Os08g0111200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF608 domain containing protein.
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Os08g0111200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF608 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.56 | 0.614 | 10.8 | 0.239 | 1.49 | -1.54 | -0.502 | 1.26 | 0.292 | 15.4 | 82.39 | 1332 | -- | -- |
| 172.52 | 0.612 | 10.8 | 0.124 | 1.46 | -1.46 | -0.586 | -- | 0.269 | 15.4 | 82 | 1309 | -- | -- |
| 169.79 | 0.607 | 10.8 | 0.249 | 1.41 | -1.64 | -- | 1.81 | 0.283 | 15.8 | 83.62 | 1212 | -- | -- |
| 173.5 | 0.613 | 10.9 | 0.124 | 1.46 | -1.45 | -- | -- | 0.271 | 15.5 | 82.05 | 1290 | -- | -- |
| 271.15 | 0.767 | 10.8 | 0.307 | -- | -2.21 | -- | 2.54 | 0.313 | -- | 87 | 1179 | -- | -- |
| 221.27 | 0.697 | 10.8 | -0.104 | 1.65 | -- | -0.351 | -- | 0.312 | 15.3 | -- | -- | -- | -- |
| 221.66 | 0.697 | 10.8 | -0.111 | 1.65 | -- | -- | -- | 0.31 | 15.3 | -- | -- | -- | -- |
| 277.61 | 0.776 | 10.9 | 0.0769 | -- | -2.05 | -- | -- | 0.223 | -- | 86.99 | 1190 | -- | -- |
| 173.82 | 0.614 | 10.9 | -- | 1.46 | -1.44 | -- | -- | 0.263 | 15.5 | 82.86 | 1290 | -- | -- |
| 375.46 | 0.905 | 10.8 | -0.181 | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
| 221.98 | 0.697 | 10.8 | -- | 1.65 | -- | -- | -- | 0.322 | 15.3 | -- | -- | -- | -- |
| 277.55 | 0.776 | 10.8 | -- | -- | -2.05 | -- | -- | 0.261 | -- | 87.27 | 1187 | -- | -- |
| 376.32 | 0.905 | 10.8 | -- | -- | -- | -- | -- | 0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.46 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 5 | 163.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 17 | 166.25 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 19 | 166.47 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 25 | 166.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 20 |
| 41 | 168.23 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 56 | 169.82 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 60 | 169.90 | humidity | 60 | 30 | > th | dose dependent | rect. | 21 | 20 |
| 61 | 169.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 63 | 169.98 | humidity | 80 | 1440 | < th | dose dependent | sin | 4 | NA |
| 64 | 170.01 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 73 | 170.24 | humidity | 80 | 1440 | < th | dose dependent | rect. | 2 | 14 |
| 78 | 170.28 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 11 |
| 84 | 170.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 91 | 170.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 159 | 171.06 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 9 |
| 175 | 171.17 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 269 | 172.51 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 422 | 173.87 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 436 | 173.95 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 454 | 174.02 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 21 |
| 457 | 174.03 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 515 | 174.35 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 530 | 174.48 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 537 | 174.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 574 | 174.74 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 619 | 175.02 | humidity | 50 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 796 | 175.95 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 809 | 175.96 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 998 | 176.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |