BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0656100 Os07g0656100|J075140O11
         (550 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0656100  Protein of unknown function DUF580 family protein  1001   0.0  
Os03g0651300  Protein of unknown function DUF580 family protein   115   7e-26
Os02g0580100  Protein of unknown function DUF580 family protein    94   2e-19

>Os07g0656100 Protein of unknown function DUF580 family protein
          Length = 550

 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/550 (91%), Positives = 503/550 (91%)

Query: 1   MGAADNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPVARLQAQRPLAPLQVT 60
           MGAADNAAA                                GAPVARLQAQRPLAPLQVT
Sbjct: 1   MGAADNAAAPPRGDVPERGRGGGEPEAKEREVKVVVVDEPPGAPVARLQAQRPLAPLQVT 60

Query: 61  TQAPPPPMSVASGGVEPPPQVATFQPVMQTPPQVAFASLNSRVYTNGITLCVFLVHLXXX 120
           TQAPPPPMSVASGGVEPPPQVATFQPVMQTPPQVAFASLNSRVYTNGITLCVFLVHL   
Sbjct: 61  TQAPPPPMSVASGGVEPPPQVATFQPVMQTPPQVAFASLNSRVYTNGITLCVFLVHLAAA 120

Query: 121 XXXXXXXXXXXXKDIVQHPRSRNAQRERSLLREWLPPVEGAVALSIVLAFAWQKAVRAWP 180
                       KDIVQHPRSRNAQRERSLLREWLPPVEGAVALSIVLAFAWQKAVRAWP
Sbjct: 121 TFAVGFFVFRAVKDIVQHPRSRNAQRERSLLREWLPPVEGAVALSIVLAFAWQKAVRAWP 180

Query: 181 RAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVAMVMFSIGTGLYACWVTRRVGFTAR 240
           RAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVAMVMFSIGTGLYACWVTRRVGFTAR
Sbjct: 181 RAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVAMVMFSIGTGLYACWVTRRVGFTAR 240

Query: 241 VFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCVAVIGAANYRFPGLTILGLVLSLMWT 300
           VFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCVAVIGAANYRFPGLTILGLVLSLMWT
Sbjct: 241 VFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCVAVIGAANYRFPGLTILGLVLSLMWT 300

Query: 301 AEVMRNVANLTASRVIALYYLRGMQSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVA 360
           AEVMRNVANLTASRVIALYYLRGMQSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVA
Sbjct: 301 AEVMRNVANLTASRVIALYYLRGMQSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVA 360

Query: 361 RGLNLLEGEDEFMFSCAHCCLHVMNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTM 420
           RGLNLLEGEDEFMFSCAHCCLHVMNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTM
Sbjct: 361 RGLNLLEGEDEFMFSCAHCCLHVMNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTM 420

Query: 421 ADGWWCLQIAAYGRGFVQASRSTWEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVAL 480
           ADGWWCLQIAAYGRGFVQASRSTWEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVAL
Sbjct: 421 ADGWWCLQIAAYGRGFVQASRSTWEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVAL 480

Query: 481 AGSWTFATHKHYTATVSLLAFFVGYLMVRTAASRPTSLDTFSFGDLFRASEKVSRDTVTS 540
           AGSWTFATHKHYTATVSLLAFFVGYLMVRTAASRPTSLDTFSFGDLFRASEKVSRDTVTS
Sbjct: 481 AGSWTFATHKHYTATVSLLAFFVGYLMVRTAASRPTSLDTFSFGDLFRASEKVSRDTVTS 540

Query: 541 RYQIVSDRWI 550
           RYQIVSDRWI
Sbjct: 541 RYQIVSDRWI 550



>Os03g0651300 Protein of unknown function DUF580 family protein
          Length = 483

 Score =  115 bits (288), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 51/376 (13%)

Query: 157 PVEGAVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVA 216
           P+  +V +SI+    W       P   +   LW++  + LA   +++     A +G+GV 
Sbjct: 109 PLASSVIVSIIAGCFWVILAVINPPKAIKTSLWAAPVLALACDVVILLVGNGAALGIGVL 168

Query: 217 MVMFSIGTGLYACWVTR-RVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCV 275
           +V+ +I   LY+CW +  R+     V   ++         +     ++ A F ++S W V
Sbjct: 169 IVVVAIAVALYSCWASGPRLQHATAVLSTSLNAAHLPPTASCLVVFVILAAFGYMSFWTV 228

Query: 276 AV--IGAANYRFPGLT---ILGLVLSLMWTAEVMR-----NVANLTASRVIALYYLRGMQ 325
           A+  I AA   F       ++ L++S+ WT +V+R      VA L  +R++  Y +R   
Sbjct: 229 AISCIAAAEGYFMNFKMAYVVALLVSMAWTMQVLRYFVYVAVAKLAHTRLV--YGVRMPG 286

Query: 326 SSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVARGLN-LLEGEDEFMFSCAHCCLHVM 384
            +V+      +  + G  C+G++ VP I A+R  AR +N + +G DEF   C  CCL + 
Sbjct: 287 GTVEAFCGTMMGPSFGDICMGAVAVPVIAAVRSFARAINAVTKGNDEF---CQGCCLAIS 343

Query: 385 NAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRSTW 444
           + +    N W FVHV   G  F V                              ASR  W
Sbjct: 344 DKLMGRVNRWGFVHVGVRGKAFCV------------------------------ASRDVW 373

Query: 445 EQFERLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFA---THKHYTATVSLLAF 501
             F  L+G+  LVDSD+T S CFL+ VT GAL   +AGSW  A    HK     V++ +F
Sbjct: 374 SLFV-LRGISKLVDSDLTGSFCFLSAVTGGALASLVAGSWALAMDKEHKELALPVAIYSF 432

Query: 502 FVGYLMVRTAASRPTS 517
            +GY M R   + P +
Sbjct: 433 LIGYYMCRMIIAWPQA 448



>Os02g0580100 Protein of unknown function DUF580 family protein
          Length = 523

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 45/304 (14%)

Query: 218 VMFSIGTGL---YACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWC 274
           V F++G  L   Y   V  R  FT  V ++AV+ V +   +   AY  V     W+++W 
Sbjct: 182 VAFAVGGALHFLYVMSVLDRFPFTMLVLQKAVRMVWELPDVMRIAYAFVLVMLCWMALWS 241

Query: 275 VAVIGAANYRFPG----LTILGLVLSLMWTAEVMRNVANLTASRVIALYYLRGMQSSVQF 330
             V G   +  P       +L   +SL WT  V+ N  ++  S ++ L  + G Q++   
Sbjct: 242 FGVSGILAFHIPNGGQWWALLIFSVSLFWTGAVLSNTVHVIVSGMVFLVLIHGGQAAASM 301

Query: 331 -------SFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHV 383
                  S Q A++ + GS C GSLF   I  LR   RG+    G +E +  C     H+
Sbjct: 302 PPKPLLKSLQYAVTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHI 361

Query: 384 MNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRST 443
           +  +  F N +A+V                              QIA  G+ F +++R  
Sbjct: 362 VETLVRFFNKYAYV------------------------------QIAINGQSFNRSARDA 391

Query: 444 WEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFV 503
           WE F+   G+ ALV  D + +V  ++ +  G +     G WT+         V   +  +
Sbjct: 392 WELFQS-TGVEALVAYDCSGAVLLMSTILGGLITGTCTGVWTYFKQSDKAIMVGSTSMLM 450

Query: 504 GYLM 507
           G ++
Sbjct: 451 GMIL 454



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,947,791
Number of extensions: 692967
Number of successful extensions: 5039
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5028
Number of HSP's successfully gapped: 4
Length of query: 550
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 444
Effective length of database: 11,501,117
Effective search space: 5106495948
Effective search space used: 5106495948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)