Os03g0651300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF580 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0651300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF580 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.97 | 0.351 | 8.37 | 0.45 | 1.26 | 1.18 | 0.609 | -1.32 | -0.0031 | 21.7 | 20.56 | 252 | -- | -- |
| 57.19 | 0.352 | 8.34 | 0.677 | 1.22 | 1.12 | 0.624 | -- | 0.0612 | 21.7 | 19.2 | 315 | -- | -- |
| 57.38 | 0.353 | 8.37 | 0.419 | 1.26 | 1.19 | -- | -1.36 | -0.00735 | 21.7 | 20.53 | 250 | -- | -- |
| 58.5 | 0.356 | 8.34 | 0.657 | 1.21 | 1.12 | -- | -- | 0.059 | 21.6 | 19.1 | 329 | -- | -- |
| 116.53 | 0.503 | 8.37 | 0.219 | -- | 1.78 | -- | -1.38 | -0.129 | -- | 21.18 | 624 | -- | -- |
| 77.47 | 0.413 | 8.31 | 0.948 | 1.43 | -- | 0.696 | -- | 0.256 | 20.6 | -- | -- | -- | -- |
| 79.04 | 0.416 | 8.31 | 0.926 | 1.43 | -- | -- | -- | 0.256 | 20.6 | -- | -- | -- | -- |
| 117.29 | 0.504 | 8.34 | 0.417 | -- | 1.98 | -- | -- | -0.0841 | -- | 17 | 624 | -- | -- |
| 63.64 | 0.372 | 8.39 | -- | 1.4 | 1.15 | -- | -- | -0.123 | 20.5 | 16.52 | 7656 | -- | -- |
| 193.61 | 0.65 | 8.27 | 0.921 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 101.66 | 0.472 | 8.33 | -- | 1.42 | -- | -- | -- | 0.153 | 20.6 | -- | -- | -- | -- |
| 121.35 | 0.513 | 8.36 | -- | -- | 2.15 | -- | -- | -0.147 | -- | 16.6 | 634 | -- | -- |
| 216 | 0.686 | 8.29 | -- | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 9 | 43.49 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 48 | 48.09 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 74 | 48.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 174 | 51.73 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 218 | 52.59 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 220 | 52.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 264 | 53.11 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 270 | 53.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 276 | 53.20 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 279 | 53.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 290 | 53.32 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 345 | 53.77 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 365 | 53.88 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 373 | 53.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 385 | 54.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 389 | 54.04 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 396 | 54.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 400 | 54.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 17 |
| 402 | 54.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 409 | 54.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 429 | 54.25 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 432 | 54.27 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 437 | 54.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 445 | 54.35 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 451 | 54.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 462 | 54.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 463 | 54.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 464 | 54.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 465 | 54.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 467 | 54.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 469 | 54.47 | temperature | 15.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 475 | 54.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 9 |
| 477 | 54.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 482 | 54.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 10 |
| 483 | 54.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 484 | 54.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 508 | 54.66 | temperature | 10.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 526 | 54.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 528 | 54.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 547 | 54.84 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 554 | 54.86 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 583 | 54.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 586 | 55.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 592 | 55.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 7 |
| 593 | 55.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 612 | 55.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 636 | 55.29 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 640 | 55.31 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 642 | 55.31 | temperature | 30.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 674 | 55.39 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 680 | 55.43 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 696 | 55.50 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 703 | 55.51 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 719 | 55.57 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 720 | 55.57 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 723 | 55.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 737 | 55.61 | temperature | 30.0 | 270 | < th | dose dependent | sin | 23 | NA |
| 749 | 55.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 797 | 55.84 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 798 | 55.84 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 804 | 55.84 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 822 | 55.88 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 893 | 56.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 899 | 56.07 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 901 | 56.08 | temperature | 20.0 | 270 | > th | dose dependent | no | NA | NA |
| 906 | 56.10 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 948 | 56.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 953 | 56.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 965 | 56.23 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 969 | 56.23 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 972 | 56.24 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 980 | 56.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 982 | 56.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |