BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0423600 Os09g0423600|009-013-C09
         (239 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0423600  Similar to Monogalactosyldiacylglycerol syntha...   489   e-139
Os02g0802700  Similar to MGDG synthase type A                     310   5e-85
Os08g0299400  Similar to MGDG synthase type A                     296   6e-81

>Os09g0423600 Similar to Monogalactosyldiacylglycerol synthase (EC 2.4.1.46)
          Length = 239

 Score =  489 bits (1260), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/239 (100%), Positives = 239/239 (100%)

Query: 1   CYCPSAEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMG 60
           CYCPSAEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMG
Sbjct: 1   CYCPSAEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMG 60

Query: 61  GGEGMGPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFV 120
           GGEGMGPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFV
Sbjct: 61  GGEGMGPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFV 120

Query: 121 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKS 180
           TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKS
Sbjct: 121 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKS 180

Query: 181 PEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQKCFVPQYACAS 239
           PEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQKCFVPQYACAS
Sbjct: 181 PEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQKCFVPQYACAS 239



>Os02g0802700 Similar to MGDG synthase type A
          Length = 406

 Score =  310 bits (794), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 155/229 (67%), Positives = 194/229 (84%)

Query: 1   CYCPSAEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMG 60
           CYCPS EV+KRA    LQPSQI+V+GLP+RPSF + +  +D+LR+EL +D  LPAVLLMG
Sbjct: 151 CYCPSEEVAKRAALDDLQPSQIRVFGLPIRPSFCRAVLVKDDLRKELELDPELPAVLLMG 210

Query: 61  GGEGMGPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFV 120
           GGEGMGP++ TA+ALG++L+D+ LG+P GQ++VICGRNK L+S LQ++ WK+P++V+GF 
Sbjct: 211 GGEGMGPVKKTAKALGESLFDKELGKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGFE 270

Query: 121 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKS 180
           T+ME+ MGACDCIITKAGPGTIAEA+IRGLPIILN +I GQE GNVPYVVDNG G FSKS
Sbjct: 271 TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKS 330

Query: 181 PEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQK 229
             + AK+VA WFGP SDELK MS+ ALKLA+P+AVF IV D+HEL R++
Sbjct: 331 SRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQ 379



>Os08g0299400 Similar to MGDG synthase type A
          Length = 408

 Score =  296 bits (759), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 155/234 (66%), Positives = 184/234 (78%)

Query: 1   CYCPSAEVSKRALKAGLQPSQIKVYGLPVRPSFVKPIRPEDELRRELGMDEYLPAVLLMG 60
           CYCPSAEV+KRAL  GL+PSQI+VYGLP+RPSF + +  +DELR+EL MD  LPAVLLMG
Sbjct: 162 CYCPSAEVAKRALLRGLEPSQIRVYGLPIRPSFCRAVLDKDELRKELDMDPDLPAVLLMG 221

Query: 61  GGEGMGPIEATARALGDALYDEVLGEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFV 120
           GGEGMGP+E TARAL D LYD     P GQI+VICGRN+ L S LQS  W VPV+++GF 
Sbjct: 222 GGEGMGPVEETARALSDELYDRRRRRPVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFE 281

Query: 121 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKS 180
            +ME+ MGACDCIITKAGPGTIAEA+IRGLPIILN +I GQE GNVPYVVDNG G FSK 
Sbjct: 282 KQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKD 341

Query: 181 PEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQKCFVPQ 234
           P + A+ VA WF   ++EL+  S NALKLA+P+AVF IV D+H+L +Q   V +
Sbjct: 342 PREAARQVARWFTTHTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQPATVTR 395



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.139    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,567,351
Number of extensions: 376827
Number of successful extensions: 932
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 932
Number of HSP's successfully gapped: 3
Length of query: 239
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 141
Effective length of database: 11,918,829
Effective search space: 1680554889
Effective search space used: 1680554889
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)