Os08g0564100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ATP-binding cassette, sub-family F, member 2 (Iron inhibited ABC transporter 2) (HUSSY-18).
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Os08g0564100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ATP-binding cassette, sub-family F, member 2 (Iron inhibited ABC transporter 2) (HUSSY-18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.37 | 0.313 | 13.6 | -0.353 | 0.373 | 0.99 | 0.105 | 0.359 | -0.0853 | 1.79 | 20.38 | 1560 | -- | -- |
| 44.36 | 0.31 | 13.6 | -0.396 | 0.369 | 0.911 | 0.139 | -- | -0.103 | 1.82 | 20.6 | 1568 | -- | -- |
| 44.2 | 0.31 | 13.6 | -0.343 | 0.375 | 0.945 | -- | 0.336 | -0.0921 | 1.91 | 20.61 | 1562 | -- | -- |
| 44.41 | 0.31 | 13.6 | -0.396 | 0.377 | 0.9 | -- | -- | -0.102 | 1.86 | 20.62 | 1568 | -- | -- |
| 51.56 | 0.334 | 13.6 | -0.315 | -- | 0.932 | -- | 0.381 | -0.0941 | -- | 20.7 | 1295 | -- | -- |
| 62.55 | 0.371 | 13.5 | -0.0307 | 0.382 | -- | 0.106 | -- | 0.105 | 1.82 | -- | -- | -- | -- |
| 62.58 | 0.37 | 13.5 | -0.0342 | 0.383 | -- | -- | -- | 0.104 | 1.93 | -- | -- | -- | -- |
| 51.85 | 0.335 | 13.6 | -0.391 | -- | 0.883 | -- | -- | -0.105 | -- | 20.82 | 1302 | -- | -- |
| 48.02 | 0.323 | 13.6 | -- | 0.369 | 0.739 | -- | -- | -0.0367 | 1.94 | 20.8 | 1535 | -- | -- |
| 71.42 | 0.395 | 13.5 | -0.0184 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 62.62 | 0.37 | 13.5 | -- | 0.382 | -- | -- | -- | 0.108 | 1.93 | -- | -- | -- | -- |
| 54.85 | 0.345 | 13.6 | -- | -- | 0.621 | -- | -- | -0.0581 | -- | 22.1 | 1161 | -- | -- |
| 71.43 | 0.394 | 13.5 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.57 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 4 | 43.25 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 6 | 43.35 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 37 | 44.03 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 42 | 44.11 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 9 |
| 48 | 44.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 51 | 44.24 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 10 |
| 53 | 44.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 70 | 44.32 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 79 | 44.36 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 80 | 44.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 96 | 44.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 98 | 44.44 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 21 |
| 108 | 44.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 110 | 44.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 113 | 44.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 126 | 44.49 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 133 | 44.50 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 154 | 44.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 176 | 44.56 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 10 |
| 205 | 44.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 15 |
| 216 | 44.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 237 | 44.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 16 |
| 303 | 44.72 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 18 |
| 395 | 44.83 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 445 | 44.89 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 493 | 44.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 498 | 44.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 518 | 45.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 526 | 45.04 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 532 | 45.05 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 543 | 45.06 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 23 |
| 571 | 45.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 586 | 45.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 611 | 45.16 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 17 |
| 626 | 45.20 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 647 | 45.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 663 | 45.26 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 676 | 45.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 682 | 45.30 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 697 | 45.33 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 23 |
| 738 | 45.40 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 740 | 45.40 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 785 | 45.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 789 | 45.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 802 | 45.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 814 | 45.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 816 | 45.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 825 | 45.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 827 | 45.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 993 | 45.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |