Os07g0561800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0561800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1176.94 | 1.61 | 6.18 | 5.22 | 4.67 | -6.42 | -1.05 | 6.34 | 0.128 | 15.1 | 25.01 | 4463 | 7.2 | 2.97 |
| 1222.25 | 1.63 | 6.34 | 4.65 | 4.85 | -6.31 | -1.52 | -- | 0.017 | 15.2 | 25.3 | 4431 | 7.42 | 3.33 |
| 1180.46 | 1.6 | 6.18 | 5.2 | 4.68 | -6.44 | -- | 6.39 | 0.119 | 15.1 | 25.02 | 4466 | 7.2 | 2.97 |
| 1162.69 | 1.59 | 6.31 | 4.28 | 4.81 | -6.06 | -- | -- | 0.129 | 14.9 | 25.5 | 6031 | 7.47 | 3.12 |
| 2370.97 | 2.27 | 6.19 | 5.21 | -- | -6.13 | -- | 6.32 | -0.00993 | -- | 25.04 | 4385 | 7.08 | 2.91 |
| 2307.97 | 2.25 | 6.76 | 0.834 | 4.83 | -- | -0.32 | -- | -1.82 | 15.3 | -- | -- | -- | -- |
| 2308.3 | 2.25 | 6.76 | 0.827 | 4.83 | -- | -- | -- | -1.82 | 15.3 | -- | -- | -- | -- |
| 2414.72 | 2.29 | 6.23 | 3.63 | -- | -5.82 | -- | -- | 0.364 | -- | 26.87 | 10367 | 7.71 | 3.35 |
| 1303.06 | 1.68 | 6.48 | -- | 4.75 | -6.04 | -- | -- | -0.768 | 14.9 | 26.29 | 6031 | 7.55 | 2.46 |
| 3628.04 | 2.81 | 6.77 | 0.622 | -- | -- | -- | -- | -1.95 | -- | -- | -- | -- | -- |
| 2326.34 | 2.26 | 6.78 | -- | 4.81 | -- | -- | -- | -1.91 | 15.3 | -- | -- | -- | -- |
| 2496.1 | 2.33 | 6.57 | -- | -- | -5.61 | -- | -- | -0.95 | -- | 26.1 | 5789 | 7.46 | 2.2 |
| 3638.26 | 2.82 | 6.78 | -- | -- | -- | -- | -- | -2.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1074.11 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 8 | 1082.11 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 19 | 1089.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 30 | 1090.56 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 41 | 1091.16 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 77 | 1092.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 92 | 1092.69 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 94 | 1092.70 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 103 | 1093.03 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 108 | 1093.19 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 115 | 1093.32 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 119 | 1093.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 125 | 1093.59 | temperature | 25 | 14400 | > th | dose dependent | sin | 2 | NA |
| 127 | 1093.63 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 11 |
| 139 | 1093.78 | temperature | 25 | 14400 | > th | dose dependent | sin | 21 | NA |
| 148 | 1093.97 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 149 | 1093.97 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 301 | 1097.67 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 321 | 1098.35 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 346 | 1099.30 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 350 | 1099.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 374 | 1100.74 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 423 | 1104.10 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 428 | 1104.36 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 434 | 1104.78 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 485 | 1108.31 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 501 | 1109.27 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 518 | 1110.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 553 | 1112.75 | temperature | 20 | 14400 | > th | dose dependent | sin | 10 | NA |
| 561 | 1113.35 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 609 | 1116.47 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 701 | 1122.79 | temperature | 25 | 14400 | < th | dose independent | sin | 12 | NA |
| 768 | 1127.48 | temperature | 25 | 14400 | > th | dose independent | sin | 13 | NA |
| 778 | 1127.83 | temperature | 25 | 14400 | < th | dose independent | sin | 8 | NA |
| 827 | 1131.18 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 840 | 1132.01 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 869 | 1133.86 | temperature | 25 | 14400 | > th | dose independent | sin | 8 | NA |
| 923 | 1135.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 926 | 1135.99 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 951 | 1137.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |