BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0562400 Os07g0562400|AK072020
(534 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0562400 Major facilitator superfamily protein 910 0.0
Os07g0562300 Major facilitator superfamily protein 795 0.0
Os01g0330500 Major facilitator superfamily protein 681 0.0
Os01g0199350 352 4e-97
Os04g0631100 Major facilitator superfamily protein 176 5e-44
Os07g0561800 Conserved hypothetical protein 108 7e-24
Os08g0148233 Major facilitator superfamily MFS_1 protein 71 2e-12
>Os07g0562400 Major facilitator superfamily protein
Length = 534
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/534 (89%), Positives = 478/534 (89%)
Query: 1 MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSV 60
MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSV
Sbjct: 1 MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSV 60
Query: 61 FTDAEPTWHCTGVAAGDPGSFXXXXXXXXXXXXXXXPPGTWEWDRPAETSVVSEWALKCG 120
FTDAEPTWHCTGVAAGDPGSF PPGTWEWDRPAETSVVSEWALKCG
Sbjct: 61 FTDAEPTWHCTGVAAGDPGSFCSLAAASASASACALPPGTWEWDRPAETSVVSEWALKCG 120
Query: 121 GGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVW 180
GGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVW
Sbjct: 121 GGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVW 180
Query: 181 VYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTXXXXXXXXXXXXXMSLPALAYTLRE 240
VYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNT MSLPALAYTLRE
Sbjct: 181 VYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTVSVAAFVFFSVGFMSLPALAYTLRE 240
Query: 241 ASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLNGGEGITTS 300
ASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLNGGEGITTS
Sbjct: 241 ASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLNGGEGITTS 300
Query: 301 SFTKLETCXXXXXXXXXXXXXMFSTLRSICEXXXXXXXXXXXXXXXFGVGVVYYGMPLSV 360
SFTKLETC MFSTLRSICE FGVGVVYYGMPLSV
Sbjct: 301 SFTKLETCAGEVGDGVAGGEGMFSTLRSICERRWALRRLAAITTATFGVGVVYYGMPLSV 360
Query: 361 GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPDPEA 420
GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPDPEA
Sbjct: 361 GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPDPEA 420
Query: 421 GAGGSHLRLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPML 480
GAGGSHLRLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPML
Sbjct: 421 GAGGSHLRLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPML 480
Query: 481 VALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRLSDTMEDEEEAAAVLSGG 534
VALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRLSDTMEDEEEAAAVLSGG
Sbjct: 481 VALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRLSDTMEDEEEAAAVLSGG 534
>Os07g0562300 Major facilitator superfamily protein
Length = 537
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/521 (80%), Positives = 431/521 (82%), Gaps = 10/521 (1%)
Query: 1 MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSV 60
MADAATTPLLTSHEAKPAKA SIDDAIETYIGATGA QL A+LLAFAWAF+AQQVF+SV
Sbjct: 1 MADAATTPLLTSHEAKPAKAPSIDDAIETYIGATGAGQLFKAILLAFAWAFDAQQVFISV 60
Query: 61 FTDAEPTWHCTGVAAGDPGSFXXXXXXXXXXXXXXXPPGTWEWDRPAETSVVSEWALKCG 120
FTDAEP WHCT A DP PPG W WDRPAETSVVSEWALKCG
Sbjct: 61 FTDAEPRWHCT--AGADPSC------SPGAASPCALPPGAWAWDRPAETSVVSEWALKCG 112
Query: 121 GGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVW 180
GGGPALVSLPASSFFAGNLAGGFLLTTLADT LGRRKMLVLSL TMSVAGVLT FSPNVW
Sbjct: 113 GGGPALVSLPASSFFAGNLAGGFLLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVW 172
Query: 181 VYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTXXXXXXXXXXXXXMSLPALAYTLRE 240
VYAALRFV GF RS GTSAMVLSTELVGKWWRNT MSLPALAYTLRE
Sbjct: 173 VYAALRFVSGFGRSMVGTSAMVLSTELVGKWWRNTVSVAGFVLFSVGFMSLPALAYTLRE 232
Query: 241 ASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLNGGEGITTS 300
ASWR MYVWTSLPSLCYAVLLYFLVQESPRWLLVRGR QEAI ALRQIASLNGGEG+TTS
Sbjct: 233 ASWRTMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRNQEAIEALRQIASLNGGEGVTTS 292
Query: 301 SFTKLETCXXXXXXXXXXXXXMFSTLRSICEXXXXXXXXXXXXXXXFGVGVVYYGMPLSV 360
SF+ L+ C MF++LR I E FGVGVVYYG+PLSV
Sbjct: 293 SFSMLDACAVEVGDGVAGGDGMFASLRLIWERRWAFQRLAAMMTASFGVGVVYYGLPLSV 352
Query: 361 GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPDPEA 420
GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPD EA
Sbjct: 353 GSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCSLACVVIPDEEA 412
Query: 421 GAGGSHLRLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPML 480
G GG LRLAAELASFFASCAA+DV+LMYSIELFPTSVRNSAVGLVR+A VLGGVVAPML
Sbjct: 413 GTGG--LRLAAELASFFASCAAFDVMLMYSIELFPTSVRNSAVGLVRKAAVLGGVVAPML 470
Query: 481 VALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRLSDTM 521
VALGRERSYWSFGVFGL VGCLGLFVT+LPETKGRRLSDTM
Sbjct: 471 VALGRERSYWSFGVFGLAVGCLGLFVTWLPETKGRRLSDTM 511
>Os01g0330500 Major facilitator superfamily protein
Length = 691
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/548 (71%), Positives = 418/548 (76%), Gaps = 38/548 (6%)
Query: 1 MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSV 60
+ A TTPLLTSHEA+P SIDD IE YIGATGARQLL AMLLAFAWAF+AQQVFMSV
Sbjct: 152 LISATTTPLLTSHEAEP----SIDDVIEAYIGATGARQLLKAMLLAFAWAFDAQQVFMSV 207
Query: 61 FTDAEPTWHCTGV------AAGDPGSFXXXXXXXXXXXXXXXPPGTWEWDRPAETSVVSE 114
FTDAEP WHCTGV AA D GS PPGTWEWDRPAETSVVS+
Sbjct: 208 FTDAEPPWHCTGVVDAAAAAAADSGS--SCSPPAASASPCALPPGTWEWDRPAETSVVSD 265
Query: 115 WALKCGGGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTV 174
WAL CG PALVSLPASSFFAGNLAGGFLL TLADT LGRRKML+LSLVTMSVA LT
Sbjct: 266 WALNCG---PALVSLPASSFFAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTA 322
Query: 175 FSPNVWVYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTXXXXXXXXXXXXXMSLPAL 234
FSPNVWVY+ALRFV GF RS GTSAMVLSTEL GK WRNT +SLPAL
Sbjct: 323 FSPNVWVYSALRFVSGFGRSMVGTSAMVLSTELDGKRWRNTVSAAGFVFFSVGFVSLPAL 382
Query: 235 AYTLREASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLN-G 293
AYT REASWRNMYVWTSLPSLCYAVLLY LVQESPRWLLVRGRKQEAI A+RQIASLN G
Sbjct: 383 AYTFREASWRNMYVWTSLPSLCYAVLLYLLVQESPRWLLVRGRKQEAIEAVRQIASLNGG 442
Query: 294 GEGITTSSFTKLETCXXXXXXXXXXXXXMFSTLRSICEXXXXXXXXXXXXXXXFGVGVVY 353
G GITTSSF+ L+ C MF+TL SI E FGVG+VY
Sbjct: 443 GGGITTSSFSMLDAC---AVELGDGGEGMFATLHSIWERRRALRRLAAITAASFGVGMVY 499
Query: 354 YGMPLSVGSLS-SDLYLSVAYNAAAELPSSVLSWLLMGR-FNRRSSLVALTAASGLCSLA 411
YGMPL+VGSLS S+LYLSVAYNA AELPSS+L+WLLMGR FNRR S+VALT ASGLCSLA
Sbjct: 500 YGMPLNVGSLSPSNLYLSVAYNAVAELPSSILAWLLMGRWFNRRGSVVALTTASGLCSLA 559
Query: 412 ----CVVIPDPEAGAGGSHLRLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVR 467
VV+PD GA R+AAE+ASFFASC AYD++LMY+IELFPTSVRNSAVGLVR
Sbjct: 560 ACVPAVVLPD---GA-----RMAAEVASFFASCTAYDMMLMYTIELFPTSVRNSAVGLVR 611
Query: 468 QAGVLGGVVAPMLVALGRE-RSYW--SFGVFGLTVGCLGLFVTFLPETKGRRLSDTMEDE 524
QA LGGVVAP+LVALGRE SYW SFGVFGL VGCLGL VT LPET+GRRLSDTME+E
Sbjct: 612 QAVALGGVVAPVLVALGRETTSYWSSSFGVFGLAVGCLGLLVTCLPETRGRRLSDTMEEE 671
Query: 525 EEAAAVLS 532
E AAVLS
Sbjct: 672 E--AAVLS 677
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 107/142 (75%), Gaps = 8/142 (5%)
Query: 4 AATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAMLLAFAWAFEAQQVFMSVFTD 63
A TT LLTSHEAKPAKA SI DAIE YIGATGARQLL AMLLAFAWAF+AQQVFMSVFTD
Sbjct: 5 ATTTLLLTSHEAKPAKAPSIHDAIEVYIGATGARQLLKAMLLAFAWAFDAQQVFMSVFTD 64
Query: 64 AEPTWHCTGV------AAGDPGSFXXXXXXXXXXXXXXXPPGTWEWDRPAETSVVSEWAL 117
AEP WHCTGV AAGD GS P GTWEWDR A+TSVVS+WAL
Sbjct: 65 AEPPWHCTGVVDAVEAAAGDSGS--SCSSPATSASPCALPLGTWEWDRLAKTSVVSDWAL 122
Query: 118 KCGGGGPALVSLPASSFFAGNL 139
C GGGPALVSLPASSFF GNL
Sbjct: 123 NCSGGGPALVSLPASSFFTGNL 144
>Os01g0199350
Length = 322
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 220/333 (66%), Gaps = 60/333 (18%)
Query: 111 VVSEWALKCGGGG-PALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVA 169
VV EW LKCGGGG PAL+SLPA+SFFAGNLAG FLLTTLADT LGRRKMLV+SL MSVA
Sbjct: 3 VVLEWTLKCGGGGGPALISLPAASFFAGNLAGSFLLTTLADTHLGRRKMLVMSLANMSVA 62
Query: 170 GVLTVFSPNVWVYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTXXXXXXXXXXXXXM 229
V+T FSPNVWV AALRF RS AGTSAMVLSTELVGKWWRNT
Sbjct: 63 VVITAFSPNVWVNAALRF----GRSMAGTSAMVLSTELVGKWWRNT-------------- 104
Query: 230 SLPALAYTLREASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIA 289
ESPRWLLV GRKQEAI ALRQIA
Sbjct: 105 -------------------------------------ESPRWLLVHGRKQEAIEALRQIA 127
Query: 290 SLNGGEGITTSSFTKLETCXXXXXXXXXXXXXMFSTLRSICEXXXXXXXXXXXXXXXFGV 349
SLN GEGIT SSFT L+ C M + LRSICE F +
Sbjct: 128 SLNDGEGITMSSFTMLDMCAVEVGDGVAGGEGMLAMLRSICEWWWALQRLATITTASFSI 187
Query: 350 GVVYYGMPLSVGSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAASGLCS 409
GVVYYGMPLSVGSLS DLY SVAYNAAAELPSS LSWLLMGRFN+RSS+V LTA SGLCS
Sbjct: 188 GVVYYGMPLSVGSLSFDLY-SVAYNAAAELPSSFLSWLLMGRFNQRSSVVELTAVSGLCS 246
Query: 410 LACVVIP-DPEAGAGGSHLRLAAELASFFASCA 441
LACVVIP DPEAG GG LRLAAEL+SFFASCA
Sbjct: 247 LACVVIPADPEAGTGG--LRLAAELSSFFASCA 277
>Os04g0631100 Major facilitator superfamily protein
Length = 360
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 182/368 (49%), Gaps = 17/368 (4%)
Query: 171 VLTVFSPNVWVYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTXXXXXXXXXXXXXMS 230
+LT +PN W YAALR + GF + G + VL+TE VG R +
Sbjct: 1 MLTAMAPNYWAYAALRLLTGFSAGSVGLCSFVLATEPVGPSRRGAAGMSTFYFFSGGIAA 60
Query: 231 LPALAYTLREASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIAS 290
L +A SWR +YV TSLPSL + V + V ESPRW LVR R +A+ +R IAS
Sbjct: 61 LAGIAALF-PTSWRMLYVVTSLPSLVFVVAVLPFVSESPRWYLVRRRADDAMRVVRAIAS 119
Query: 291 LNGGEGITTSSFTKLET-----CXXXXXXXXXXXXXMFSTLRSICEXXXXXXXXXXXXXX 345
NG I KL+ ++ +
Sbjct: 120 SNG-RSIPDDVSLKLDDEGDDDNGAGAGKVVDSSASASGSIIDVFRSRTTRFRLVLSVVI 178
Query: 346 XFGVGVVYYGMPLSVGSLSSDLYLSVAYNAAAELPSSVLSWLLMGRFNRRSSLVALTAAS 405
VVYYG+ L+V +L ++LY+SV N+ AE+P+ +L+ LL+ RF R+ + S
Sbjct: 179 NLLASVVYYGLSLNVVNLKTNLYVSVLVNSLAEMPAYLLTALLLDRFGRKPLAIGTMLLS 238
Query: 406 GL-CSLACVVIPDPEAGAGGSHL-RLAAELASFFASCAAYDVLLMYSIELFPTSVRNSAV 463
G+ CS ++ AGAG + RLA + F A Y++L +Y+ ELFPT+VRN+A+
Sbjct: 239 GISCSAGSLI-----AGAGAMRVARLACGVVGIFGMAATYNLLFIYTAELFPTAVRNAAL 293
Query: 464 GLVRQAGVLGGVVAPMLVALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRLSDTMED 523
G QA +G ++AP++V LG + FGV GL VG G V LPETK + + DTM
Sbjct: 294 GCTSQASQMGAILAPLVVVLGERVPFALFGVSGL-VG--GFLVFCLPETKNKPMYDTMAG 350
Query: 524 EEEAAAVL 531
EE L
Sbjct: 351 LEEGEKTL 358
>Os07g0561800 Conserved hypothetical protein
Length = 86
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 458 VRNSAVGLVRQAGVLGGVVAPMLVALGRERSYWSFGVFGLTVGCLGLFVTFLPETKGRRL 517
VRNSAVG+VRQA VLGGV APMLVALGRERS+WSFGVFGL VGCLGLF LPET+GR +
Sbjct: 1 VRNSAVGMVRQALVLGGVAAPMLVALGRERSFWSFGVFGLAVGCLGLFAVCLPETRGRSM 60
Query: 518 SDTM 521
SDTM
Sbjct: 61 SDTM 64
>Os08g0148233 Major facilitator superfamily MFS_1 protein
Length = 1088
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
Query: 374 NAAAELPSSVLSWLLMGRFNRRSSLVALTAASGL-CSLACVVIPDPEAGAGGSHL-RLAA 431
N+ AE+P+ +L+ LL+ RF R+ + + SG+ CS ++ AGAG + RLA
Sbjct: 637 NSLAEMPAYLLTALLLDRFGRKPLAIGMMLLSGISCSAGNLI-----AGAGDMRVARLAC 691
Query: 432 ELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPMLV 481
+ F A Y++L +Y+ ELFPT+VRN+A+G + QA +G ++AP +V
Sbjct: 692 GVVGIFGMAATYNLLFIYTAELFPTAVRNTALGWMSQASQMGAILAPPVV 741
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
Query: 374 NAAAELPSSVLSWLLMGRFNRRSSLVALTAASGL-CSLACVVIPDPEAGAGGSHL-RLAA 431
N+ AE+P+ +L+ LL+ RF R+ + + SG+ CS ++ AGAG + RLA
Sbjct: 910 NSLAEMPAYLLTALLLDRFGRKPLAIGMMLLSGISCSAGNLI-----AGAGDMRVARLAC 964
Query: 432 ELASFFASCAAYDVLLMYSIELFPTSVRNSAVGLVRQAGVLGGVVAPMLV 481
+ F A Y++L +Y+ ELFPT+VRN+A+G + QA +G ++AP +V
Sbjct: 965 GVVGIFGMAATYNLLFIYTAELFPTAVRNTALGWMSQASQMGAILAPPVV 1014
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,656,092
Number of extensions: 640907
Number of successful extensions: 1885
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1868
Number of HSP's successfully gapped: 13
Length of query: 534
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 428
Effective length of database: 11,501,117
Effective search space: 4922478076
Effective search space used: 4922478076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)