Os02g0817700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 3-ketoacyl-CoA thiolase (Fragment).
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Os02g0817700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 3-ketoacyl-CoA thiolase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.76 | 0.321 | 12.2 | 0.0647 | 1.31 | 0.615 | 0.945 | 0.168 | 0.271 | 17.5 | 20.2 | 985 | -- | -- |
| 46.83 | 0.319 | 12.2 | 0.0407 | 1.31 | 0.589 | 0.929 | -- | 0.265 | 17.5 | 20.4 | 994 | -- | -- |
| 48.9 | 0.326 | 12.1 | 0.0589 | 1.33 | 0.614 | -- | 0.168 | 0.275 | 17.6 | 20.33 | 1006 | -- | -- |
| 48.94 | 0.326 | 12.2 | 0.0382 | 1.33 | 0.588 | -- | -- | 0.269 | 17.6 | 20.3 | 1006 | -- | -- |
| 131.67 | 0.534 | 12.1 | 0.125 | -- | 0.67 | -- | 0.477 | 0.211 | -- | 21.28 | 545 | -- | -- |
| 55.6 | 0.35 | 12.1 | 0.27 | 1.31 | -- | 0.995 | -- | 0.391 | 17.7 | -- | -- | -- | -- |
| 57.97 | 0.357 | 12.1 | 0.263 | 1.32 | -- | -- | -- | 0.395 | 17.8 | -- | -- | -- | -- |
| 86.09 | 0.432 | 12.2 | 0.00517 | -- | 0.972 | -- | -- | 0.184 | -- | 27 | 345 | -- | -- |
| 48.96 | 0.326 | 12.2 | -- | 1.33 | 0.607 | -- | -- | 0.263 | 17.6 | 20.4 | 1006 | -- | -- |
| 148.53 | 0.569 | 12.1 | 0.223 | -- | -- | -- | -- | 0.364 | -- | -- | -- | -- | -- |
| 59.79 | 0.362 | 12.1 | -- | 1.32 | -- | -- | -- | 0.366 | 17.8 | -- | -- | -- | -- |
| 84.67 | 0.429 | 12.1 | -- | -- | 1.06 | -- | -- | 0.19 | -- | 27.58 | 360 | -- | -- |
| 149.84 | 0.571 | 12.1 | -- | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 2 | 40.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 10 | 40.56 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 3 |
| 21 | 40.88 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 46 | 41.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 64 | 41.54 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 97 | 41.84 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 102 | 41.88 | temperature | 25 | 720 | < th | dose independent | rect. | 24 | 12 |
| 135 | 42.17 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 150 | 42.28 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 1 |
| 167 | 42.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 179 | 42.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 182 | 42.50 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 191 | 42.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 211 | 42.69 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 13 |
| 213 | 42.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 276 | 43.04 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 282 | 43.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 324 | 43.34 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 359 | 43.46 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 365 | 43.48 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 391 | 43.61 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 407 | 43.68 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 483 | 43.96 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 576 | 44.26 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 929 | 45.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 14 |