BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0111200 Os08g0111200|AK072300
(928 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0111200 Protein of unknown function DUF608 domain cont... 1665 0.0
Os11g0242100 Protein of unknown function DUF608 domain cont... 935 0.0
Os10g0473400 Protein of unknown function DUF608 domain cont... 763 0.0
>Os08g0111200 Protein of unknown function DUF608 domain containing protein
Length = 928
Score = 1665 bits (4311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/928 (88%), Positives = 820/928 (88%)
Query: 1 MGSSELEETKAVLHMDCEKPPAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLN 60
MGSSELEETKAVLHMDCEKPPAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLN
Sbjct: 1 MGSSELEETKAVLHMDCEKPPAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLN 60
Query: 61 LKDNAKGLASVYDPLKKWMDNCYRGVPLGGIGAGSIGRSYRGYFQQFQIFPSIYEEKPIL 120
LKDNAKGLASVYDPLKKWMDNCYRGVPLGGIGAGSIGRSYRGYFQQFQIFPSIYEEKPIL
Sbjct: 61 LKDNAKGLASVYDPLKKWMDNCYRGVPLGGIGAGSIGRSYRGYFQQFQIFPSIYEEKPIL 120
Query: 121 ANQFSAFISRPDGKRYSTVLSAPNADVLKGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTV 180
ANQFSAFISRPDGKRYSTVLSAPNADVLKGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTV
Sbjct: 121 ANQFSAFISRPDGKRYSTVLSAPNADVLKGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTV 180
Query: 181 YNGEPDPEIKITCRQISPFIPHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGG 240
YNGEPDPEIKITCRQISPFIPHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGG
Sbjct: 181 YNGEPDPEIKITCRQISPFIPHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGG 240
Query: 241 KSELTGNHKNSRMTTADGRPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAKDMWDQ 300
KSELTGNHKNSRMTTADGRPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAKDMWDQ
Sbjct: 241 KSELTGNHKNSRMTTADGRPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAKDMWDQ 300
Query: 301 INKNGXXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXSFALSWSCPEVKFPA 360
INKNG I SFALSWSCPEVKFPA
Sbjct: 301 INKNGSFVGDGNAAAAATGASRPGSSIGAAVAATTTVAAGGARAVSFALSWSCPEVKFPA 360
Query: 361 GRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWYPITLF 420
GRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWYPITLF
Sbjct: 361 GRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWYPITLF 420
Query: 421 NELYYLNAGGTIWTDGQPPKNTSLSSATEPFNLDTFSTVANGGSAVDGILXXXXXXXXXX 480
NELYYLNAGGTIWTDGQPPKNTSLSSATEPFNLDTFSTVANGGSAVDGIL
Sbjct: 421 NELYYLNAGGTIWTDGQPPKNTSLSSATEPFNLDTFSTVANGGSAVDGILSTVAVAAARS 480
Query: 481 XXXXXXXXXMGTALLRDGEENVGQVLYLEGMEYNMWNTYDVHFYXXXXXXXXXXXXXXXX 540
MGTALLRDGEENVGQVLYLEGMEYNMWNTYDVHFY
Sbjct: 481 NTAAAAAAAMGTALLRDGEENVGQVLYLEGMEYNMWNTYDVHFYASFALLSLFPELELNL 540
Query: 541 QRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLN 600
QRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLN
Sbjct: 541 QRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLN 600
Query: 601 PKFVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSV 660
PKFVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSV
Sbjct: 601 PKFVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSV 660
Query: 661 SGVSAYTXXXXXXXXXXXXXXXXXXXXXXXEAYFRGRYHRARRVYTDELWNGGYFNYDNS 720
SGVSAYT EAYFRGRYHRARRVYTDELWNGGYFNYDNS
Sbjct: 661 SGVSAYTGGLWVAALQAAAAMAGIVGDGAAEAYFRGRYHRARRVYTDELWNGGYFNYDNS 720
Query: 721 GGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMR 780
GGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMR
Sbjct: 721 GGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMR 780
Query: 781 PDGAVDASSTQSKEVWPGVTYAVAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTP 840
PDGAVDASSTQSKEVWPGVTYAVAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTP
Sbjct: 781 PDGAVDASSTQSKEVWPGVTYAVAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTP 840
Query: 841 ESWTADGGYRALHYMRPLGVWAMQWALSPPVLHKEHRVXXXXXXXXXXXLGQEKFDKVAS 900
ESWTADGGYRALHYMRPLGVWAMQWALSPPVLHKEHRV LGQEKFDKVAS
Sbjct: 841 ESWTADGGYRALHYMRPLGVWAMQWALSPPVLHKEHRVAAVAASPEDAALGQEKFDKVAS 900
Query: 901 MLRLPEEQQHKGILRALYDTLRQLLLPS 928
MLRLPEEQQHKGILRALYDTLRQLLLPS
Sbjct: 901 MLRLPEEQQHKGILRALYDTLRQLLLPS 928
>Os11g0242100 Protein of unknown function DUF608 domain containing protein
Length = 950
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/923 (52%), Positives = 601/923 (65%), Gaps = 31/923 (3%)
Query: 21 PAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLNLKDNAKGLASVYDPLKKWMD 80
P ++WE + G + F +T + + L +++ L++ +KG A+V DP+KK +
Sbjct: 33 PELTWEHKLSNIGYDLPSFRLTWRETFQLAGLGLRLGRHILEETSKGRAAVIDPMKKRIA 92
Query: 81 NCYRGVPLGGIGAGSIGRSYRGYFQQFQIFPSIYEEKPILANQFSAFISRPDGKRYSTVL 140
+GVPLGGIG+GSIGRSY+G FQ++Q+FP EE+P+LANQFSAFISR DG+ YS+VL
Sbjct: 93 KSGQGVPLGGIGSGSIGRSYKGEFQRWQLFPGTCEERPVLANQFSAFISRKDGRNYSSVL 152
Query: 141 SAPNADVLKGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTVYNGEPDPEIKITCRQISPFI 200
D+ KG + +GIGSWDW + +N TYH L+PRSWT+YNGEPDP++ I CRQISP I
Sbjct: 153 HPGKPDLPKGSNISGIGSWDWNMSGQNSTYHALYPRSWTIYNGEPDPDVNIVCRQISPII 212
Query: 201 PHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGGKSELTGNHKNSRMT------ 254
PHNY++SS+PV+VFTFT+ NSG+T ADVTLLFTWANSVGGKSELTG H NS M
Sbjct: 213 PHNYQQSSYPVSVFTFTVTNSGNTAADVTLLFTWANSVGGKSELTGYHSNSPMIEKDGVH 272
Query: 255 -------TADGRPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAKDMWDQINKNGXX 307
TA+G+PPVTFAIA++E + + ++ CP F + S S +AKDMW+ + +NG
Sbjct: 273 GILLHHRTANGQPPVTFAIAAQEKEDIHISECPYFIISGS-SDAFSAKDMWNYVKENGSF 331
Query: 308 XXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXSFALSWSCPEVKFPAGRTYHRR 367
I SFAL+W+CPEVKF +G+TYHRR
Sbjct: 332 DNLDLTKTSMCSKPGLS--IGAAIAASVKLPPQTTQNVSFALAWACPEVKFSSGKTYHRR 389
Query: 368 YTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWYPITLFNELYYLN 427
YTKFHGTD DAAA LAHDA+LEH WE QIEEWQ PILQD+ P+WYP+TLFNELYYLN
Sbjct: 390 YTKFHGTDNDAAAS-LAHDAILEHNSWERQIEEWQNPILQDERFPDWYPVTLFNELYYLN 448
Query: 428 AGGTIWTDGQPPKNTSLSSATEPFNLDTFSTVANGGSAV-------DGILXXXXXXXXXX 480
AGGTIWTDG PP + + F+LD + A+ + + IL
Sbjct: 449 AGGTIWTDGLPPIQSLTGIGEKKFSLDMQNGDADDANGIIPRNNTASDILNQMASVLERI 508
Query: 481 XXXXXXXXXMGTALLRDGEENVGQVLYLEGMEYNMWNTYDVHFYXXXXXXXXXXXXXXXX 540
+GT LL+ GEEN+GQ LYLEG+EY MWNTYDVHFY
Sbjct: 509 HASMESNSAIGTTLLQ-GEENIGQFLYLEGIEYYMWNTYDVHFYASFSLIMLFPKLQLSI 567
Query: 541 QRDFVRGVLLHDP-CLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDL 599
QRDF VL+HDP LR DG VARKVLGAVPHD+GL DPWF+VNAY L++ RWKDL
Sbjct: 568 QRDFAAAVLMHDPEKLRMLHDGKWVARKVLGAVPHDLGLYDPWFKVNAYTLYNTDRWKDL 627
Query: 600 NPKFVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWS 659
NPKFVLQVYRDVVATG+ FA A WP+VY+AMAYM+QFDRD DGM+ENE PDQTYD+WS
Sbjct: 628 NPKFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDRDKDGMIENEDFPDQTYDVWS 687
Query: 660 VSGVSAYTXXXXXXXXXXXXXXXXXXXXXXXEAYFRGRYHRARRVYTDELWNGGYFNYDN 719
++G+SAY E F +Y +A+ VY +LWNG YFNYD+
Sbjct: 688 MAGISAYCGGLWVAALQAASALAHEVGDKASEKLFWDKYEKAKSVY-GKLWNGSYFNYDD 746
Query: 720 SGGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGM 779
S+SI ADQLAGQWYA+ACGL PIVD DKA AL + +NVM+ K G GA+NGM
Sbjct: 747 GDNIMSASIHADQLAGQWYAKACGLFPIVDKDKAESALEKIYSFNVMKFKDGKRGAMNGM 806
Query: 780 RPDGAVDASSTQSKEVWPGVTYAVAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQT 839
PDG VD S+ QS+E+WPGVTYA+AA MI EGM E FKTA+GI+ A W G GY+FQT
Sbjct: 807 WPDGTVDMSAMQSREIWPGVTYALAATMIQEGMVEKGFKTAEGIYHAAWSPEGLGYSFQT 866
Query: 840 PESWTADGGYRALHYMRPLGVWAMQWALSPPVLHKEHRVXXXXXXXXXXXLGQEKFDKVA 899
PE+W D YR+L YMRPL +WA+QWALS P LHK+ Q + ++A
Sbjct: 867 PEAWNNDDEYRSLCYMRPLAIWAIQWALSNPKLHKQ----TADIPQDSFPKNQFSYARIA 922
Query: 900 SMLRLPEEQQHKGILRALYDTLR 922
+L LPE++ K LR +Y+ +R
Sbjct: 923 KLLHLPEDESPKSFLRVIYEIVR 945
>Os10g0473400 Protein of unknown function DUF608 domain containing protein
Length = 974
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/903 (44%), Positives = 525/903 (58%), Gaps = 48/903 (5%)
Query: 12 VLHMDCEKPPAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLNLKDNAKGLASV 71
+L D PP +W R + + FS+T + M ++ L +++ ++ + G +
Sbjct: 27 LLDFDGGSPPEQAWRRRLNSHANLLKEFSVTFMEAMRMMSLGLRLWSYVREEASHGRKAP 86
Query: 72 YDPL--KKWMDNCYRGVPLGGIGAGSIGRSYRGYFQQFQIFPSIYEEKPILANQFSAFIS 129
DP +K + +GVPLGG+G+GSI R +RG F+ + I P + E P++ NQFS F+S
Sbjct: 87 IDPFTKEKCKPSASQGVPLGGMGSGSISRGFRGEFKNWHIIPGLCETSPVMENQFSIFVS 146
Query: 130 RPDG-KRYSTVLSAPNADVLKGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTVYNGEPDPE 188
R G K+YS+VLS + + LK + +GI SWDW L ++ TYH LFPR+WTVY+GEPDP+
Sbjct: 147 RDGGNKKYSSVLSPGHHEGLKKCNDSGISSWDWNLSGQHSTYHALFPRAWTVYDGEPDPD 206
Query: 189 IKITCRQISPFIPHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGGKSELTGNH 248
+KI+CRQISPFIPH+YK+SS P +VF +TL N+G A V+LL TWANS+GG S +G H
Sbjct: 207 LKISCRQISPFIPHDYKDSSLPTSVFVYTLVNTGKDRAKVSLLMTWANSIGGFSHHSGGH 266
Query: 249 KNSRMTTADG-------------RPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAK 295
N DG PPVTFAIA+ ET V VT P F G S G +AK
Sbjct: 267 FNEPFIAEDGVSGVLLHHKTAKDNPPVTFAIAACETQNVNVTVLPVF--GLSGEGHDSAK 324
Query: 296 DMWDQINKNGXXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXSFALSWSCPE 355
MWD++ +NG + F L+WS P+
Sbjct: 325 QMWDRMKQNGHFDRENFEAGTSMPSSSGET-LCAAVSASTWVEPHGRCTVVFGLAWSSPK 383
Query: 356 VKFPAGRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWY 415
+KF G TY+RRYT+F+GT +A L HDAL ++ WE +IE+WQ PIL+++ LPEWY
Sbjct: 384 IKFQKGCTYNRRYTEFYGTSERSAVN-LVHDALTKYRIWEEEIEKWQNPILKNEKLPEWY 442
Query: 416 PITLFNELYYLNAGGTIWTDGQPP--------------------KNTSLSSATEPFNLDT 455
TLFNELY+L AGGT+WTDGQPP ++T S + T
Sbjct: 443 KFTLFNELYFLVAGGTVWTDGQPPVIDEKPSPGSNQQKSSKRGTRDTKQESVKDNHVKLT 502
Query: 456 FSTVANGGSAVDGILXXXXXXXXXXX-XXXXXXXXMGTA------LLRDGEENVGQVLYL 508
V NGG +G +G+ L ++G ENVG+ LYL
Sbjct: 503 AEQVTNGGDLANGEEQSVSKYAAVHGPQMAKATNGLGSQEPIPYLLSKNGPENVGKFLYL 562
Query: 509 EGMEYNMWNTYDVHFYXXXXXXXXXXXXXXXXQRDFVRGVLLHDPCLRRTL-DGATVARK 567
EG+EY MW TYDVHFY QRDF VL D + L DG + RK
Sbjct: 563 EGVEYIMWCTYDVHFYASFALLDLFPKIELSIQRDFANAVLYEDRRRMKFLADGTSGIRK 622
Query: 568 VLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLNPKFVLQVYRDVVATGNAGFAEAAWPAV 627
V GAVPHD+G +DPW E+NAY +HD +WKDLNPKFVLQVYRD ATG+ F WPAV
Sbjct: 623 VKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNPKFVLQVYRDFAATGDMSFGRDVWPAV 682
Query: 628 YLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSVSGVSAYTXXXXXXXXXXXXXXXXXXXX 687
M YM+QFDRDGDG++EN+G PDQTYD W+V G+SAY
Sbjct: 683 CAVMDYMNQFDRDGDGLIENDGFPDQTYDAWTVHGISAYCGGLWLAALQAAATMAHRLGD 742
Query: 688 XXXEAYFRGRYHRARRVYTDELWNGGYFNYDNSGGATSSSIQADQLAGQWYARACGLEPI 747
++ ++ +A+ VY +LWNG YFNYD+ + S SIQADQLAGQWYA + GL P+
Sbjct: 743 RPFAEKYKLKFIQAKAVYEAKLWNGSYFNYDSGTSSNSRSIQADQLAGQWYAASSGLPPL 802
Query: 748 VDGDKARRALATVLDYNVMRVKGGAIGAVNGMRPDGAVDASSTQSKEVWPGVTYAVAAAM 807
D +K R AL + ++NVM+VKGG +GAVNGM P+G VD + QS+E+W GVTY VAA M
Sbjct: 803 FDENKIRSALQKIFEFNVMKVKGGRLGAVNGMTPNGKVDETCMQSREIWTGVTYGVAANM 862
Query: 808 IHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTPESWTADGGYRALHYMRPLGVWAMQWAL 867
+ GM F TA+GI AGW + G+GY FQTPE WT DG YR+L YMRPL +WAMQWA
Sbjct: 863 LLHGMEHQGFTTAEGIFIAGWSEEGYGYWFQTPEGWTIDGHYRSLIYMRPLAIWAMQWAR 922
Query: 868 SPP 870
SPP
Sbjct: 923 SPP 925
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,285,299
Number of extensions: 1358980
Number of successful extensions: 2845
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2826
Number of HSP's successfully gapped: 6
Length of query: 928
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 818
Effective length of database: 11,292,261
Effective search space: 9237069498
Effective search space used: 9237069498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)