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Os01g0110400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Acetyl-CoA C-acetyltransferase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0215) R2 : 0.51
β1 : -1.7 (0.0787) R2dD : 0.52 R2D : 0.441
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.318 (0.0459) R2dN8 : 0.069 R2N8 : -0.01
σ : 0.403
deviance : 74.44
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.83 0.366 10.5 -1.71 0.239 2.41 0.245 6.3 -0.327 1.28 19.43 4854 -- --
68.65 0.386 10.4 -1.56 0.248 0.358 0.198 -- -0.251 1.36 37.55 3182 -- --
60.87 0.363 10.5 -1.65 0.242 3.41 -- 8.52 -0.33 1.61 18.61 4884 -- --
63.78 0.372 10.4 -1.16 0.316 0.645 -- -- -0.0801 1.15 76.73 31389 -- --
64.34 0.374 10.5 -1.65 -- 3.42 -- 8.56 -0.328 -- 18.52 4853 -- --
70.98 0.395 10.4 -1.7 0.231 -- 0.195 -- -0.321 1.34 -- -- -- --
71.13 0.395 10.4 -1.71 0.232 -- -- -- -0.323 1.54 -- -- -- --
66.4 0.38 10.3 -0.931 -- 0.819 -- -- 0.008 -- 35.2 33363 -- --
67.98 0.384 10.2 -- 0.262 1.44 -- -- 0.298 1.48 56.22 47520 -- --
74.44 0.403 10.4 -1.7 -- -- -- -- -0.318 -- -- -- -- --
148.16 0.569 10.3 -- 0.202 -- -- -- -0.132 1.26 -- -- -- --
72.18 0.396 10.2 -- -- 1.42 -- -- 0.298 -- 49.07 47520 -- --
150.7 0.573 10.3 -- -- -- -- -- -0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.09 humidity 50 14400 > th dose dependent rect. 5 2
4 52.22 humidity 90 14400 < th dose dependent rect. 6 1
9 52.40 wind 9 43200 > th dose dependent rect. 14 2
12 52.82 wind 9 43200 > th dose independent rect. 11 4
15 52.91 wind 9 43200 > th dose dependent rect. 11 4
17 52.97 radiation 40 43200 < th dose dependent rect. 23 6
20 53.08 wind 9 43200 < th dose independent rect. 11 4
30 53.15 radiation 40 43200 < th dose dependent rect. 19 10
36 53.21 radiation 10 43200 < th dose dependent rect. 4 1
65 53.40 wind 9 43200 > th dose dependent rect. 11 1
72 53.44 humidity 80 43200 > th dose dependent rect. 23 1
75 53.48 wind 1 43200 < th dose dependent rect. 20 1
83 53.57 radiation 20 43200 > th dose dependent rect. 16 2
99 53.65 wind 9 43200 < th dose independent rect. 11 1
101 53.65 humidity 90 14400 < th dose independent rect. 4 3
102 53.68 humidity 50 43200 < th dose independent rect. 9 3
104 53.69 humidity 80 43200 > th dose dependent rect. 22 3
113 53.85 humidity 50 43200 > th dose independent rect. 10 1
136 53.93 humidity 50 43200 > th dose independent rect. 9 3
138 53.93 humidity 80 43200 > th dose dependent rect. 21 9
149 54.00 radiation 1 43200 < th dose independent rect. 23 6
151 54.00 radiation 40 43200 > th dose dependent rect. 14 18
155 54.02 radiation 40 14400 < th dose dependent rect. 18 7
163 54.05 humidity 50 43200 > th dose independent rect. 4 8
165 54.05 humidity 50 43200 > th dose independent rect. 24 12
195 54.08 radiation 1 43200 < th dose independent rect. 19 10
196 54.08 humidity 50 43200 > th dose independent rect. 18 18
197 54.08 radiation 40 14400 < th dose dependent rect. 18 2
199 54.09 radiation 1 43200 < th dose independent rect. 4 1
200 54.09 humidity 60 43200 < th dose dependent rect. 9 1
218 54.14 radiation 1 43200 < th dose dependent rect. 9 1
219 54.14 radiation 1 43200 > th dose dependent rect. 18 11
226 54.16 radiation 1 43200 > th dose independent rect. 4 1
237 54.16 radiation 1 43200 > th dose dependent rect. 4 1
282 54.25 radiation 1 43200 < th dose independent rect. 9 2
287 54.28 radiation 1 43200 > th dose independent rect. 9 2
292 54.29 radiation 1 43200 < th dose dependent rect. 7 4
296 54.30 radiation 1 43200 > th dose dependent rect. 18 1
322 54.38 humidity 60 43200 < th dose independent rect. 8 1
326 54.39 humidity 50 43200 < th dose independent rect. 18 18
331 54.43 humidity 50 43200 < th dose dependent rect. 11 1
355 54.53 wind 1 43200 > th dose independent rect. 20 1
376 54.65 wind 1 43200 < th dose independent rect. 20 1
383 54.69 wind 1 43200 < th dose independent rect. 22 1
393 54.75 radiation 40 43200 < th dose independent rect. 23 9
417 54.81 radiation 40 43200 < th dose independent rect. 4 4
420 54.81 radiation 40 43200 < th dose independent rect. 19 13
421 54.81 humidity 80 43200 > th dose dependent sin 11 NA
427 54.84 wind 1 43200 > th dose independent rect. 22 1
439 54.87 radiation 40 43200 < th dose independent rect. 7 1
448 54.88 temperature 15 43200 > th dose independent rect. 2 1
464 54.90 temperature 15 43200 < th dose independent rect. 2 1
496 54.95 humidity 70 14400 < th dose dependent rect. 20 12
497 54.96 humidity 90 14400 < th dose dependent rect. 22 10
513 55.03 temperature 15 43200 > th dose independent rect. 24 5
521 55.04 radiation 10 43200 < th dose independent rect. 18 7
523 55.05 radiation 10 43200 < th dose independent rect. 18 2
531 55.06 humidity 90 14400 > th dose independent rect. 5 2
536 55.06 humidity 70 14400 < th dose independent rect. 20 12
537 55.06 humidity 80 43200 > th dose independent rect. 23 20
551 55.08 humidity 60 43200 < th dose dependent rect. 18 18
569 55.11 wind 7 4320 > th dose independent rect. 17 1
608 55.16 humidity 60 43200 < th dose dependent rect. 19 16
616 55.18 temperature 15 43200 < th dose independent rect. 24 5
625 55.19 humidity 50 43200 > th dose independent sin 9 NA
713 55.27 temperature 15 43200 > th dose independent rect. 23 11
729 55.29 wind 1 43200 < th dose independent rect. 15 1
774 55.34 temperature 15 43200 > th dose independent rect. 9 1
801 55.38 temperature 15 43200 > th dose independent sin 8 NA
823 55.39 temperature 20 43200 < th dose dependent rect. 11 1
830 55.40 humidity 70 43200 > th dose dependent rect. 12 18
838 55.41 humidity 80 43200 < th dose independent rect. 23 19
863 55.43 wind 1 43200 > th dose independent rect. 13 4
885 55.47 temperature 20 43200 > th dose independent rect. 14 1
891 55.48 temperature 20 43200 < th dose independent rect. 14 1
907 55.50 humidity 70 43200 > th dose dependent rect. 22 18
920 55.52 wind 1 43200 < th dose independent rect. 5 14
942 55.55 radiation 40 43200 > th dose independent rect. 15 17
974 55.57 temperature 15 43200 < th dose independent rect. 9 1
994 55.59 temperature 15 43200 < th dose independent rect. 23 13