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Os09g0252100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Acetyl-CoA C-acetyltransferase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.26 (0.0156) R2 : 0.3
β1 : 0.796 (0.0571) R2dD : 0.31 R2D : 0.279
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.106 (0.0333) R2dN8 : 0.0208 R2N8 : -0.0108
σ : 0.292
deviance : 39.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.34 0.275 7.27 0.783 0.2 -0.391 -0.674 0.239 0.0507 6.03 69.59 1575 -- --
34.41 0.273 7.27 0.803 0.192 -0.367 -0.649 -- 0.0574 6.08 69.09 1560 -- --
35.41 0.277 7.27 0.78 0.187 -0.382 -- 0.192 0.0559 6.39 69.5 1548 -- --
35.43 0.277 7.27 0.8 0.185 -0.365 -- -- 0.0613 6.6 69 1535 -- --
36.83 0.283 7.27 0.784 -- -0.39 -- 0.122 0.0595 -- 69.02 1388 -- --
36.62 0.284 7.26 0.8 0.177 -- -0.621 -- 0.1 6.46 -- -- -- --
37.53 0.287 7.26 0.793 0.175 -- -- -- 0.103 7.04 -- -- -- --
36.84 0.283 7.27 0.798 -- -0.38 -- -- 0.0631 -- 68.43 1386 -- --
51.03 0.333 7.28 -- 0.237 -0.448 -- -- 0.00896 8.74 40.83 1061 -- --
39.15 0.292 7.26 0.796 -- -- -- -- 0.106 -- -- -- -- --
54.1 0.344 7.28 -- 0.184 -- -- -- 0.0143 6.77 -- -- -- --
52.8 0.338 7.28 -- -- -0.362 -- -- 0.00528 -- 34.86 1365 -- --
55.88 0.349 7.28 -- -- -- -- -- 0.0174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.31 precipitation 0.1 14400 > th dose independent rect. 18 2
2 33.32 precipitation 0.1 14400 < th dose independent rect. 18 2
3 33.32 precipitation 0.1 14400 < th dose dependent rect. 18 2
4 33.42 precipitation 0.1 14400 > th dose dependent rect. 18 2
14 33.62 radiation 30.0 10 < th dose independent rect. 5 22
19 33.67 atmosphere 1015.0 90 < th dose dependent rect. 10 13
22 33.71 temperature 20.0 720 > th dose independent rect. 5 1
23 33.71 temperature 20.0 1440 < th dose independent rect. 4 1
26 33.71 atmosphere 1015.0 10 < th dose dependent rect. 10 13
31 33.73 temperature 20.0 720 > th dose dependent rect. 5 2
34 33.76 atmosphere 995.0 90 > th dose dependent rect. 5 13
40 33.81 humidity 70.0 1440 > th dose dependent rect. 18 1
46 33.83 radiation 40.0 10 < th dose dependent rect. 5 22
58 33.87 temperature 20.0 30 > th dose independent rect. 11 18
62 33.88 precipitation 0.1 14400 > th dose dependent rect. 18 7
66 33.90 radiation 30.0 30 < th dose independent rect. 5 9
67 33.91 precipitation 0.1 14400 < th dose independent rect. 16 1
72 33.91 precipitation 0.1 14400 < th dose dependent rect. 16 1
78 33.93 precipitation 0.1 14400 > th dose dependent rect. 16 1
81 33.94 precipitation 0.1 14400 > th dose independent rect. 16 1
94 33.96 humidity 90.0 720 > th dose dependent rect. 19 1
95 33.96 atmosphere 1010.0 270 < th dose dependent rect. 11 1
98 33.98 radiation 1.0 720 > th dose independent rect. 12 19
111 34.02 atmosphere 1015.0 30 < th dose dependent rect. 11 18
119 34.04 humidity 90.0 1440 > th dose independent rect. 18 2
131 34.07 humidity 90.0 1440 < th dose independent rect. 18 2
132 34.07 precipitation 0.1 14400 < th dose independent rect. 16 8
133 34.07 precipitation 0.1 14400 > th dose independent rect. 11 9
134 34.07 precipitation 0.1 14400 > th dose independent rect. 16 9
135 34.07 precipitation 0.1 14400 < th dose independent rect. 11 9
140 34.07 precipitation 0.1 14400 < th dose dependent rect. 16 8
141 34.07 precipitation 0.1 14400 < th dose dependent rect. 11 9
143 34.07 radiation 10.0 720 < th dose dependent rect. 16 11
144 34.07 radiation 1.0 720 < th dose dependent rect. 24 19
174 34.09 atmosphere 995.0 720 > th dose dependent rect. 5 4
184 34.10 atmosphere 1010.0 10 < th dose dependent rect. 11 5
186 34.11 precipitation 0.1 14400 > th dose independent sin 16 NA
188 34.11 precipitation 0.1 14400 < th dose independent sin 16 NA
191 34.11 precipitation 0.1 14400 < th dose dependent sin 16 NA
194 34.11 precipitation 0.1 14400 > th dose dependent rect. 16 14
195 34.11 radiation 1.0 720 < th dose dependent rect. 16 15
207 34.12 precipitation 0.1 14400 > th dose independent rect. 16 14
208 34.12 precipitation 0.1 14400 < th dose independent rect. 16 14
216 34.12 precipitation 0.1 14400 > th dose dependent rect. 16 8
221 34.12 precipitation 0.1 14400 < th dose dependent rect. 16 14
222 34.12 radiation 1.0 720 < th dose dependent rect. 24 21
225 34.13 radiation 30.0 10 < th dose independent rect. 5 7
257 34.13 precipitation 0.1 14400 > th dose dependent rect. 18 23
277 34.14 humidity 90.0 720 > th dose dependent rect. 15 6
280 34.14 humidity 90.0 720 > th dose dependent rect. 12 9
293 34.15 radiation 30.0 30 < th dose independent rect. 5 13
310 34.15 precipitation 0.1 14400 > th dose independent rect. 13 17
313 34.15 radiation 30.0 30 < th dose independent rect. 5 19
314 34.15 precipitation 0.1 14400 > th dose dependent sin 14 NA
321 34.15 radiation 1.0 720 < th dose dependent rect. 24 7
322 34.15 precipitation 0.1 14400 > th dose dependent rect. 10 7
336 34.15 precipitation 0.1 14400 > th dose dependent rect. 13 17
354 34.16 precipitation 0.1 14400 > th dose independent rect. 11 19
368 34.16 precipitation 0.1 14400 > th dose dependent rect. 18 12
447 34.19 precipitation 0.1 14400 > th dose independent rect. 18 7
448 34.19 precipitation 0.1 14400 < th dose independent rect. 10 7
475 34.19 humidity 90.0 1440 < th dose dependent rect. 18 2
481 34.19 precipitation 0.1 14400 < th dose dependent rect. 10 7
502 34.20 temperature 25.0 720 > th dose independent rect. 24 1
505 34.20 precipitation 0.1 14400 > th dose independent rect. 11 6
508 34.20 precipitation 0.1 14400 < th dose independent rect. 18 7
529 34.20 precipitation 0.1 14400 < th dose independent rect. 4 21
531 34.20 precipitation 0.1 14400 > th dose independent rect. 4 22
537 34.20 precipitation 0.1 14400 < th dose dependent rect. 18 7
541 34.20 precipitation 0.1 14400 > th dose dependent rect. 13 11
556 34.20 precipitation 0.1 14400 < th dose dependent rect. 4 21
561 34.21 humidity 70.0 1440 > th dose independent rect. 14 5
577 34.21 precipitation 0.1 14400 > th dose independent rect. 5 20
607 34.21 humidity 70.0 1440 > th dose dependent rect. 2 19
656 34.23 precipitation 0.1 720 > th dose independent rect. 19 7
693 34.23 radiation 40.0 10 < th dose dependent rect. 5 10
745 34.24 precipitation 0.1 14400 < th dose independent rect. 18 23
747 34.24 atmosphere 1010.0 10 < th dose dependent rect. 11 1
770 34.24 precipitation 0.1 14400 > th dose dependent rect. 18 20
778 34.24 precipitation 0.1 14400 < th dose dependent rect. 18 23
797 34.25 precipitation 0.1 14400 > th dose independent rect. 18 23
824 34.26 temperature 25.0 270 < th dose independent sin 7 NA
829 34.26 precipitation 0.1 4320 < th dose independent rect. 3 6
837 34.26 precipitation 0.1 14400 < th dose independent rect. 21 23
841 34.26 precipitation 0.1 4320 < th dose dependent rect. 3 6
858 34.26 precipitation 0.1 14400 > th dose dependent rect. 21 23
860 34.26 precipitation 0.1 14400 < th dose dependent rect. 21 23
867 34.27 humidity 90.0 1440 > th dose independent rect. 13 9
879 34.27 precipitation 0.1 14400 > th dose independent rect. 16 22
880 34.27 precipitation 0.1 14400 < th dose independent rect. 16 22
881 34.27 precipitation 0.1 14400 > th dose independent rect. 21 23
909 34.27 precipitation 0.1 14400 < th dose dependent rect. 16 22
934 34.28 precipitation 0.1 14400 > th dose independent rect. 13 23
938 34.28 precipitation 0.1 14400 < th dose independent rect. 13 23
967 34.28 precipitation 0.1 14400 > th dose dependent rect. 16 22
971 34.28 precipitation 0.1 14400 < th dose dependent rect. 13 23
974 34.29 precipitation 0.1 14400 > th dose independent no NA NA
975 34.29 precipitation 0.1 14400 < th dose independent no NA NA
978 34.29 precipitation 0.1 4320 > th dose independent rect. 3 6
980 34.29 humidity 70.0 1440 > th dose independent rect. 14 19
997 34.29 precipitation 0.1 14400 < th dose dependent no NA NA