Os11g0242100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF608 domain containing protein.
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Os11g0242100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF608 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.62 | 0.372 | 11.1 | -1.34 | 0.271 | 0.912 | 0.705 | -1.96 | -0.241 | 2.7 | 27.59 | 1224 | -- | -- |
| 64.53 | 0.374 | 11.1 | -0.942 | 0.285 | 0.696 | 0.699 | -- | -0.217 | 2.58 | 27.05 | 2526 | -- | -- |
| 64.16 | 0.373 | 11.1 | -1.31 | 0.282 | 0.912 | -- | -1.74 | -0.233 | 3.5 | 27.68 | 1211 | -- | -- |
| 64.36 | 0.374 | 11.1 | -0.933 | 0.289 | 0.752 | -- | -- | -0.165 | 3.74 | 27.77 | 1144 | -- | -- |
| 68.36 | 0.385 | 11.1 | -1.26 | -- | 0.943 | -- | -1.4 | -0.233 | -- | 27.32 | 1199 | -- | -- |
| 84.02 | 0.43 | 11.1 | -0.707 | 0.379 | -- | 0.851 | -- | -0.198 | 2.29 | -- | -- | -- | -- |
| 86.63 | 0.436 | 11.1 | -0.731 | 0.386 | -- | -- | -- | -0.203 | 2.64 | -- | -- | -- | -- |
| 68.62 | 0.386 | 11.1 | -0.924 | -- | 0.781 | -- | -- | -0.167 | -- | 27.61 | 1182 | -- | -- |
| 85.85 | 0.432 | 11.1 | -- | 0.296 | 0.567 | -- | -- | 0.00439 | 3.23 | 30 | 1137 | -- | -- |
| 95.32 | 0.456 | 11.1 | -0.715 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 100.73 | 0.469 | 11.1 | -- | 0.372 | -- | -- | -- | -0.122 | 2.62 | -- | -- | -- | -- |
| 90.51 | 0.443 | 11 | -- | -- | 0.607 | -- | -- | 0.0137 | -- | 30 | 1166 | -- | -- |
| 108.81 | 0.487 | 11.1 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.95 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 2 | 58.19 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 3 | 58.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 15 | 58.40 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 29 | 58.65 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 44 | 58.80 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 45 | 58.81 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 47 | 58.82 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 51 | 58.83 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 58 | 58.92 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 85 | 59.44 | radiation | 20 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 95 | 59.51 | radiation | 20 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 121 | 60.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 130 | 60.71 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 132 | 60.74 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 147 | 60.77 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 149 | 60.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 174 | 60.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 186 | 61.03 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 196 | 61.04 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 211 | 61.11 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 226 | 61.19 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 232 | 61.20 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 236 | 61.23 | radiation | 40 | 4320 | < th | dose dependent | rect. | 22 | 10 |
| 255 | 61.25 | radiation | 40 | 4320 | < th | dose dependent | rect. | 2 | 6 |
| 264 | 61.31 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 272 | 61.36 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 285 | 61.37 | radiation | 40 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 286 | 61.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 309 | 61.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 330 | 61.47 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 366 | 61.63 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 379 | 61.70 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 401 | 61.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 479 | 61.99 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 483 | 62.00 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 486 | 62.00 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 494 | 62.03 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 503 | 62.05 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 516 | 62.08 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 521 | 62.09 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 525 | 62.11 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 533 | 62.16 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 556 | 62.22 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 617 | 62.42 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 638 | 62.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 11 |
| 657 | 62.52 | wind | 1 | 43200 | > th | dose dependent | sin | 5 | NA |
| 664 | 62.54 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 666 | 62.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 683 | 62.57 | wind | 9 | 43200 | < th | dose dependent | sin | 5 | NA |
| 692 | 62.59 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 750 | 62.69 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 770 | 62.74 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 795 | 62.78 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 818 | 62.79 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 820 | 62.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 841 | 62.82 | humidity | 50 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 846 | 62.83 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 921 | 62.92 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 935 | 62.94 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 936 | 62.94 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 967 | 62.97 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 975 | 62.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 986 | 62.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 4 |