BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0656100 Os07g0656100|J075140O11
(550 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13760.1 | chr5:4442102-4444565 FORWARD LENGTH=570 454 e-128
AT3G04440.1 | chr3:1178718-1180537 FORWARD LENGTH=483 181 8e-46
AT3G03700.1 | chr3:916503-918327 FORWARD LENGTH=483 181 9e-46
AT5G17830.1 | chr5:5893382-5895367 FORWARD LENGTH=475 122 4e-28
AT1G25500.2 | chr1:8955437-8957793 REVERSE LENGTH=489 71 2e-12
>AT5G13760.1 | chr5:4442102-4444565 FORWARD LENGTH=570
Length = 569
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/427 (54%), Positives = 291/427 (68%), Gaps = 33/427 (7%)
Query: 90 TP-PQVAFASLNSRVYTNGITLCVFLVHLXXXXXXXXXXXXXXXKDIVQHPRSRNAQRER 148
TP PQ ASLNS YTN L +F+ H + ++ S ++E+
Sbjct: 124 TPTPQQTLASLNSTKYTNKFFLLLFIFHKVVAIGFVGFLVFRGVQGLIGSNGSVK-RKEK 182
Query: 149 SLLREWLPPVEGAVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMP 208
+LR LP VE A LSI+LAF WQ A R WP M+ ILWS+F ++L+ G +L+CF MP
Sbjct: 183 KILRFLLPQVEAASLLSIILAFLWQMAFRIWPDFMIHFILWSTFLMSLSSGILLLCFQMP 242
Query: 209 ATVGLGVAMVMFSIGTGLYACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFV 268
AT +GV ++ FSIG GLYACWVTRR+ F +++ ++++PV KF LN P Y M+AAGF+
Sbjct: 243 ATDAVGVCLIAFSIGNGLYACWVTRRIKFCSKILVKSLEPVSKFSDLNLPTYYMLAAGFL 302
Query: 269 WISVWCVAVIGAANYRFPGLTILGLVLSLMWTAEVMRNVANLTASRVIALYYLRGMQSSV 328
W+S+W VIGA N+ FP L I+GLVLSL WT EVMRN+ NLT SRVIALYYLRGMQSS
Sbjct: 303 WMSMWIFGVIGALNFYFPPLVIIGLVLSLAWTTEVMRNIVNLTVSRVIALYYLRGMQSST 362
Query: 329 QFSFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHVMNAIF 388
+FSFQRALS NLGSACLGSLFVPTIEALRI+ARGLNLL+GEDEFMF CA+CCL +M+ IF
Sbjct: 363 RFSFQRALSRNLGSACLGSLFVPTIEALRILARGLNLLKGEDEFMFCCANCCLRLMDFIF 422
Query: 389 EFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRSTWEQFE 448
E GN WAFV QIAAYG+GFV+AS+ TW+ FE
Sbjct: 423 EHGNGWAFV------------------------------QIAAYGKGFVRASQDTWKLFE 452
Query: 449 RLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFVGYLMV 508
+ M +VD+DITSS+CFLTG+ SG +C+ +A +WT +K +TAT+SLLAFF+GYLM
Sbjct: 453 D-EDMVEIVDADITSSICFLTGICSGCVCLIVAAAWTHTVYKPFTATISLLAFFIGYLMT 511
Query: 509 RTAASRP 515
R + + P
Sbjct: 512 RISMALP 518
>AT3G04440.1 | chr3:1178718-1180537 FORWARD LENGTH=483
Length = 482
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 176/366 (48%), Gaps = 43/366 (11%)
Query: 151 LREWLPPVEGAVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMPAT 210
L++W PP+ +VA+S + + AWQ P V W S +T +VG +L+
Sbjct: 90 LKKWYPPLLASVAVSGIASLAWQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVD 149
Query: 211 VGLGVAMVMFSIGTGLYACWVTRRVGFTARVFERAVQ-PVDKFRGLNGPAYLM--VAAGF 267
G+G V+F+I LY CW+T R+ +T ++ A P + R + + ++ V +GF
Sbjct: 150 AGIGAVFVLFAITQSLYGCWITPRLEYTDKILSLATAFPPARTREVVCLSIIVSVVYSGF 209
Query: 268 VWISVWCVAVIGAANYRFPGLTIL---GLVLSLMWTAEVMRNVANLTASRVIALYYLRGM 324
+ V IG A L IL +++SL WT +V++NV + SR + + G
Sbjct: 210 L------VTGIGGATSTRTNLDILFISVIIISLAWTMQVIKNVQQVAISRARYVNFAHGE 263
Query: 325 QSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGE-DEFMFSCAHCCLHV 383
+F+ + + GS C+GS VP I +R R +NL+ G DE M+S A C +
Sbjct: 264 DMDAWNAFRITMKHLTGSICVGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTI 323
Query: 384 MNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRST 443
N + GN W FVHV Y +GF++AS T
Sbjct: 324 ANKLITLGNRWGFVHV------------------------------GTYDKGFMEASSDT 353
Query: 444 WEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFV 503
W++F G+ L+DSD+TSS CFL+ V+ GA+ AG W HK Y V+L AF +
Sbjct: 354 WKKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAVSSLTAGIWMLLIHKDYALEVTLYAFII 413
Query: 504 GYLMVR 509
GY + R
Sbjct: 414 GYFVGR 419
>AT3G03700.1 | chr3:916503-918327 FORWARD LENGTH=483
Length = 482
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 176/366 (48%), Gaps = 43/366 (11%)
Query: 151 LREWLPPVEGAVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMPAT 210
L++W PP+ +VA+S + + AWQ P V W S +T +VG +L+
Sbjct: 90 LKKWYPPLLASVAVSGIASLAWQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVD 149
Query: 211 VGLGVAMVMFSIGTGLYACWVTRRVGFTARVFERAVQ-PVDKFRGLNGPAYLM--VAAGF 267
G+G V+F+I LY CW+T R+ +T ++ A P + R + + ++ V +GF
Sbjct: 150 AGIGAVFVLFAITQSLYGCWITPRLEYTDKILSLATAFPPARTREVVCLSIIVSVVYSGF 209
Query: 268 VWISVWCVAVIGAANYRFPGLTIL---GLVLSLMWTAEVMRNVANLTASRVIALYYLRGM 324
+ V IG A L IL +++SL WT +V++NV + SR + + G
Sbjct: 210 L------VTGIGGATSTRTNLDILFISVIIISLAWTMQVIKNVQQVAISRARYVNFAHGE 263
Query: 325 QSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGE-DEFMFSCAHCCLHV 383
+F+ + + GS C+GS VP I +R R +NL+ G DE M+S A C +
Sbjct: 264 DMDAWNAFRITMKHLTGSICVGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTI 323
Query: 384 MNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRST 443
N + GN W FVHV Y +GF++AS T
Sbjct: 324 ANKLITLGNRWGFVHV------------------------------GTYDKGFMEASSDT 353
Query: 444 WEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFV 503
W++F G+ L+DSD+TSS CFL+ V+ GA+ AG W HK Y V+L AF +
Sbjct: 354 WKKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAVSSLTAGIWMLLIHKDYALEVTLYAFII 413
Query: 504 GYLMVR 509
GY + R
Sbjct: 414 GYFVGR 419
>AT5G17830.1 | chr5:5893382-5895367 FORWARD LENGTH=475
Length = 474
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 152 REWLPPVEGAVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCF--SMPA 209
++W P+ +VA+S VL+ AW RA V W + T++VG L+ S P
Sbjct: 89 KKWYTPLLSSVAVSGVLSIAWNCFFVCNIRATVKATFWFTPLFTISVGLFLILLDKSNPV 148
Query: 210 TVGLGVAMVMFSIGTGLY-ACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFV 268
+ +G +V +SI T +Y + VT R FT + A G+ +A V
Sbjct: 149 VLWIGALLVFYSIVTAVYGSLHVTNRHEFTFQTMSTAT-------GILPARTRAIAVVSV 201
Query: 269 WISVW----CVAVIGAAN---YRFPGLTILGLVLSLMWTAEVMRNVANLTASRVIALYYL 321
ISV+ VA IG A R L I +V++L WT +V++NV + S+ I +Y+
Sbjct: 202 IISVFYSDFLVAGIGGATATGTRLDILFISIIVINLAWTMQVIKNVQEVAISKAIYVYFS 261
Query: 322 RGMQSSVQFSFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCL 381
R + + L LGS C+GS VP I R R N +++ C
Sbjct: 262 RDDLMNACDALGVTLKKQLGSVCIGSTLVPLIVLFRGTIRCCN------RDIYASTPGCN 315
Query: 382 HVMNAIFEFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASR 441
+ N I GN + FVHV A+ +G QAS
Sbjct: 316 WIANHIILGGNRYGFVHV------------------------------GAHNKGLRQASS 345
Query: 442 STWEQFERLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAF 501
TW +F + L+D DITSS+CF + + GA+ AG W K + +++ AF
Sbjct: 346 DTWRRFRTIPEFEQLIDFDITSSICFFSAMGIGAIAALTAGVWELLIDKDHYFELTIYAF 405
Query: 502 FVGYLMVRTAAS 513
+GY + R +++
Sbjct: 406 IIGYFVGRVSSA 417
>AT1G25500.2 | chr1:8955437-8957793 REVERSE LENGTH=489
Length = 488
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 115/282 (40%), Gaps = 53/282 (18%)
Query: 226 LYACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGF-----VWISVWCVAVIG- 279
LY V R+ FT V +A++ V GL P +MVA F +W+S+W G
Sbjct: 167 LYVISVIDRLPFTMLVLRKALKLV---WGL--PKVIMVAHAFTVVMLLWMSLWSFGAAGV 221
Query: 280 -AANYRFPGLTILGLVLS--LMWTAEVMRNVANLTASRVIALYYLRGMQSSVQF------ 330
A++ G L +VLS L WT V+ N ++ S ++ Q
Sbjct: 222 VASSMGDEGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFHVLFHCGQEESSSLPPSSL 281
Query: 331 --SFQRALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHVMNAIF 388
S + A++ + GS C GSLF I LR RG +E + C H++ +
Sbjct: 282 VDSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKICGNECLLCCVDFLFHLVETLV 341
Query: 389 EFGNSWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRSTWEQFE 448
F N +A+V QIA YG+GF +++R WE F+
Sbjct: 342 RFFNKYAYV------------------------------QIAVYGKGFNKSARDAWELFQ 371
Query: 449 RLQGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHK 490
G+ ALV D + +V + + G + + G W + +
Sbjct: 372 S-TGVEALVAYDCSGAVLLMGTIFGGLITGSCIGIWAWIKYS 412
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,195,273
Number of extensions: 398270
Number of successful extensions: 2448
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2433
Number of HSP's successfully gapped: 5
Length of query: 550
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 446
Effective length of database: 8,255,305
Effective search space: 3681866030
Effective search space used: 3681866030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)