BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0252100 Os09g0252100|AK102536
(401 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase 767 0.0
Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase 613 e-176
Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ket... 182 3e-46
Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment) 178 6e-45
>Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase
Length = 401
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/401 (96%), Positives = 386/401 (96%)
Query: 1 MASDNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFF 60
MASDNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFF
Sbjct: 1 MASDNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFF 60
Query: 61 GNVLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAG 120
GNVLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAG
Sbjct: 61 GNVLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAG 120
Query: 121 GMESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTRE 180
GMESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTRE
Sbjct: 121 GMESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTRE 180
Query: 181 DQDAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLR 240
DQDAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLR
Sbjct: 181 DQDAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLR 240
Query: 241 PSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTS 300
PSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTS
Sbjct: 241 PSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTS 300
Query: 301 PALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLG 360
PALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLG
Sbjct: 301 PALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLG 360
Query: 361 CSGARILVTLLGVLREKXXXXXXXXXXXXXXXASALVLELA 401
CSGARILVTLLGVLREK ASALVLELA
Sbjct: 361 CSGARILVTLLGVLREKGGKIGVAGVCNGGGGASALVLELA 401
>Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase
Length = 416
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/398 (74%), Positives = 347/398 (87%), Gaps = 1/398 (0%)
Query: 3 SDNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGN 62
SD + RDVC+VGVARTP+G LG+LSSL ATKLGS+AI+AAL+RANV+PALVQEVF GN
Sbjct: 9 SDLLKPRDVCIVGVARTPIGALLGSLSSLPATKLGSVAIQAALRRANVEPALVQEVFMGN 68
Query: 63 VLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGM 122
VLSANLGQAPARQAALGAG+P+TV C+ VNKVC+SGMKA M AAQ+I LG++D+VVAGGM
Sbjct: 69 VLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGM 128
Query: 123 ESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQ 182
ESMSNAPKY+A AR+GSRFGHD L+DGMLKDGLWDVY DF MG CAELCAD H+++RE+Q
Sbjct: 129 ESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQ 188
Query: 183 DAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLRPS 242
D YAIQSNER IAAR+SG F+WEI P+E+ GRGKPP++VDKDE L KF+ KL+KL P+
Sbjct: 189 DLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKFNSAKLRKLGPT 248
Query: 243 FKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTSPA 302
FK+N G+VTAGN+SSISDGAAA+VLVSGQKA+ LGLQVIARI+G+ADAAQAPELFTT+PA
Sbjct: 249 FKKN-GSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPA 307
Query: 303 LAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLGCS 362
LAIPKA++NAGL++S++DYYEINEAFS VALANQKLLGIPS K+N+ GG VSLGHP+GCS
Sbjct: 308 LAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCS 367
Query: 363 GARILVTLLGVLREKXXXXXXXXXXXXXXXASALVLEL 400
GARI+VTLLG+LR K ASALV+EL
Sbjct: 368 GARIIVTLLGILRHKNGKIGVAGVCNGGGGASALVVEL 405
>Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b)
(EC 2.3.1.16) (Fragment)
Length = 461
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 201/379 (53%), Gaps = 27/379 (7%)
Query: 10 DVCVVGVARTPM-----GGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVL 64
DV +V RT + GGF A L +A + + ++P+ V ++ G VL
Sbjct: 50 DVVIVAAYRTAICKSKRGGF----KDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTVL 105
Query: 65 SANLGQA-PARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGME 123
+ +A R AA AG P+TV VN+ C+SG++A A +I G+ DI +A G+E
Sbjct: 106 APGSQRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLE 165
Query: 124 SMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQD 183
SM+ + + R + + +D L MG +E A +TR +QD
Sbjct: 166 SMT-----VNQVRLDGQVNPKVELFSQARDCL------LPMGLTSENVAKRFGITRMEQD 214
Query: 184 AYAIQSNERGIAARNSGAFAWEIVPIEV----PVGRGKPPVLVDKDEGLDKFDPVK-LKK 238
A++S+ + AA SG F EIVP+ P + ++V D+G+ + L K
Sbjct: 215 QAAVESHRKAAAAAASGKFKEEIVPVHTKIVDPKTGEEKEIVVSADDGIRPGTSLAVLSK 274
Query: 239 LRPSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFT 298
L+P+F ++G T TAGNAS +SDGA A++L+ A + GL ++ + FA P +
Sbjct: 275 LKPAFSKDG-TTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVFRSFAAVGVDPAIMG 333
Query: 299 TSPALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHP 358
PA+AIP A+ AGL+ VD +EINEAF++ + K LG+ K+NV+GGA++LGHP
Sbjct: 334 VGPAVAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPAKVNVNGGAMALGHP 393
Query: 359 LGCSGARILVTLLGVLREK 377
LG +GAR + TLL ++ +
Sbjct: 394 LGATGARSVSTLLNEMKRR 412
>Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment)
Length = 448
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 198/384 (51%), Gaps = 37/384 (9%)
Query: 10 DVCVVGVARTPM-GGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVLSANL 68
DV VV RTP+ G L ++ ++A L ++P + ++ G VL
Sbjct: 48 DVVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGS 107
Query: 69 GQA-PARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGMESMS- 126
+A R AA AG+P V VN+ C+SG++A A +I G DI + G+ESMS
Sbjct: 108 QRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSV 167
Query: 127 NA--------PKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALT 178
NA PK + E +K D L MG +E A + +T
Sbjct: 168 NAMGWEGQVNPK-VNEVQKA----QDCL---------------LPMGITSENVAHRYGVT 207
Query: 179 REDQDAYAIQSNERGIAARNSGAFAWEIVPIEV----PVGRGKPPVLVDKDEGLDKFDPV 234
R++QD A +S+ R AA +G F EIVP+ P + V++ D+G+
Sbjct: 208 RQEQDQAAAESHRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTA 267
Query: 235 K-LKKLRPSFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQA 293
L KL+P F+++G T TAGN+S +SDGA A++L+ A + GL ++ + FA
Sbjct: 268 SGLAKLKPVFRKDG-TTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFAAVGVD 326
Query: 294 PELFTTSPALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAV 353
P + PA+AIP A+ +AGL+ +D +E+NEAF++ + LG+ K+NV+GGA+
Sbjct: 327 PAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAI 386
Query: 354 SLGHPLGCSGARILVTLLGVLREK 377
+LGHPLG +GAR + TLL ++ +
Sbjct: 387 ALGHPLGATGARCVATLLNEMKRR 410
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,822,452
Number of extensions: 539942
Number of successful extensions: 1361
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1353
Number of HSP's successfully gapped: 4
Length of query: 401
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 298
Effective length of database: 11,657,759
Effective search space: 3474012182
Effective search space used: 3474012182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)