BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0110400 Os01g0110400|AK103194
(416 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase 788 0.0
Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase 599 e-171
Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ket... 205 6e-53
Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment) 197 1e-50
>Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase
Length = 416
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/416 (94%), Positives = 393/416 (94%)
Query: 1 MAPPPHSDSDLLKPRDVCIVGVARTPIGAXXXXXXXXPATKLGSVAIQAALRRANVEPAL 60
MAPPPHSDSDLLKPRDVCIVGVARTPIGA PATKLGSVAIQAALRRANVEPAL
Sbjct: 1 MAPPPHSDSDLLKPRDVCIVGVARTPIGALLGSLSSLPATKLGSVAIQAALRRANVEPAL 60
Query: 61 VQEVFMGNVLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMH 120
VQEVFMGNVLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMH
Sbjct: 61 VQEVFMGNVLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMH 120
Query: 121 DVVVAGGMESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQ 180
DVVVAGGMESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQ
Sbjct: 121 DVVVAGGMESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQ 180
Query: 181 HSISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKFNSA 240
HSISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKFNSA
Sbjct: 181 HSISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKFNSA 240
Query: 241 KLRKLGPTFKKNGSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPE 300
KLRKLGPTFKKNGSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPE
Sbjct: 241 KLRKLGPTFKKNGSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPE 300
Query: 301 LFTTTPALAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSL 360
LFTTTPALAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSL
Sbjct: 301 LFTTTPALAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSL 360
Query: 361 GHPIGCSGARIIVTLLGILRHKNXXXXXXXXXXXXXXXSALVVELMQPSLFTRSSL 416
GHPIGCSGARIIVTLLGILRHKN SALVVELMQPSLFTRSSL
Sbjct: 361 GHPIGCSGARIIVTLLGILRHKNGKIGVAGVCNGGGGASALVVELMQPSLFTRSSL 416
>Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase
Length = 401
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/398 (72%), Positives = 339/398 (85%), Gaps = 1/398 (0%)
Query: 9 SDLLKPRDVCIVGVARTPIGAXXXXXXXXPATKLGSVAIQAALRRANVEPALVQEVFMGN 68
SD + RDVC+VGVARTP+G ATKLGS+AI+AAL+RANV+PALVQEVF GN
Sbjct: 3 SDNIGSRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGN 62
Query: 69 VLSANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGM 128
VLSANLGQAPARQAALGAG+P+TV C+ VNKVC+SGMKA M AAQ+I LG++D+VVAGGM
Sbjct: 63 VLSANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGM 122
Query: 129 ESMSNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQ 188
ESMSNAPKY+A AR+GSRFGHD L+DGMLKDGLWDVY DF MG CAELCAD H+++RE+Q
Sbjct: 123 ESMSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQ 182
Query: 189 DLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKFNSAKLRKLGPT 248
D YAIQSNER IAAR+SG F+WEI P+E+ GRGKPP++VDKDE L KF+ KL+KL P+
Sbjct: 183 DAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLRPS 242
Query: 249 FKKN-GSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPA 307
FK+N G+VTAGN+SSISDGAAA+VLVSGQKA+ LGLQVIARI+G+ADAAQAPELFTT+PA
Sbjct: 243 FKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTSPA 302
Query: 308 LAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCS 367
LAIPKA++NAGL++S++DYYEINEAFS VALANQKLLGIPS K+N+ GG VSLGHP+GCS
Sbjct: 303 LAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLGCS 362
Query: 368 GARIIVTLLGILRHKNXXXXXXXXXXXXXXXSALVVEL 405
GARI+VTLLG+LR K SALV+EL
Sbjct: 363 GARILVTLLGVLREKGGKIGVAGVCNGGGGASALVLEL 400
>Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b)
(EC 2.3.1.16) (Fragment)
Length = 461
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 203/375 (54%), Gaps = 20/375 (5%)
Query: 16 DVCIVGVARTPI-GAXXXXXXXXPATKLGSVAIQAALRRANVEPALVQEVFMGNVLSANL 74
DV IV RT I + PA L +A + + + P+ V ++ +G VL+
Sbjct: 50 DVVIVAAYRTAICKSKRGGFKDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPGS 109
Query: 75 GQA-PARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESMSN 133
+A R AA AG PDTVP TVN+ CSSG++AV A I+ G++D+ +A G+ESM+
Sbjct: 110 QRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESMT- 168
Query: 134 APKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQDLYAI 193
V R + V + +D L PMG+ +E A + I+R EQD A+
Sbjct: 169 ----VNQVRLDGQVNPKVELFSQARDCL------LPMGLTSENVAKRFGITRMEQDQAAV 218
Query: 194 QSNERAIAARDSGTFSWEIAPVEIS-----SGRGKPPLIVDKDESLAKFNS-AKLRKLGP 247
+S+ +A AA SG F EI PV +G K ++V D+ + S A L KL P
Sbjct: 219 ESHRKAAAAAASGKFKEEIVPVHTKIVDPKTGEEKE-IVVSADDGIRPGTSLAVLSKLKP 277
Query: 248 TFKKNGSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPA 307
F K+G+ TAGN+S +SDGA A++L+ A GL ++ R +A P + PA
Sbjct: 278 AFSKDGTTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVFRSFAAVGVDPAIMGVGPA 337
Query: 308 LAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCS 367
+AIP AV AGLQ +D +EINEAF+ + K LG+ K+N++GG ++LGHP+G +
Sbjct: 338 VAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPAKVNVNGGAMALGHPLGAT 397
Query: 368 GARIIVTLLGILRHK 382
GAR + TLL ++ +
Sbjct: 398 GARSVSTLLNEMKRR 412
>Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment)
Length = 448
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 201/379 (53%), Gaps = 28/379 (7%)
Query: 16 DVCIVGVARTPI-GAXXXXXXXXPATKLGSVAIQAALRRANVEPALVQEVFMGNVLSANL 74
DV +V RTPI A L +V ++A L + P + ++ +G VL
Sbjct: 48 DVVVVAAYRTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGS 107
Query: 75 GQA-PARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESMS- 132
+A R AA AG+P+ VP TVN+ CSSG++AV A I+ G +D+ + G+ESMS
Sbjct: 108 QRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSV 167
Query: 133 NAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYND----FPMGMCAELCADQHSISREEQ 188
NA + +G + + +V PMG+ +E A ++ ++R+EQ
Sbjct: 168 NAMGW----------------EGQVNPKVNEVQKAQDCLLPMGITSENVAHRYGVTRQEQ 211
Query: 189 DLYAIQSNERAIAARDSGTFSWEIAPV-----EISSGRGKPPLIVDKDESLAKFNSAKLR 243
D A +S+ RA AA +G F EI PV + +G K +I D ++ L
Sbjct: 212 DQAAAESHRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTASGLA 271
Query: 244 KLGPTFKKNGSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFT 303
KL P F+K+G+ TAGNSS +SDGA A++L+ A GL ++ R +A P +
Sbjct: 272 KLKPVFRKDGTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFAAVGVDPAVMG 331
Query: 304 TTPALAIPKAVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHP 363
PA+AIP AV +AGLQ ID +E+NEAF+ + LG+ K+N++GG ++LGHP
Sbjct: 332 VGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHP 391
Query: 364 IGCSGARIIVTLLGILRHK 382
+G +GAR + TLL ++ +
Sbjct: 392 LGATGARCVATLLNEMKRR 410
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,456,982
Number of extensions: 540114
Number of successful extensions: 1298
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1294
Number of HSP's successfully gapped: 5
Length of query: 416
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 313
Effective length of database: 11,657,759
Effective search space: 3648878567
Effective search space used: 3648878567
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)