWNVLSYVLLAIICILWSPSRNPTGFAYSEDTADEAD-EEGLSLV 472
>Os07g0614600 Lung seven transmembrane receptor family protein
Length = 74
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 425 IGYEIYFKSTDVFNERWQYAWIIPAFWHVLSFSLLCVISYLWAPSQNSMRF 475
I +++FK+TD NERW+ AW+IPA W ++SF LLC I LW PSQNSMR+
Sbjct: 8 IKIQVHFKTTDEHNERWRVAWVIPAVWELISFFLLCTICILWTPSQNSMRY 58
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,025,868
Number of extensions: 641872
Number of successful extensions: 1189
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1183
Number of HSP's successfully gapped: 4
Length of query: 532
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 426
Effective length of database: 11,501,117
Effective search space: 4899475842
Effective search space used: 4899475842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)