Os07g0656100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF580 family protein.
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Os07g0656100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF580 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.35 | 0.391 | 10.3 | -0.852 | 1.42 | 0.876 | 0.302 | -0.0838 | -0.223 | 10.2 | 25.57 | 1260 | -- | -- |
| 69.35 | 0.388 | 10.3 | -0.833 | 1.42 | 0.87 | 0.305 | -- | -0.216 | 10.2 | 25.66 | 1260 | -- | -- |
| 69.7 | 0.389 | 10.3 | -0.87 | 1.42 | 0.878 | -- | -0.198 | -0.229 | 10.2 | 25.6 | 1274 | -- | -- |
| 69.7 | 0.389 | 10.3 | -0.819 | 1.4 | 0.835 | -- | -- | -0.214 | 10.2 | 25.7 | 1311 | -- | -- |
| 176.34 | 0.618 | 10.3 | -1.07 | -- | 0.893 | -- | -0.779 | -0.292 | -- | 26.4 | 5881 | -- | -- |
| 98.32 | 0.465 | 10.3 | -0.55 | 1.33 | -- | 0.203 | -- | -0.144 | 9.89 | -- | -- | -- | -- |
| 98.47 | 0.465 | 10.3 | -0.542 | 1.33 | -- | -- | -- | -0.143 | 9.9 | -- | -- | -- | -- |
| 176.9 | 0.619 | 10.3 | -0.89 | -- | 0.84 | -- | -- | -0.251 | -- | 26.1 | 5878 | -- | -- |
| 85.97 | 0.432 | 10.2 | -- | 1.45 | 0.727 | -- | -- | -0.0771 | 10.1 | 26.48 | 1192 | -- | -- |
| 204.42 | 0.668 | 10.3 | -0.557 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 106.22 | 0.482 | 10.2 | -- | 1.33 | -- | -- | -- | -0.0827 | 9.93 | -- | -- | -- | -- |
| 193.74 | 0.648 | 10.3 | -- | -- | 0.625 | -- | -- | -0.0904 | -- | 27.96 | 5882 | -- | -- |
| 212.6 | 0.681 | 10.3 | -- | -- | -- | -- | -- | -0.0812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 68.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 18 | 69.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 23 | 69.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 41 | 69.23 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 53 | 69.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 67 | 69.35 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 143 | 69.60 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 224 | 69.78 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 281 | 70.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 339 | 70.24 | humidity | 80 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 349 | 70.29 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 353 | 70.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 357 | 70.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 6 |
| 380 | 70.46 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 384 | 70.47 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 395 | 70.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 423 | 70.54 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 450 | 70.60 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 481 | 70.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 496 | 70.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 503 | 70.77 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 505 | 70.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 507 | 70.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 551 | 70.84 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 570 | 70.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 573 | 70.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 592 | 70.92 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 677 | 71.02 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 680 | 71.03 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 690 | 71.04 | humidity | 50 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 696 | 71.06 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 719 | 71.08 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 793 | 71.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 797 | 71.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 811 | 71.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 813 | 71.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 880 | 71.22 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |