BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0135700 Os09g0135700|AK121831
         (222 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0135700  Putative tyrosine phosphatase family protein        402   e-112
Os06g0208700  Putative tyrosine phosphatase family protein        265   2e-71
Os02g0771400  Putative tyrosine phosphatase family protein        251   2e-67
Os12g0420300  Putative tyrosine phosphatase family protein        110   8e-25

>Os09g0135700 Putative tyrosine phosphatase family protein
          Length = 222

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/222 (90%), Positives = 200/222 (90%)

Query: 1   MRQEATCSLVLTQDAQHRKNQPPLAEEXXXXXXXXXAMPPPCSILLRQXXXXXXXXXXXX 60
           MRQEATCSLVLTQDAQHRKNQPPLAEE         AMPPPCSILLRQ            
Sbjct: 1   MRQEATCSLVLTQDAQHRKNQPPLAEEDDDRDHTDDAMPPPCSILLRQEEGEATAAAAGE 60

Query: 61  XLLVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLCPEPYPEANQEFLRAHGIR 120
            LLVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLCPEPYPEANQEFLRAHGIR
Sbjct: 61  GLLVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLCPEPYPEANQEFLRAHGIR 120

Query: 121 LFQFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHCKRGKHRTGCVVGCLRKLQRW 180
           LFQFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHCKRGKHRTGCVVGCLRKLQRW
Sbjct: 121 LFQFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHCKRGKHRTGCVVGCLRKLQRW 180

Query: 181 CLTSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPASFSC 222
           CLTSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPASFSC
Sbjct: 181 CLTSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPASFSC 222



>Os06g0208700 Putative tyrosine phosphatase family protein
          Length = 226

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 122/157 (77%), Positives = 139/157 (88%)

Query: 63  LVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLCPEPYPEANQEFLRAHGIRLF 122
           LVPPLNFAMVD G++RSGFP  +N  F++SL LRS++ LCPEPYPE N EFL  +GI+L 
Sbjct: 68  LVPPLNFAMVDDGIFRSGFPAAANFRFLKSLNLRSIVYLCPEPYPETNAEFLAKNGIKLH 127

Query: 123 QFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHCKRGKHRTGCVVGCLRKLQRWCL 182
           QFGI+G KEPFVNIP+D+IREALKVVLDV N P+LIHCKRGKHRTGCVVGCLRKLQ+WCL
Sbjct: 128 QFGIEGRKEPFVNIPDDKIREALKVVLDVKNQPLLIHCKRGKHRTGCVVGCLRKLQKWCL 187

Query: 183 TSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPAS 219
           +S+FDEYQRFAAAKAR +D RFMELFDISSLKHL AS
Sbjct: 188 SSVFDEYQRFAAAKARSTDQRFMELFDISSLKHLTAS 224



>Os02g0771400 Putative tyrosine phosphatase family protein
          Length = 204

 Score =  251 bits (642), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 133/158 (84%)

Query: 62  LLVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLCPEPYPEANQEFLRAHGIRL 121
           +LVPPLNFA V+ G++RSGFP   N  F+ SL+LRS++ LCPEPYPE N  FL  +GI+L
Sbjct: 45  VLVPPLNFAEVNDGIFRSGFPAADNFAFLLSLKLRSIVYLCPEPYPEENTRFLEQNGIKL 104

Query: 122 FQFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHCKRGKHRTGCVVGCLRKLQRWC 181
            QFGIDGSKE  VNIPE++IREALKV+LDV N PVLIHCKRGKHRTGCVVGCLRKLQ+WC
Sbjct: 105 HQFGIDGSKELLVNIPEEKIREALKVILDVRNQPVLIHCKRGKHRTGCVVGCLRKLQKWC 164

Query: 182 LTSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPAS 219
           LTS+FDEYQ FAAAKAR +D RFMELFD SSL HL AS
Sbjct: 165 LTSVFDEYQHFAAAKARSTDQRFMELFDTSSLMHLTAS 202



>Os12g0420300 Putative tyrosine phosphatase family protein
          Length = 93

 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 57/64 (89%)

Query: 150 DVANHPVLIHCKRGKHRTGCVVGCLRKLQRWCLTSIFDEYQRFAAAKARVSDLRFMELFD 209
           DV NHPVLIHCKRGKHRTGC+VGC RKLQ WCL+S+F+EY R+AA K+R+SDL+F+E FD
Sbjct: 4   DVRNHPVLIHCKRGKHRTGCLVGCFRKLQNWCLSSVFEEYHRYAAGKSRLSDLKFIESFD 63

Query: 210 ISSL 213
           ++ +
Sbjct: 64  VNCM 67



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.141    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,386,224
Number of extensions: 274363
Number of successful extensions: 613
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 613
Number of HSP's successfully gapped: 4
Length of query: 222
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 125
Effective length of database: 11,971,043
Effective search space: 1496380375
Effective search space used: 1496380375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 154 (63.9 bits)