Os11g0603200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABCF-type protein.
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Os11g0603200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABCF-type protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.58 | 0.427 | 14.2 | 0.301 | 2.35 | 1.04 | 0.589 | 1.01 | -0.123 | 7.08 | 20 | 1410 | -- | -- |
| 84.38 | 0.428 | 14.2 | 0.452 | 2.32 | 0.902 | 0.655 | -- | -0.0721 | 7.03 | 20.11 | 1435 | -- | -- |
| 83.45 | 0.425 | 14.2 | 0.322 | 2.35 | 1.07 | -- | 1.01 | -0.122 | 7.07 | 19.86 | 1410 | -- | -- |
| 84.89 | 0.429 | 14.2 | 0.459 | 2.35 | 0.875 | -- | -- | -0.087 | 7.07 | 20.3 | 1425 | -- | -- |
| 346.29 | 0.867 | 14.3 | 0.412 | -- | 1.21 | -- | 1.02 | -0.109 | -- | 27.55 | 2012 | -- | -- |
| 98.42 | 0.465 | 14.3 | 0.0953 | 2.34 | -- | 0.701 | -- | -0.268 | 7.14 | -- | -- | -- | -- |
| 99.71 | 0.468 | 14.3 | 0.109 | 2.34 | -- | -- | -- | -0.269 | 7.12 | -- | -- | -- | -- |
| 210.8 | 0.676 | 14.2 | 0.659 | -- | 1.78 | -- | -- | 0.198 | -- | 26.4 | 503 | -- | -- |
| 89.21 | 0.44 | 14.2 | -- | 2.36 | 0.629 | -- | -- | -0.161 | 7.07 | 20.66 | 1394 | -- | -- |
| 389.19 | 0.922 | 14.3 | 0.154 | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
| 100.03 | 0.468 | 14.3 | -- | 2.34 | -- | -- | -- | -0.281 | 7.12 | -- | -- | -- | -- |
| 221.78 | 0.694 | 14.2 | -- | -- | 1.69 | -- | -- | 0.147 | -- | 26.36 | 496 | -- | -- |
| 389.81 | 0.922 | 14.3 | -- | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 2 | 76.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 4 | 77.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 5 | 77.59 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 6 | 77.70 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 9 | 77.91 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 10 | 6 |
| 12 | 78.02 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 14 | 78.02 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 15 | 78.02 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 6 |
| 16 | 78.02 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 17 | 78.02 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 6 |
| 18 | 78.08 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 20 | 78.10 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 22 | 78.21 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 29 | 78.33 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 32 | 78.37 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 35 | 78.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 18 |
| 36 | 78.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 37 | 78.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 41 | 78.57 | wind | 1.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 42 | 78.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 45 | 78.69 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 46 | 78.74 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 48 | 78.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 49 | 78.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 50 | 78.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 51 | 78.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 53 | 78.84 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 4 |
| 54 | 78.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 6 |
| 55 | 78.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 56 | 78.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 59 | 78.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 60 | 79.01 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 62 | 79.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 66 | 79.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 70 | 79.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 71 | 79.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 72 | 79.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 73 | 79.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 74 | 79.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 76 | 79.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 4 |
| 77 | 79.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 80 | 79.17 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 81 | 79.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 82 | 79.23 | radiation | 1.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 84 | 79.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 87 | 79.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 91 | 79.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 99 | 79.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 101 | 79.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 18 |
| 103 | 79.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 104 | 79.62 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 105 | 79.68 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 106 | 79.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 172 | 80.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 184 | 80.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 195 | 80.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 217 | 80.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 18 |
| 218 | 80.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 222 | 80.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 235 | 80.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 247 | 80.80 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 263 | 80.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 267 | 80.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 279 | 80.99 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 280 | 80.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 281 | 81.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 297 | 81.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 299 | 81.06 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 302 | 81.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 308 | 81.09 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 324 | 81.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 18 |
| 334 | 81.21 | humidity | 60.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 341 | 81.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 16 |
| 344 | 81.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 350 | 81.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 20 |
| 351 | 81.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 353 | 81.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 360 | 81.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 385 | 81.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 390 | 81.36 | temperature | 20.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 392 | 81.36 | temperature | 20.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 401 | 81.39 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 407 | 81.39 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 437 | 81.48 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 443 | 81.50 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 460 | 81.54 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 462 | 81.54 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 15 |
| 471 | 81.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 472 | 81.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 473 | 81.56 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 474 | 81.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 475 | 81.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 476 | 81.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 482 | 81.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 484 | 81.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 516 | 81.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 18 |
| 522 | 81.64 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 539 | 81.68 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 545 | 81.69 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 573 | 81.74 | wind | 9.0 | 30 | < th | dose dependent | rect. | 10 | 6 |
| 580 | 81.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 583 | 81.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 585 | 81.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 591 | 81.76 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 594 | 81.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 621 | 81.79 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 15 |
| 622 | 81.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 9 |
| 626 | 81.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 633 | 81.81 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 635 | 81.81 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 637 | 81.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 642 | 81.82 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 648 | 81.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 670 | 81.87 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 691 | 81.90 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 696 | 81.92 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 715 | 81.95 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 721 | 81.96 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 722 | 81.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 6 |
| 745 | 82.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 749 | 82.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 750 | 82.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 790 | 82.06 | temperature | 25.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 802 | 82.08 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 839 | 82.14 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 8 |
| 871 | 82.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 8 |
| 872 | 82.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 879 | 82.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 890 | 82.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 910 | 82.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 16 |
| 916 | 82.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 16 |
| 945 | 82.27 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |