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Os03g0774300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0207) R2 : 0.696
β1 : -1.77 (0.0756) R2dD : 0.378 R2D : 0.326
β2 : 1.16 (0.0522) R2dC : 0.331 R2C : 0.313
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.336 (0.0441) R2dN8 : 0.0519 R2N8 : -0.0118
σ : 0.388
deviance : 68.69
__
_____
C
peak time of C : 8.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.68 0.366 12.4 -0.749 1.15 -0.377 0.821 5.72 -0.222 8.41 29.91 2712 -- --
65.05 0.376 12.5 -1.77 1.26 0.263 1.11 -- -0.41 8.31 33.8 19174 -- --
62.72 0.369 12.4 -0.748 1.15 -0.384 -- 5.75 -0.239 8.38 30 2762 -- --
65.73 0.378 12.5 -1.88 1.17 0.35 -- -- -0.44 8.32 34.1 15772 -- --
133.78 0.539 12.4 -0.286 -- -0.512 -- 6.25 -0.0495 -- 29.51 2766 -- --
66.8 0.383 12.5 -1.79 1.16 -- 0.783 -- -0.335 8.28 -- -- -- --
68.69 0.388 12.5 -1.77 1.16 -- -- -- -0.336 8.26 -- -- -- --
140.56 0.552 12.6 -1.83 -- 0.236 -- -- -0.412 -- 33.2 17283 -- --
107.99 0.484 12.4 -- 1.17 -0.938 -- -- 0.17 8.13 26.12 47520 -- --
143.1 0.559 12.5 -1.76 -- -- -- -- -0.323 -- -- -- -- --
151.02 0.575 12.5 -- 1.15 -- -- -- -0.139 8.37 -- -- -- --
162.15 0.593 12.4 -- -- -1.26 -- -- 0.171 -- 18.31 47520 -- --
224.74 0.7 12.5 -- -- -- -- -- -0.128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.00 temperature 10.0 270 > th dose dependent rect. 3 6
7 49.96 temperature 10.0 270 > th dose dependent rect. 20 7
8 50.11 radiation 30.0 270 < th dose independent rect. 3 6
9 50.31 humidity 70.0 270 > th dose independent rect. 3 6
10 50.81 temperature 15.0 270 > th dose dependent rect. 4 3
12 50.87 precipitation 0.1 270 < th dose independent rect. 3 17
13 50.87 precipitation 0.1 270 < th dose dependent rect. 3 17
14 50.88 humidity 70.0 270 > th dose independent rect. 2 8
21 51.08 humidity 50.0 270 > th dose dependent rect. 3 6
23 51.17 precipitation 0.1 270 < th dose independent rect. 16 15
24 51.17 precipitation 0.1 270 < th dose dependent rect. 16 15
27 51.26 wind 9.0 270 < th dose independent rect. 9 18
29 51.34 precipitation 0.1 270 < th dose independent rect. 3 6
30 51.34 precipitation 0.1 270 < th dose dependent rect. 3 6
31 51.40 temperature 20.0 10 > th dose independent rect. 22 7
34 51.42 atmosphere 1000.0 270 > th dose independent rect. 21 6
38 51.47 radiation 40.0 270 < th dose dependent rect. 3 6
41 51.50 temperature 15.0 270 > th dose independent rect. 20 7
47 51.62 temperature 15.0 10 > th dose dependent rect. 22 7
48 51.63 atmosphere 995.0 270 > th dose independent rect. 9 18
49 51.64 humidity 50.0 270 > th dose dependent rect. 2 9
50 51.66 wind 7.0 270 < th dose independent rect. 3 6
55 51.72 temperature 30.0 270 < th dose independent rect. 3 6
56 51.72 wind 9.0 270 < th dose independent rect. 7 9
62 51.78 temperature 10.0 270 > th dose independent rect. 3 6
65 51.78 atmosphere 995.0 270 > th dose independent rect. 3 6
66 51.78 atmosphere 1015.0 270 < th dose independent rect. 3 6
67 51.78 temperature 10.0 270 > th dose independent rect. 9 18
76 51.90 precipitation 0.1 270 < th dose independent rect. 20 7
77 51.90 precipitation 0.1 270 < th dose dependent rect. 20 7
80 51.98 temperature 30.0 270 < th dose independent rect. 20 7
81 51.98 humidity 50.0 270 > th dose independent rect. 20 7
85 51.98 radiation 1.0 270 < th dose independent rect. 20 7
91 51.98 temperature 10.0 270 > th dose independent rect. 3 17
92 51.98 atmosphere 1015.0 270 < th dose independent rect. 3 17
93 51.98 radiation 1.0 270 < th dose dependent rect. 20 7
99 51.99 wind 9.0 270 < th dose independent rect. 20 7
101 52.00 precipitation 0.1 270 < th dose independent rect. 7 9
102 52.00 precipitation 0.1 270 < th dose dependent rect. 7 9
104 52.01 wind 9.0 270 < th dose independent rect. 22 16
106 52.02 wind 9.0 270 < th dose dependent rect. 3 6
108 52.04 temperature 10.0 270 > th dose independent rect. 7 9
109 52.04 atmosphere 1015.0 270 < th dose independent rect. 7 9
110 52.04 temperature 10.0 270 > th dose independent rect. 16 15
111 52.04 radiation 40.0 270 < th dose independent rect. 16 15
112 52.05 precipitation 0.1 270 < th dose independent rect. 14 8
113 52.05 precipitation 0.1 270 < th dose dependent rect. 14 8
120 52.14 temperature 10.0 270 > th dose independent rect. 14 8
121 52.14 temperature 10.0 270 > th dose independent rect. 22 16
122 52.14 atmosphere 995.0 270 > th dose independent rect. 22 16
123 52.14 precipitation 0.1 270 < th dose independent rect. 9 18
125 52.14 precipitation 0.1 270 < th dose dependent rect. 9 18
155 52.35 radiation 1.0 90 < th dose dependent rect. 21 19
178 52.41 temperature 20.0 10 > th dose dependent rect. 5 4
185 52.46 temperature 20.0 270 > th dose independent rect. 4 3
187 52.47 wind 9.0 270 < th dose independent rect. 16 15
189 52.48 atmosphere 995.0 270 > th dose independent rect. 7 9
191 52.50 humidity 50.0 90 > th dose independent rect. 17 16
200 52.54 atmosphere 1000.0 270 > th dose independent rect. 22 4
203 52.54 radiation 1.0 90 < th dose dependent rect. 21 11
207 52.55 atmosphere 1015.0 270 < th dose dependent rect. 15 6
209 52.56 radiation 1.0 90 < th dose dependent rect. 21 14
210 52.56 radiation 1.0 90 < th dose dependent rect. 21 16
222 52.62 wind 1.0 270 > th dose independent rect. 14 8
237 52.64 wind 9.0 270 < th dose independent rect. 3 17
254 52.68 radiation 40.0 270 < th dose independent rect. 14 8
255 52.68 precipitation 0.1 270 < th dose independent rect. 22 16
257 52.68 precipitation 0.1 270 < th dose dependent rect. 22 16
268 52.74 radiation 40.0 270 < th dose independent rect. 3 17
293 52.90 wind 9.0 270 < th dose independent rect. 14 8
309 52.99 radiation 1.0 90 < th dose independent rect. 21 10
326 53.05 atmosphere 1015.0 270 < th dose independent rect. 22 16
337 53.10 humidity 60.0 10 > th dose independent rect. 5 17
359 53.18 radiation 1.0 90 < th dose independent rect. 21 19
378 53.27 radiation 10.0 10 < th dose dependent rect. 22 8
385 53.30 humidity 50.0 270 > th dose dependent rect. 20 7
389 53.31 radiation 1.0 90 < th dose independent rect. 21 14
390 53.31 radiation 1.0 90 < th dose independent rect. 21 16
408 53.34 atmosphere 1000.0 10 > th dose independent rect. 22 7
414 53.37 atmosphere 1015.0 270 < th dose independent rect. 14 8
431 53.45 atmosphere 995.0 90 > th dose independent rect. 17 16
440 53.49 radiation 1.0 270 > th dose independent rect. 8 8
446 53.53 humidity 50.0 270 > th dose independent rect. 22 16
447 53.53 atmosphere 1015.0 270 < th dose dependent rect. 16 4
448 53.53 radiation 40.0 270 < th dose dependent rect. 16 16
451 53.55 radiation 1.0 90 > th dose independent rect. 18 15
458 53.56 wind 7.0 270 < th dose dependent rect. 4 3
460 53.56 temperature 15.0 10 > th dose dependent rect. 5 6
471 53.60 radiation 1.0 90 < th dose dependent sin 9 NA
493 53.64 wind 9.0 270 < th dose independent rect. 7 21
519 53.72 radiation 1.0 30 > th dose independent sin 8 NA
526 53.74 humidity 50.0 270 > th dose independent rect. 9 18
528 53.75 radiation 1.0 90 > th dose independent sin 10 NA
550 53.79 temperature 10.0 10 > th dose dependent rect. 20 9
554 53.80 wind 1.0 270 > th dose independent rect. 20 7
619 53.91 radiation 40.0 270 < th dose dependent rect. 3 17
625 53.93 radiation 40.0 10 < th dose independent rect. 5 6
659 54.01 temperature 20.0 30 > th dose independent rect. 5 15
667 54.03 temperature 20.0 270 > th dose independent rect. 5 1
668 54.03 radiation 10.0 10 < th dose dependent rect. 20 10
698 54.09 humidity 60.0 10 > th dose independent rect. 5 15
702 54.10 atmosphere 995.0 270 > th dose independent rect. 7 21
703 54.10 atmosphere 995.0 270 > th dose dependent rect. 21 6
722 54.12 humidity 50.0 270 > th dose dependent rect. 4 3
724 54.13 radiation 1.0 30 > th dose independent rect. 5 4
726 54.13 atmosphere 1015.0 270 < th dose independent rect. 21 6
751 54.15 wind 1.0 90 > th dose independent rect. 9 8
756 54.16 temperature 20.0 10 > th dose independent rect. 5 4
765 54.17 temperature 10.0 270 > th dose independent rect. 4 3
767 54.17 temperature 30.0 270 < th dose independent rect. 4 3
768 54.17 humidity 50.0 270 > th dose independent rect. 4 3
770 54.17 atmosphere 995.0 270 > th dose independent rect. 4 3
771 54.17 atmosphere 1015.0 270 < th dose independent rect. 4 3
775 54.17 temperature 10.0 270 > th dose independent rect. 7 21
778 54.18 humidity 50.0 270 > th dose independent rect. 3 17
787 54.22 radiation 1.0 270 > th dose independent rect. 18 12
820 54.27 wind 9.0 270 < th dose dependent rect. 9 17
864 54.33 temperature 20.0 10 > th dose independent rect. 20 9
949 54.44 precipitation 0.1 10 < th dose independent rect. 5 17
954 54.44 precipitation 0.1 10 < th dose dependent rect. 5 17
970 54.47 temperature 20.0 10 > th dose independent rect. 5 17
990 54.50 atmosphere 1015.0 270 < th dose independent rect. 9 17
996 54.51 radiation 1.0 90 < th dose independent sin 10 NA
997 54.51 wind 9.0 10 < th dose independent rect. 22 7
999 54.51 temperature 30.0 10 < th dose independent rect. 22 7
1000 54.51 humidity 50.0 10 > th dose independent rect. 22 7