BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0424600 Os09g0424600|AK073882
(536 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0424600 HAD superfamily (subfamily IG) hydrolase, 5\'-... 1048 0.0
Os01g0250900 HAD superfamily (subfamily IG) hydrolase, 5\'-... 144 2e-34
Os12g0180600 HAD superfamily (subfamily IG) hydrolase, 5\'-... 108 1e-23
Os03g0774300 HAD superfamily (subfamily IG) hydrolase, 5\'-... 107 2e-23
>Os09g0424600 HAD superfamily (subfamily IG) hydrolase, 5\'-Nucleotidase protein
Length = 536
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/519 (97%), Positives = 506/519 (97%)
Query: 18 VSRARHSSSLQGLRALSTLSTTLGSGAGXXXXXXXXXXXXXAKRNYLSIPVAIKDMAKMN 77
VSRARHSSSLQGLRALSTLSTTLGSGAG AKRNYLSIPVAIKDMAKMN
Sbjct: 18 VSRARHSSSLQGLRALSTLSTTLGSGAGEDEIERIRREFEDAKRNYLSIPVAIKDMAKMN 77
Query: 78 PQGIYVNKNVKLDDLQVYGFDYDYTLSHYSEHLQCLIYDLAKKHLVNELKYPESCLKYEY 137
PQGIYVNKNVKLDDLQVYGFDYDYTLSHYSEHLQCLIYDLAKKHLVNELKYPESCLKYEY
Sbjct: 78 PQGIYVNKNVKLDDLQVYGFDYDYTLSHYSEHLQCLIYDLAKKHLVNELKYPESCLKYEY 137
Query: 138 DHGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHIGRDQARQ 197
DHGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHIGRDQARQ
Sbjct: 138 DHGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHIGRDQARQ 197
Query: 198 LVGLMDVFCFSEACLLADIVQHFVDARLEFDASYVYEDVNQSIQHVHRSGLIHRKILSEP 257
LVGLMDVFCFSEACLLADIVQHFVDARLEFDASYVYEDVNQSIQHVHRSGLIHRKILSEP
Sbjct: 198 LVGLMDVFCFSEACLLADIVQHFVDARLEFDASYVYEDVNQSIQHVHRSGLIHRKILSEP 257
Query: 258 QKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLLEDEHFDGNSWRELFDVV 317
QKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLLEDEHFDGNSWRELFDVV
Sbjct: 258 QKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLLEDEHFDGNSWRELFDVV 317
Query: 318 IAQANKPTFYNSDHPFRVYDTQKDTLAFTAVDKFLPNEVYYHGCLKSFLQITKWRGPEVI 377
IAQANKPTFYNSDHPFRVYDTQKDTLAFTAVDKFLPNEVYYHGCLKSFLQITKWRGPEVI
Sbjct: 318 IAQANKPTFYNSDHPFRVYDTQKDTLAFTAVDKFLPNEVYYHGCLKSFLQITKWRGPEVI 377
Query: 378 YFGDHLLSDLRGPAKAGWRTAAVIRELEDEIEIQNGDSYRFQQAKLSIIHDLLGKVHATV 437
YFGDHLLSDLRGPAKAGWRTAAVIRELEDEIEIQNGDSYRFQQAKLSIIHDLLGKVHATV
Sbjct: 378 YFGDHLLSDLRGPAKAGWRTAAVIRELEDEIEIQNGDSYRFQQAKLSIIHDLLGKVHATV 437
Query: 438 VSTEKGQVYRALLDELNAERRQCRSAMRDLFNSSFGATFLTDTGRESSFAYHIHQYADIY 497
VSTEKGQVYRALLDELNAERRQCRSAMRDLFNSSFGATFLTDTGRESSFAYHIHQYADIY
Sbjct: 438 VSTEKGQVYRALLDELNAERRQCRSAMRDLFNSSFGATFLTDTGRESSFAYHIHQYADIY 497
Query: 498 TSKLENFLSYAPESWLHPPHDIKIMPHNAKVPASLFSGS 536
TSKLENFLSYAPESWLHPPHDIKIMPHNAKVPASLFSGS
Sbjct: 498 TSKLENFLSYAPESWLHPPHDIKIMPHNAKVPASLFSGS 536
>Os01g0250900 HAD superfamily (subfamily IG) hydrolase, 5\'-Nucleotidase protein
Length = 579
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 169/340 (49%), Gaps = 14/340 (4%)
Query: 77 NPQGIYVNKNVKLDDLQVYGFDYDYTLSHYS-EHLQCLIYDLAKKHLVNELKYPESCLKY 135
+P+GI+ + + L + V G+D DYTL HY+ + YD +L + +P L
Sbjct: 156 SPRGIFCTRTLNLRSISVIGYDMDYTLIHYNVMAWEGRAYDYGMANL-KGMGFPVDDL-- 212
Query: 136 EYDHGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHIGRDQA 195
E+D IRGL D+ KG L+K D FG I+ G LS S + E+YG + +
Sbjct: 213 EFDPDLVIRGLIMDKDKGNLVKADRFGYIK--RAMHGTQMLSTSAVSEIYGRELVDLRKE 270
Query: 196 RQLVGLMDVFCFSEACLLADIV----QHFVDARL-EFDASYVYEDVNQSIQHVHRSGLIH 250
+ L +F SEA + +V Q V A L D +Y V++++ H G +
Sbjct: 271 SRWEFLNTLFSVSEAVMFMQMVDKLDQGLVPAELGPLDYKGLYNAVSRALFRAHVEGQLK 330
Query: 251 RKILSEPQKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLLEDEHFDGNSW 310
+I++EP++++ + ++ L +E GK L L+TNS +++ + M++ + +W
Sbjct: 331 SEIMAEPERFVEPDPELPLALLDQKEAGKRLLLITNSDYHYTNKMMNHAFNRFLPNDMAW 390
Query: 311 RELFDVVIAQANKPTFYNSDHPFRVYDTQKDTLAFTAVDKFLPNEVYYHGCLKSFLQITK 370
R+LF++VI A KP F+ HP +Y+ + K +Y G + +
Sbjct: 391 RDLFEMVIVSARKPEFFQISHP--LYEVVTNDGLMRPCFKANSGGLYSGGSAQMVEKSLD 448
Query: 371 WRGPEVIYFGDHLLSDL-RGPAKAGWRTAAVIRELEDEIE 409
G E++Y GDH+ +D+ + WRTA + RELEDE +
Sbjct: 449 IHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEDEFD 488
>Os12g0180600 HAD superfamily (subfamily IG) hydrolase, 5\'-Nucleotidase protein
Length = 905
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 138/267 (51%), Gaps = 10/267 (3%)
Query: 79 QGIYVNKNVKLDDLQVYGFDYDYTLSHYSEHLQCLIYDLAKKHLVNELKYPESCLKYEYD 138
Q I+ ++ V ++D++ GF +YTL +Y + L Y AKK LVN KYPE L++ Y+
Sbjct: 380 QQIFCSRTVNMEDIKAIGFKMEYTLINYKVTFENLAYVEAKKRLVNG-KYPEKILEWNYN 438
Query: 139 HGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSEIKELYGTRHIGRDQARQL 198
IRGL D+ KG ++K+D + +++ + G +++ E K +YG+ + + +
Sbjct: 439 SEHMIRGLIIDKKKGNIIKVDHYNNVK--MSYHGMNEMPYEESKNVYGSTFMFEEP--EF 494
Query: 199 VGLMDVFCFSEACLLADIVQHFVDARLEFDASY---VYEDVNQSIQHVHRSGLIHRKILS 255
+ F E L A +V E A +Y+ + ++ ++ G + + + +
Sbjct: 495 AAMDTTFSCCEGYLFAQLVDLMDTNPQEVPAPTYMTLYKHLREAFDQGYKDGTLKQSVAN 554
Query: 256 EPQKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLLEDEHFDGNSWRELFD 315
+ +Y+ K+ + L+ ++ KG + FL+T+S + + D M Y L + + +SW + FD
Sbjct: 555 DLARYIDKDPSLLPMLQNIKNKGISTFLITDSLWDYTDIVMDYALHQDKVNKHSWLQYFD 614
Query: 316 VVIAQANKPTFYNSDHPFRVYDTQKDT 342
+V + +F++ + ++D + +T
Sbjct: 615 IVFTGSR--SFFSEESHVELFDVEIET 639
>Os03g0774300 HAD superfamily (subfamily IG) hydrolase, 5\'-Nucleotidase protein
Length = 348
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 44/339 (12%)
Query: 228 DASYVYEDVNQSIQHVHRSGLIHRKILSEPQKYLIKNSQVFRFLKMLREKGKNLFLLTNS 287
D +Y DV ++ HR G + R + +P +Y+ ++ + L+M+R+ G++ FL+TNS
Sbjct: 13 DYPLMYRDVRSAVDLCHRDGTLKRMVAKDPSRYINEDLAIVPMLEMIRKSGRSTFLVTNS 72
Query: 288 PFYFVDGGMSYLLEDEHFDGNS-----WRELFDVVIAQANKPTFYNSDHPFRVYDTQKDT 342
+ + D M+YL D +S W FDVVI + KP F++ + +++ + D+
Sbjct: 73 LWDYTDVVMNYLCRPYTSDVSSSHNHKWLGYFDVVITGSAKPGFFHDGNRAGLFEVEPDS 132
Query: 343 LAFTAVDKFL-----------PNEVYYHGC----LKSFLQITKWRGPEVIYFGDHLLSD- 386
D + P Y G L L + +++Y GDH+ D
Sbjct: 133 GKLLNADLHIGSPRSGQQPSRPIHKIYQGGNVGHLHRLLSVAS--SSQILYVGDHIYGDI 190
Query: 387 LRGPAKAGWRTAAVIRELEDEIE-IQNGDSYRFQQAKLSIIHDLL-GKVH--------AT 436
LR GWRT VI ELE E++ + S R + L + D + K+H
Sbjct: 191 LRSKKVLGWRTMLVIPELEQEVKLLSESKSTRKELRHLRMERDSIEDKIHRLEWSLKFEN 250
Query: 437 VVSTEKGQVYRA---LLDELNAERRQCRSAMRD---LFNSSFGATFLTDTGRESS-FAYH 489
+ EK +++ LL + RR + A R F+ +G L TG ++S FA+
Sbjct: 251 LTEDEKEKLFSEHDILLQKKEHVRRLHQEAQRQHHHKFHKVWGQ--LMKTGYQNSRFAHQ 308
Query: 490 IHQYADIYTSKLENFLSYAPESWLHPPHDIKIMPHNAKV 528
+ ++A +Y+S++ NF Y+P + P D MPH V
Sbjct: 309 VERFACLYSSQVTNFALYSPNKYYRPSED--YMPHEFDV 345
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,402,186
Number of extensions: 716588
Number of successful extensions: 1298
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1287
Number of HSP's successfully gapped: 4
Length of query: 536
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 430
Effective length of database: 11,501,117
Effective search space: 4945480310
Effective search space used: 4945480310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)