BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0817700 Os02g0817700|AK069768
(448 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment) 726 0.0
Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ket... 568 e-162
Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase 169 6e-42
Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase 150 1e-36
>Os02g0817700 Similar to 3-ketoacyl-CoA thiolase (Fragment)
Length = 448
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/448 (81%), Positives = 366/448 (81%)
Query: 1 MEKAIDRQRVLLXXXXXXXXXXXXXXXXXXXXXXXXXXYQRTSAYGXXXXXXXXYRTPIC 60
MEKAIDRQRVLL YQRTSAYG YRTPIC
Sbjct: 1 MEKAIDRQRVLLAHLLPSSSSDQSLLSASACAAGDSAAYQRTSAYGDDVVVVAAYRTPIC 60
Query: 61 KAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRAAAFYA 120
KAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRAAAFYA
Sbjct: 61 KAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRAAAFYA 120
Query: 121 GVPENVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMSVNAMGWEGQVNPKV 180
GVPENVPVRTVNRQCSSGLQ GFYDIGIGAGLESMSVNAMGWEGQVNPKV
Sbjct: 121 GVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSVNAMGWEGQVNPKV 180
Query: 181 NEVQKAQDCLLPMGITSENVAHRYGVTRQEQDQXXXXXXXXXXXXXXXGKFKDEIVPVPT 240
NEVQKAQDCLLPMGITSENVAHRYGVTRQEQDQ GKFKDEIVPVPT
Sbjct: 181 NEVQKAQDCLLPMGITSENVAHRYGVTRQEQDQAAAESHRRAAAATAAGKFKDEIVPVPT 240
Query: 241 KIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLL 300
KIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLL
Sbjct: 241 KIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLL 300
Query: 301 MRRDVAMKKGLPILGVFRSFXXXXXXXXXXXXXXXXXXXXXXKSAGLQIEDIDLFELNEA 360
MRRDVAMKKGLPILGVFRSF KSAGLQIEDIDLFELNEA
Sbjct: 301 MRRDVAMKKGLPILGVFRSFAAVGVDPAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEA 360
Query: 361 FASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVT 420
FASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVT
Sbjct: 361 FASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGVVT 420
Query: 421 MCIGSGMGAAAVFERGDSVDQFSNVRHH 448
MCIGSGMGAAAVFERGDSVDQFSNVRHH
Sbjct: 421 MCIGSGMGAAAVFERGDSVDQFSNVRHH 448
>Os10g0457600 Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b)
(EC 2.3.1.16) (Fragment)
Length = 461
Score = 568 bits (1464), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/448 (62%), Positives = 325/448 (72%), Gaps = 2/448 (0%)
Query: 1 MEKAIDRQRVLLXXXXXXXXXXXXXXXXXXXXXXX--XXXYQRTSAYGXXXXXXXXYRTP 58
MEKAI+RQRVLL Y R + + YRT
Sbjct: 1 MEKAINRQRVLLAHLEPAASPAAAAPAITASACAAGDSAAYHRGACFADDVVIVAAYRTA 60
Query: 59 ICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRAAAF 118
ICK+KRGGFKDT EDLL V KA++D TK+NP E+GDIVVGTVL PGSQRAIECR AAF
Sbjct: 61 ICKSKRGGFKDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPGSQRAIECRMAAF 120
Query: 119 YAGVPENVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMSVNAMGWEGQVNP 178
YAG P+ VP+ TVNRQCSSGLQ G YDIGI AGLESM+VN + +GQVNP
Sbjct: 121 YAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESMTVNQVRLDGQVNP 180
Query: 179 KVNEVQKAQDCLLPMGITSENVAHRYGVTRQEQDQXXXXXXXXXXXXXXXGKFKDEIVPV 238
KV +A+DCLLPMG+TSENVA R+G+TR EQDQ GKFK+EIVPV
Sbjct: 181 KVELFSQARDCLLPMGLTSENVAKRFGITRMEQDQAAVESHRKAAAAAASGKFKEEIVPV 240
Query: 239 PTKIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKDGTTTAGNSSQVSDGAGAV 298
TKIVDPKTGEEK++V+S DDGIRPGT+ + L+KLKP F KDGTTTAGN+SQVSDGAGAV
Sbjct: 241 HTKIVDPKTGEEKEIVVSADDGIRPGTSLAVLSKLKPAFSKDGTTTAGNASQVSDGAGAV 300
Query: 299 LLMRRDVAMKKGLPILGVFRSFXXXXXXXXXXXXXXXXXXXXXXKSAGLQIEDIDLFELN 358
LLMRRD+AM+KGLPI+GVFRSF K+AGLQI+D+DLFE+N
Sbjct: 301 LLMRRDIAMQKGLPIVGVFRSFAAVGVDPAIMGVGPAVAIPAAVKAAGLQIDDVDLFEIN 360
Query: 359 EAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCRFGV 418
EAFASQ+VYCC KLGLD +KVNVNGGA+ALGHPLGATGAR V+TLLNEMKRRG+DCRFGV
Sbjct: 361 EAFASQYVYCCKKLGLDPAKVNVNGGAMALGHPLGATGARSVSTLLNEMKRRGKDCRFGV 420
Query: 419 VTMCIGSGMGAAAVFERGDSVDQFSNVR 446
++MCIGSGMGAAAVFERGD+VD+ +N R
Sbjct: 421 ISMCIGSGMGAAAVFERGDAVDELTNAR 448
>Os01g0110400 Similar to Acetyl-CoA C-acetyltransferase
Length = 416
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 184/394 (46%), Gaps = 28/394 (7%)
Query: 56 RTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRA 115
RTPI A G L +V ++A L + P + ++ +G VL +A R
Sbjct: 24 RTPI-GALLGSLSSLPATKLGSVAIQAALRRANVEPALVQEVFMGNVLSANLGQA-PARQ 81
Query: 116 AAFYAGVPENVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMSVNAMGWEGQ 175
AA AG+P+ VP TVN+ CSSG++ G +D+ + G+ESMS NA +
Sbjct: 82 AALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESMS-NAPKY--- 137
Query: 176 VNPKVNEVQKAQDCLL---------------PMGITSENVAHRYGVTRQEQDQXXXXXXX 220
V + D L+ PMG+ +E A ++ ++R+EQD
Sbjct: 138 VAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQDLYAIQSNE 197
Query: 221 XXXXXXXXGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFRKD 280
G F EI PV + +G K +I D ++ L KL P F+K+
Sbjct: 198 RAIAARDSGTFSWEIAPV-----EISSGRGKPPLIVDKDESLAKFNSAKLRKLGPTFKKN 252
Query: 281 GTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFXXXXXXXXXXXXXXXXXXXX 340
G+ TAGNSS +SDGA A++L+ A GL ++ R +
Sbjct: 253 GSVTAGNSSSISDGAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPALAIPK 312
Query: 341 XXKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCV 400
+AGLQ ID +E+NEAF+ + LG+ K+N++GG ++LGHP+G +GAR +
Sbjct: 313 AVSNAGLQTSQIDYYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARII 372
Query: 401 ATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFE 434
TLL + R ++ + GV +C G G +A V E
Sbjct: 373 VTLLGIL--RHKNGKIGVAGVCNGGGGASALVVE 404
>Os09g0252100 Similar to Acetyl-CoA C-acetyltransferase
Length = 401
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 184/400 (46%), Gaps = 39/400 (9%)
Query: 56 RTPICKAKRGGFKDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTVLGPGSQRAIECRA 115
RTP+ G L ++ ++A L ++P + ++ G VL +A R
Sbjct: 18 RTPM-GGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVLSANLGQA-PARQ 75
Query: 116 AAFYAGVPENVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMSVNAMGWEGQ 175
AA AG+P V VN+ C+SG++ G DI + G+ESMS NA
Sbjct: 76 AALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGMESMS-NA------ 128
Query: 176 VNPK-VNEVQKA----QDCLL---------------PMGITSENVAHRYGVTRQEQDQXX 215
PK + E +K D L+ MG +E A + +TR++QD
Sbjct: 129 --PKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQDAYA 186
Query: 216 XXXXXXXXXXXXXGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKP 275
G F EIVP+ P + V++ D+G+ L KL+P
Sbjct: 187 IQSNERGIAARNSGAFAWEIVPIEV----PVGRGKPPVLVDKDEGLDKFDPVK-LKKLRP 241
Query: 276 VFRKDG-TTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFXXXXXXXXXXXXXX 334
F+++G T TAGN+S +SDGA A++L+ A + GL ++ + F
Sbjct: 242 SFKENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTSP 301
Query: 335 XXXXXXXXKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGA 394
+AGL+ +D +E+NEAF++ + LG+ K+NV+GGA++LGHPLG
Sbjct: 302 ALAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLGC 361
Query: 395 TGARCVATLLNEMKRRGRDCRFGVVTMCIGSGMGAAAVFE 434
+GAR + TLL ++ +G + GV +C G G +A V E
Sbjct: 362 SGARILVTLLGVLREKGG--KIGVAGVCNGGGGASALVLE 399
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,264,339
Number of extensions: 471155
Number of successful extensions: 1043
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1035
Number of HSP's successfully gapped: 4
Length of query: 448
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 344
Effective length of database: 11,605,545
Effective search space: 3992307480
Effective search space used: 3992307480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)