BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0564100 Os08g0564100|AK063258
(592 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0564100 Similar to ATP-binding cassette, sub-family F,... 1108 0.0
Os09g0572400 Similar to Abcf2-prov protein 1008 0.0
Os03g0441500 ABC transporter related domain containing protein 409 e-114
Os04g0658400 306 4e-83
Os11g0603200 Similar to ABCF-type protein 224 1e-58
>Os08g0564100 Similar to ATP-binding cassette, sub-family F, member 2 (Iron
inhibited ABC transporter 2) (HUSSY-18)
Length = 592
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/552 (97%), Positives = 538/552 (97%)
Query: 41 NGIAALKLSDRTCTGVLASHPLSRDIHIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXX 100
NGIAALKLSDRTCTGVLASHPLSRDIHIESLSLTFHGHDLIVDSELE
Sbjct: 41 NGIAALKLSDRTCTGVLASHPLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLN 100
Query: 101 XCGKSTLLTAIGCRELPIPEHMDIYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILS 160
CGKSTLLTAIGCRELPIPEHMDIYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILS
Sbjct: 101 GCGKSTLLTAIGCRELPIPEHMDIYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILS 160
Query: 161 AQDDGGGDALDRIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIAL 220
AQDDGGGDALDRIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIAL
Sbjct: 161 AQDDGGGDALDRIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIAL 220
Query: 221 ARALFMNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQ 280
ARALFMNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQ
Sbjct: 221 ARALFMNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQ 280
Query: 281 SKKLKLYSGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK 340
SKKLKLYSGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK
Sbjct: 281 SKKLKLYSGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK 340
Query: 341 EKTLAKMERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGV 400
EKTLAKMERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGV
Sbjct: 341 EKTLAKMERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGV 400
Query: 401 DLDSRIALVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPAL 460
DLDSRIALVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPAL
Sbjct: 401 DLDSRIALVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPAL 460
Query: 461 QYMMREYPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLD 520
QYMMREYPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLD
Sbjct: 461 QYMMREYPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLD 520
Query: 521 EPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMDF 580
EPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMDF
Sbjct: 521 EPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMDF 580
Query: 581 KEHLRSRAGLSD 592
KEHLRSRAGLSD
Sbjct: 581 KEHLRSRAGLSD 592
>Os09g0572400 Similar to Abcf2-prov protein
Length = 575
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/547 (88%), Positives = 517/547 (94%)
Query: 46 LKLSDRTCTGVLASHPLSRDIHIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKS 105
+ LS+RTCT VL SHPLSRDIHIESLSLTFHGHDL++D++LE CGKS
Sbjct: 29 ITLSERTCTAVLTSHPLSRDIHIESLSLTFHGHDLLLDTDLELNYGRRYGLLGLNGCGKS 88
Query: 106 TLLTAIGCRELPIPEHMDIYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILSAQDDG 165
LL AIGCRELPIP HMDIYHL+ EIEASDMSALQAVI CDE+R++LEKEAEIL+AQDDG
Sbjct: 89 CLLKAIGCRELPIPPHMDIYHLTHEIEASDMSALQAVISCDEQRLQLEKEAEILAAQDDG 148
Query: 166 GGDALDRIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIALARALF 225
GG+ALDR+YERLEA+DASTAEKRAAEILFGLGFNK MQAKKT DFSGGWRMRIALARALF
Sbjct: 149 GGEALDRVYERLEAIDASTAEKRAAEILFGLGFNKHMQAKKTCDFSGGWRMRIALARALF 208
Query: 226 MNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQSKKLK 285
MNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQ++KLK
Sbjct: 209 MNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNRKLK 268
Query: 286 LYSGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLA 345
LY+GNYDQYVQTR+ELEENQMKQY+WEQ+QIASMKEYIARFGHGSAKLARQAQSKEKTLA
Sbjct: 269 LYTGNYDQYVQTRAELEENQMKQYRWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLA 328
Query: 346 KMERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGVDLDSR 405
KMERGGLTEKVVRDKVL FRFTDVG LPPPVLQFVEV+FGYTPDNLIYKNLDFGVDLDSR
Sbjct: 329 KMERGGLTEKVVRDKVLTFRFTDVGTLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSR 388
Query: 406 IALVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPALQYMMR 465
+ALVGPNGAGKSTLLKLMTGDL PLDGMVRRHNHLRIAQ+HQHLAEKLDLDM ALQYMM+
Sbjct: 389 VALVGPNGAGKSTLLKLMTGDLIPLDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMMK 448
Query: 466 EYPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNH 525
EYPGNEEE+MRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLA+R+P +LLLDEPTNH
Sbjct: 449 EYPGNEEERMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAWREPHMLLLDEPTNH 508
Query: 526 LDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMDFKEHLR 585
LDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIM+FKEHLR
Sbjct: 509 LDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMEFKEHLR 568
Query: 586 SRAGLSD 592
S+AG+ D
Sbjct: 569 SKAGVDD 575
>Os03g0441500 ABC transporter related domain containing protein
Length = 710
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/548 (42%), Positives = 333/548 (60%), Gaps = 30/548 (5%)
Query: 64 RDIHIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPEHMD 123
+DI +E+ S++ G +L+ ++ L GKSTLL + R++P+P +D
Sbjct: 156 KDIVLENFSVSARGKELLKNASLRISHGRRYGLVGPNGMGKSTLLKLLSWRQVPVPRSID 215
Query: 124 IYHLSSEIEASDMSALQAVICCDEERMKLEKEAEILSAQDDGG-GDALDRIYERLEALDA 182
+ + EI + SAL+AV+ DEE L E L A +D + L +YE+L D+
Sbjct: 216 VLLVEQEIIGDNRSALEAVVAADEELAALRAEQAKLEASNDADDNERLAEVYEKLNLRDS 275
Query: 183 STAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIALARALFMNPTILLLDEPTNHLDL 242
A RA++IL GLGF++ MQA+ T+ FSGGWRMRI+LARALFM PT+LLLDEPTNHLDL
Sbjct: 276 DAARARASKILAGLGFDQAMQARSTKSFSGGWRMRISLARALFMQPTLLLLDEPTNHLDL 335
Query: 243 EACVWLEETL-KKFDRILVVISHSQDFLNGVCTNIIHMQSKKLKLYSGNYDQ----YVQT 297
A +WLE+ L ++ + L+V+SH +DFLN VC IIH+ K L +Y GN+D Y Q
Sbjct: 336 RAVLWLEQYLCSQWKKTLIVVSHDRDFLNTVCNEIIHLHDKNLHVYRGNFDDFESGYEQK 395
Query: 298 RSELE------ENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAK----M 347
R E+ E QMK K + A K + K A +++ K K +A M
Sbjct: 396 RKEMNRKFEVFEKQMKAAKKTGSKAAQDKVKGQALSKAN-KEAAKSKGKGKNVANDDDDM 454
Query: 348 ERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYK--NLDFGVDLDSR 405
+ L +K + KV F F + L PP+LQ +EV F Y P+ +K +D G+D+ +R
Sbjct: 455 KPADLPQKWLDYKV-EFHFPEPTLLTPPLLQLIEVGFSY-PNRPDFKLSGVDVGIDMGTR 512
Query: 406 IALVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPALQYMMR 465
+A+VGPNGAGKSTLL L+ GDL P G VRR LRI +Y QH + L ++ A+QY++R
Sbjct: 513 VAIVGPNGAGKSTLLNLLAGDLTPTKGEVRRSQKLRIGRYSQHFVDLLTMEENAVQYLLR 572
Query: 466 EYPGNE----EEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDE 521
+P E E +RA +GKFGL G + P+ LS GQ++RV+F ++ P +LLLDE
Sbjct: 573 LHPDQEGMSKAEAVRAKLGKFGLPGHNHLTPIVKLSGGQKARVVFTSISMSHPHILLLDE 632
Query: 522 PTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVA-----QEIWVCEKQAVTRWEGD 576
PTNHLD+++ID+LA+AL+E+ GG+VLVSHD RLI++V EIWV E V +++G
Sbjct: 633 PTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEQRSEIWVVEDGTVNKFDGT 692
Query: 577 IMDFKEHL 584
D+K+ L
Sbjct: 693 FEDYKDEL 700
>Os04g0658400
Length = 606
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 289/541 (53%), Gaps = 52/541 (9%)
Query: 64 RDIHIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPEHMD 123
RD+ +E + G L + L GK+TLL + R+LP+P +
Sbjct: 87 RDVVVEDSDVWVQGVALFEGASLRVAHGRRYGLVGPNGKGKTTLLKLLHWRKLPVPRGIR 146
Query: 124 IYHLSSEIEASD-MSALQAVICCDEERMKLEKEA---EILSAQDDGGGDALDRIYERLEA 179
+ + E + D ++ V+ DEE L E E SA G L +YE L
Sbjct: 147 VTLVVQEDDNRDPRPVIEVVLAADEELATLRAERDQLEASSAAAAANGARLAEVYEELTQ 206
Query: 180 LDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIALARALFMNPTILLLDEPTNH 239
TA RAA+IL GLGF++ QA+ FSGGW RIALA ALFM PT+LLLDEPTNH
Sbjct: 207 RGWDTAPARAAKILAGLGFDQASQARPASSFSGGWIKRIALAGALFMQPTLLLLDEPTNH 266
Query: 240 LDLEACVWLEETLK-KFDRILVVISHSQDFLNGVCTNIIHMQSKKLKLYSGNYDQYVQTR 298
LDL A +WLEE L + LVV+SH + FLN +C ++H+Q KKL Y G +D +V +
Sbjct: 267 LDLRAVLWLEEYLTAQCKSTLVVVSHEEGFLNAICDEVVHLQDKKLHAYRGGFDSFVGS- 325
Query: 299 SELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVR 358
+EQ++ +MKE S +LA+ A+ + G K
Sbjct: 326 ------------YEQKKAKAMKE--------SERLAKAAR---------KSGRRAPKKWH 356
Query: 359 DKVLVFRFTDVGKLP--PPVLQFVEVSFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGK 416
D + F F +L P+L+ E G+T +D V + R+A+VGPNGAGK
Sbjct: 357 DYTVEFHFAAPTELAGGGPLLRLAEA--GFTRGGFQLSAIDADVSMGQRVAVVGPNGAGK 414
Query: 417 STLLKLMTGDLAPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPALQY------MMREYP-- 468
STLLKL+ G+L P G RR+ LRI Y QH + L + +Q+ + +P
Sbjct: 415 STLLKLLAGELTPTSGEARRNPKLRIGLYSQHFCDALPEEKSPVQHGQCHRECLDTHPHL 474
Query: 469 GNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDI 528
++ + RA + +FGL+ ++ + + LS GQ++RV A +A +P +LLLDEPTN+LD+
Sbjct: 475 KSKPWEARAKLARFGLAKESHLTTIGKLSGGQKARVALASVALGEPHVLLLDEPTNNLDM 534
Query: 529 ETIDSLAEALNEWDGGLVLVSHDFRLINQVAQE-----IWVCEKQAVTRWEGDIMDFKEH 583
+ ID+LA+AL+E+ GG+V+VSHD RL+++V + +WV + V ++G ++++
Sbjct: 535 QNIDALADALDEFAGGVVIVSHDSRLVSRVCDDEERSALWVVQDGTVRPYDGTFAEYRDD 594
Query: 584 L 584
L
Sbjct: 595 L 595
>Os11g0603200 Similar to ABCF-type protein
Length = 690
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 265/530 (50%), Gaps = 22/530 (4%)
Query: 66 IHIESLSLTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELP-------I 118
+ +E ++ ++ G ++ D E GK+T L I E P
Sbjct: 96 VRLEGIAKSYKGVTVLRDVSWEVQRGEKVGLVGVNGAGKTTQLRIIAGLEDPDAGAVVKA 155
Query: 119 PEHMDIYHLSSEIEASDMSALQAVICCD-----EERMKLEK-EAEILSAQDDGGG----- 167
++M I LS E E ++ E R +LEK +A + A +D
Sbjct: 156 KDNMRIAFLSQEFEVCASRTVREEFLAAFEEEMEVRSRLEKVQAALEGATEDMDLMGRLL 215
Query: 168 DALDRIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTQDFSGGWRMRIALARALFMN 227
D LD + R + +D E + +++ LGF + + FSGGW+MR++L + L +
Sbjct: 216 DELDLLQRRSQDVDLGMVEVKIQKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQD 275
Query: 228 PTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQSKKLKLY 287
P +LLLDEPTNH+DL+ WLE LK + +V+ISH + FL+ +CT I+ + K Y
Sbjct: 276 PDLLLLDEPTNHVDLDTIEWLESYLKTQEVPMVIISHDRAFLDQLCTKIVETEFGVSKTY 335
Query: 288 SGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKM 347
GNY +YV ++ E Q ++ +Q++I KE I R G G A +A S++K L K+
Sbjct: 336 KGNYSEYVLAKAIWVETQYAAWEKQQKEIEQTKELINRLGAGVN--AGRASSEQKKLEKL 393
Query: 348 ERGGLTEKVVRDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGVDLDSRIA 407
E+ GL EK + K L RF + G+ VL + FG+ + L + N + V+ +IA
Sbjct: 394 EKEGLIEKPFQRKQLKIRFPERGQSGRTVLTIRNLEFGFGEEKL-FNNANLIVERGEKIA 452
Query: 408 LVGPNGAGKSTLLKLMTGDLAPLDGMVRRHNHLRIAQY-HQHLAEKLDLDMPALQYMMRE 466
++GPNG GKSTLLKL+ G G V H + Y Q+ AE LDL+ L +
Sbjct: 453 IIGPNGCGKSTLLKLILGMEKTQGGEVLLGEHNVLPNYFEQNQAEALDLEKTVLDTVAEA 512
Query: 467 YPGNEEEKMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHL 526
+ + ++ +G+ ++ LS G+++R+ F LL+LDEPTNHL
Sbjct: 513 AEDWKIDDIKGLLGRCNFRDDMLDRKVQFLSGGEKARLAFCKFLVTPSTLLILDEPTNHL 572
Query: 527 DIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCEKQAVTRWEGD 576
DI + + L EA++E+ G ++ VSHD + Q+ + + Q + ++GD
Sbjct: 573 DIPSKEMLEEAISEYTGTVITVSHDRYFVKQIVNRVIEVKDQTIQDYQGD 622
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%)
Query: 198 FNKQMQAKKTQDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEETLKKFDR 257
F M +K Q SGG + R+A + L T+L+LDEPTNHLD+ + LEE + ++
Sbjct: 530 FRDDMLDRKVQFLSGGEKARLAFCKFLVTPSTLLILDEPTNHLDIPSKEMLEEAISEYTG 589
Query: 258 ILVVISHSQDFLNGVCTNIIHMQSKKLKLYSGNYDQYVQ 296
++ +SH + F+ + +I ++ + ++ Y G+Y+ Y++
Sbjct: 590 TVITVSHDRYFVKQIVNRVIEVKDQTIQDYQGDYNYYLE 628
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,980,943
Number of extensions: 723865
Number of successful extensions: 2605
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2590
Number of HSP's successfully gapped: 6
Length of query: 592
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 486
Effective length of database: 11,501,117
Effective search space: 5589542862
Effective search space used: 5589542862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)