BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0129600 Os08g0129600|AK102166
(798 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0129600 Conserved hypothetical protein 1535 0.0
Os11g0105750 Quinonprotein alcohol dehydrogenase-like domai... 330 2e-90
AK062121 328 1e-89
Os05g0573900 Conserved hypothetical protein 177 3e-44
Os03g0294100 Conserved hypothetical protein 139 8e-33
Os12g0105375 Conserved hypothetical protein 132 9e-31
Os01g0652000 Conserved hypothetical protein 75 3e-13
Os05g0185800 Conserved hypothetical protein 71 3e-12
>Os08g0129600 Conserved hypothetical protein
Length = 798
Score = 1535 bits (3973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/798 (93%), Positives = 750/798 (93%)
Query: 1 MKEDIMFDNQTKPCRSRVDSKSNINVLKPKFGSSWGSQIVKGFXXXXXXXXXXXXXXXXP 60
MKEDIMFDNQTKPCRSRVDSKSNINVLKPKFGSSWGSQIVKGF P
Sbjct: 1 MKEDIMFDNQTKPCRSRVDSKSNINVLKPKFGSSWGSQIVKGFTADKKTKKTAAAASKKP 60
Query: 61 PLASVENVNTSNQQIPYHSRVKRSLMGDFPCSPAGAQVHPHVFDCHGIRSPASHDLFLEL 120
PLASVENVNTSNQQIPYHSRVKRSLMGDFPCSPAGAQVHPHVFDCHGIRSPASHDLFLEL
Sbjct: 61 PLASVENVNTSNQQIPYHSRVKRSLMGDFPCSPAGAQVHPHVFDCHGIRSPASHDLFLEL 120
Query: 121 DHLREQLRESKERELALQSELRQCRENPRVSELEKDLDSRKNEIDRLVRLKTSLEVEKTS 180
DHLREQLRESKERELALQSELRQCRENPRVSELEKDLDSRKNEIDRLVRLKTSLEVEKTS
Sbjct: 121 DHLREQLRESKERELALQSELRQCRENPRVSELEKDLDSRKNEIDRLVRLKTSLEVEKTS 180
Query: 181 LSEQLSALSCMVEQHEENARLDGHGNRVSSMNGGNASSSENLEIEVVELRRLNKELQFQK 240
LSEQLSALSCMVEQHEENARLDGHGNRVSSMNGGNASSSENLEIEVVELRRLNKELQFQK
Sbjct: 181 LSEQLSALSCMVEQHEENARLDGHGNRVSSMNGGNASSSENLEIEVVELRRLNKELQFQK 240
Query: 241 RNLAIKLSSAESKLAVIEKNAESEIVAKVQAEASLLRHTNANLSKQVEGLQMSRLTEVEE 300
RNLAIKLSSAESKLAVIEKNAESEIVAKVQAEASLLRHTNANLSKQVEGLQMSRLTEVEE
Sbjct: 241 RNLAIKLSSAESKLAVIEKNAESEIVAKVQAEASLLRHTNANLSKQVEGLQMSRLTEVEE 300
Query: 301 LAYLRWINSCLRHELSNSDQAARAMTDADYNDEIACHVDDCDGDARLDQNSSDHKKFSIA 360
LAYLRWINSCLRHELSNSDQAARAMTDADYNDEIACHVDDCDGDARLDQNSSDHKKFSIA
Sbjct: 301 LAYLRWINSCLRHELSNSDQAARAMTDADYNDEIACHVDDCDGDARLDQNSSDHKKFSIA 360
Query: 361 ERIKQWSQNDKNCEASKKEALLDRAWIEAAECRSPTRRHSLGGPKGCAQEFSIVKRRQSD 420
ERIKQWSQNDKNCEASKKEALLDRAWIEAAECRSPTRRHSLGGPKGCAQEFSIVKRRQSD
Sbjct: 361 ERIKQWSQNDKNCEASKKEALLDRAWIEAAECRSPTRRHSLGGPKGCAQEFSIVKRRQSD 420
Query: 421 TFICLPEATDEAISCNKDETIREKRELLVDKYDFGRSESSRFLLGKSEVCKSQSMDVEKR 480
TFICLPEATDEAISCNKDETIREKRELLVDKYDFGRSESSRFLLGKSEVCKSQSMDVEKR
Sbjct: 421 TFICLPEATDEAISCNKDETIREKRELLVDKYDFGRSESSRFLLGKSEVCKSQSMDVEKR 480
Query: 481 ALRIXXXXXXXXXXXXXXXXXXXXAANXXXXXXXXXXXXFSTRNAGVMKRAPQVAELYHS 540
ALRI AAN FSTRNAGVMKRAPQVAELYHS
Sbjct: 481 ALRIPNPPPRPSVSVPHSGPSNGSAANPPKPPPPPPPPKFSTRNAGVMKRAPQVAELYHS 540
Query: 541 LMRRDSKKDTSGSGICETANSANVRSSMIGEIENRSSHLQAIKADVETQGEFVKSLIKEV 600
LMRRDSKKDTSGSGICETANSANVRSSMIGEIENRSSHLQAIKADVETQGEFVKSLIKEV
Sbjct: 541 LMRRDSKKDTSGSGICETANSANVRSSMIGEIENRSSHLQAIKADVETQGEFVKSLIKEV 600
Query: 601 TNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKADTLREAAFGYQDLKKLES 660
TNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKADTLREAAFGYQDLKKLES
Sbjct: 601 TNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKADTLREAAFGYQDLKKLES 660
Query: 661 EVSNYKDDPRLPCDIALKKMVTISEKTERSVYNLLRTRDATMRQCKEFNIPTDWMLDNNL 720
EVSNYKDDPRLPCDIALKKMVTISEKTERSVYNLLRTRDATMRQCKEFNIPTDWMLDNNL
Sbjct: 661 EVSNYKDDPRLPCDIALKKMVTISEKTERSVYNLLRTRDATMRQCKEFNIPTDWMLDNNL 720
Query: 721 IGKIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPET 780
IGKIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPET
Sbjct: 721 IGKIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPET 780
Query: 781 MDAFEELRNLVHVRNSTQ 798
MDAFEELRNLVHVRNSTQ
Sbjct: 781 MDAFEELRNLVHVRNSTQ 798
>Os11g0105750 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 918
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/260 (61%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 530 RAPQVAELYHSLMRRDSKKDTSGSGICETANSANVRSSMIGEIENRSSHLQAIKADVETQ 589
RAP+V E Y SLM+R++KKDT+ T+++ +VRS+MIGEIENRS+ L A+KADVETQ
Sbjct: 658 RAPEVVEFYQSLMKREAKKDTTSL-GSTTSSAFDVRSNMIGEIENRSTFLLAVKADVETQ 716
Query: 590 GEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKADTLREAA 649
G+FV+SL EV A++ +I+DVVAFV WLD+EL FLVDERAVLKHFDWPE K D LREAA
Sbjct: 717 GDFVESLANEVRAASFVNIDDVVAFVNWLDEELSFLVDERAVLKHFDWPESKTDALREAA 776
Query: 650 FGYQDLKKLESEVSNYKDDPRLPCDIALKKMVTISEKTERSVYNLLRTRDATMRQCKEFN 709
F YQDL KLE +VS++ DDP+L C+ ALKKM ++ EK E+SVY LLRTRD + + +E+
Sbjct: 777 FEYQDLLKLEHKVSSFTDDPKLACEEALKKMYSLLEKVEQSVYALLRTRDMAISRYREYG 836
Query: 710 IPTDWMLDNNLIGKIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRM 769
+P DW+ + ++GKIK +SV+LAK YMKRVA EL + K+P E++LLQ VRFAFR+
Sbjct: 837 LPVDWLSGSGVVGKIKLASVQLAKKYMKRVATELDALQGTEKEPNREFLLLQGVRFAFRV 896
Query: 770 HQFAGGFDPETMDAFEELRN 789
HQFAGGFD E+M AFEELR+
Sbjct: 897 HQFAGGFDEESMKAFEELRS 916
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 42/235 (17%)
Query: 119 ELDHLREQLRESKERELALQSELRQC----RENPRVSELEKDLDSRKNEIDRLVRLKTSL 174
EL+ LR +RE +ERE+ L+ EL + + V EL + L + EID L SL
Sbjct: 104 ELERLRGLVRELEEREVKLEGELLEYYGLKEQETDVVELHRQLKIKMVEIDMLKMTINSL 163
Query: 175 EVEKTSLSE----------QLSALSCMVEQHEENARLDGH---------GNRVSSMNGGN 215
+ E+ L + +L A +++ + +++ + N+V ++
Sbjct: 164 QEERKKLQDDVARGTGAKRELEAARNKIKELQRQIQMEANQTKGQLMLLKNQVIALKSKE 223
Query: 216 ASSS-------------ENLEIEVVELRRLNKELQFQKRNLAIKLSSAESKLAVIEKNAE 262
++ + LE+EVVELRR NKEL ++KR+L +KL +A+ K+ E
Sbjct: 224 EEAAIKDAEVQRKLKKLKELEVEVVELRRKNKELLYEKRDLIVKLDAAQGKIT------E 277
Query: 263 SEIVAKVQAEASLLRHTNANLSKQVEGLQMSRLTEVEELAYLRWINSCLRHELSN 317
S++V+ + E + LRH N +L+KQVEGLQM+R +EVEEL YLRW+N+CLR+EL N
Sbjct: 278 SDVVSHAREEINKLRHVNEDLTKQVEGLQMNRFSEVEELVYLRWVNACLRYELRN 332
>AK062121
Length = 430
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/260 (61%), Positives = 203/260 (78%), Gaps = 1/260 (0%)
Query: 530 RAPQVAELYHSLMRRDSKKDTSGSGICETANSANVRSSMIGEIENRSSHLQAIKADVETQ 589
RAP+V E Y SLM+R++KKDT+ T++ ++VRS+MIGEIENRS+ L A+K DVETQ
Sbjct: 159 RAPEVVEFYQSLMKREAKKDTTSL-GSTTSSVSDVRSNMIGEIENRSTFLLAVKVDVETQ 217
Query: 590 GEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKADTLREAA 649
G+FV+SL EV A++ +I+DVVAFV WLD+EL FLVDERAVLKHFDWPE K D LREAA
Sbjct: 218 GDFVESLANEVRAASFVNIDDVVAFVNWLDEELSFLVDERAVLKHFDWPESKTDALREAA 277
Query: 650 FGYQDLKKLESEVSNYKDDPRLPCDIALKKMVTISEKTERSVYNLLRTRDATMRQCKEFN 709
F YQDL KLE +VS++ DDP+L C+ ALKKM ++ E E+SVY LLRTRD + + +E+
Sbjct: 278 FEYQDLLKLEHKVSSFTDDPKLACEEALKKMYSLLETVEQSVYALLRTRDMAISRYREYG 337
Query: 710 IPTDWMLDNNLIGKIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRM 769
IP DW+ D+ ++GKIK +SV+LAK YM RVA EL + K+P E++LLQ VRFAFR+
Sbjct: 338 IPVDWLSDSGVVGKIKLASVQLAKKYMNRVATELDALQGTEKEPNREFLLLQGVRFAFRV 397
Query: 770 HQFAGGFDPETMDAFEELRN 789
HQFAGGFD E+M AFEELR+
Sbjct: 398 HQFAGGFDEESMKAFEELRS 417
>Os05g0573900 Conserved hypothetical protein
Length = 131
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 99/119 (83%)
Query: 568 MIGEIENRSSHLQAIKADVETQGEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDELGFLVD 627
MIGEIENRS+HL AIK+DVE QG+F++ LIKEV AA+ DIEDVV FVKWLD EL LVD
Sbjct: 13 MIGEIENRSAHLLAIKSDVERQGDFIRFLIKEVEGAAFVDIEDVVTFVKWLDVELSRLVD 72
Query: 628 ERAVLKHFDWPERKADTLREAAFGYQDLKKLESEVSNYKDDPRLPCDIALKKMVTISEK 686
ERAVLKHF+WPE+KAD LREAAFGY+DLKK+E E S++ DDPR PC ALKKM + EK
Sbjct: 73 ERAVLKHFEWPEQKADALREAAFGYRDLKKIEEEASSFCDDPRQPCSSALKKMQALFEK 131
>Os03g0294100 Conserved hypothetical protein
Length = 112
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 579 LQAIKADVETQGEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHF-DW 637
LQ IK+DVE Q EF+ L EV NAAYK+I DV FVKWLD EL +LVDERAVLKHF +W
Sbjct: 4 LQQIKSDVENQSEFINFLAVEVKNAAYKEIADVEEFVKWLDGELSYLVDERAVLKHFPNW 63
Query: 638 PERKADTLREAAFGYQDLKKLESEVSNYKDDPRLPCDIALKKMVTISEK 686
PE+KADT+REAAF Y+DLK LESE S++ DD R+ +ALK+M + +K
Sbjct: 64 PEKKADTMREAAFTYRDLKNLESEASSFHDDRRVATPMALKRMQALQDK 112
>Os12g0105375 Conserved hypothetical protein
Length = 152
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%)
Query: 686 KTERSVYNLLRTRDATMRQCKEFNIPTDWMLDNNLIGKIKFSSVKLAKMYMKRVAMELQY 745
+ E+SVY LLRTRD + + +E+ IP DW+ D+ ++GKIK +SV+LAK YM RVA EL
Sbjct: 36 RVEQSVYALLRTRDMAISRYREYGIPVDWLSDSGVVGKIKLASVQLAKKYMNRVATELDA 95
Query: 746 MGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPETMDAFEELRN 789
+ K+P E++LLQ VRFAFR+HQFAGGFD E+M AFEELR+
Sbjct: 96 LQGTEKEPNREFLLLQGVRFAFRVHQFAGGFDEESMKAFEELRS 139
>Os01g0652000 Conserved hypothetical protein
Length = 97
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 723 KIKFSSVKLAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPETMD 782
+IK SVKLA Y+KRV+ EL+ + P E ++LQ VRFAFR+HQFAGGFD +TM
Sbjct: 8 QIKLQSVKLAMKYLKRVSSELE---AIKGGPDEEELMLQGVRFAFRVHQFAGGFDVDTMR 64
Query: 783 AFEELR 788
AF+EL+
Sbjct: 65 AFQELK 70
>Os05g0185800 Conserved hypothetical protein
Length = 617
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 127/273 (46%), Gaps = 56/273 (20%)
Query: 86 MGDFPCSPAGAQVHPHVFDCHGIRSPASHDLFLELDHLREQLRESKERELALQSELRQC- 144
MG+ SPA P V + ++P E+ LRE +R +ERE L+ +L +
Sbjct: 136 MGNIATSPA-----PRVSEEDATKTP-------EIFELREMVRSLQEREKTLELQLLESY 183
Query: 145 ---RENPRVSELEKDLDSRKNEID-RLVRLKT-SLEVEKTSLSEQLSALSCMVEQHE--- 196
++ V ELE L + N ++ +L LK SL+ E L QL+ S + + E
Sbjct: 184 GLQEQDVAVRELENQL--KINTVESKLYTLKIESLQSENERLQAQLTESSKLASELEAAR 241
Query: 197 -------ENARLDGH--GNRVSSM-------------NGGNASSS--------ENLEIEV 226
+ R D R++S+ G S+ E LE E
Sbjct: 242 MKCKLLKKKLRQDAEQAKERIASLQEMADSWQCKEIITEGKFSAEVEEKLSKLEELENEA 301
Query: 227 VELRRLNKELQFQKRNLAIKLSSAESKLAVIEKNAESEIVAKVQAEASLLRHTNANLSKQ 286
ELR +N LQ + +LA +L ++L + K + V +Q EA LR N L+K+
Sbjct: 302 RELRVVNSRLQQENAHLARRLEL--TRLPPVPKPINNMEVKALQ-EADHLRQENDKLAKE 358
Query: 287 VEGLQMSRLTEVEELAYLRWINSCLRHELSNSD 319
VE L+ R ++VEEL YL+WIN+CLR+EL N D
Sbjct: 359 VEQLKTDRFSDVEELVYLKWINACLRYELRNQD 391
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.129 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,023,087
Number of extensions: 889784
Number of successful extensions: 3274
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3265
Number of HSP's successfully gapped: 9
Length of query: 798
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 689
Effective length of database: 11,344,475
Effective search space: 7816343275
Effective search space used: 7816343275
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)