Os12g0420300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Putative tyrosine phosphatase family protein.
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Os12g0420300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Putative tyrosine phosphatase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.16 | 0.498 | 7.02 | -0.428 | 0.775 | -1.1 | -0.987 | -1.2 | -0.251 | 19.7 | 998.5 | 13770 | -- | -- |
| 114.22 | 0.498 | 7.03 | -0.564 | 0.737 | -1.14 | -1.07 | -- | -0.28 | 19.6 | 998 | 13270 | -- | -- |
| 114.9 | 0.499 | 7.02 | -0.408 | 0.773 | -1.1 | -- | -1.19 | -0.252 | 19.7 | 998.2 | 13781 | -- | -- |
| 116.56 | 0.503 | 7.04 | -0.626 | 0.778 | -1.2 | -- | -- | -0.285 | 19.8 | 997.3 | 13232 | -- | -- |
| 147.19 | 0.565 | 7 | -0.399 | -- | -1.1 | -- | -1.26 | -0.259 | -- | 998.6 | 13650 | -- | -- |
| 141.14 | 0.557 | 7.03 | -0.369 | 0.78 | -- | -0.937 | -- | -0.234 | 19.6 | -- | -- | -- | -- |
| 143.6 | 0.561 | 7.03 | -0.347 | 0.778 | -- | -- | -- | -0.236 | 19.7 | -- | -- | -- | -- |
| 149.15 | 0.569 | 7.02 | -0.64 | -- | -1.2 | -- | -- | -0.302 | -- | 997.4 | 13479 | -- | -- |
| 126.14 | 0.523 | 7.02 | -- | 0.783 | -1.01 | -- | -- | -0.209 | 19.7 | 996.4 | 13152 | -- | -- |
| 176.31 | 0.62 | 7.01 | -0.356 | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
| 146.77 | 0.567 | 7.02 | -- | 0.781 | -- | -- | -- | -0.197 | 19.7 | -- | -- | -- | -- |
| 159.14 | 0.588 | 7.01 | -- | -- | -1.01 | -- | -- | -0.223 | -- | 996.6 | 13350 | -- | -- |
| 179.66 | 0.626 | 7 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.69 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 4 | 111.40 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 7 | 111.50 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 16 | 111.57 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 155 | 112.39 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 19 | 17 |
| 204 | 112.48 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 206 | 112.49 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 4 | NA |
| 275 | 112.57 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 4 | NA |
| 345 | 112.63 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 502 | 112.71 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 5 | 15 |
| 547 | 112.73 | atmosphere | 995 | 14400 | > th | dose dependent | no | NA | NA |
| 691 | 112.79 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 785 | 112.82 | atmosphere | 1015 | 14400 | < th | dose dependent | no | NA | NA |
| 847 | 112.84 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 944 | 112.90 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 2 | 1 |