Os07g0562300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
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Os07g0562300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.75 | 0.539 | 6.31 | 0.0719 | 0.665 | -1.8 | -0.129 | 1.48 | 0.0663 | 10.4 | 16.52 | 300 | -- | -- |
| 133.68 | 0.539 | 6.34 | -0.161 | 0.649 | -1.72 | 0.00444 | -- | 0.0227 | 10.3 | 16.64 | 309 | -- | -- |
| 131.8 | 0.535 | 6.31 | 0.0646 | 0.666 | -1.78 | -- | 1.47 | 0.066 | 10.4 | 16.8 | 300 | -- | -- |
| 133.45 | 0.538 | 6.34 | -0.171 | 0.679 | -1.76 | -- | -- | 0.0037 | 10.4 | 16.11 | 291 | -- | -- |
| 145.31 | 0.561 | 6.32 | 0.151 | -- | -2 | -- | 1.56 | 0.105 | -- | 16.91 | 574 | -- | -- |
| 172.55 | 0.616 | 6.39 | -0.586 | 0.927 | -- | -0.123 | -- | -0.279 | 7.96 | -- | -- | -- | -- |
| 172.59 | 0.615 | 6.39 | -0.59 | 0.927 | -- | -- | -- | -0.279 | 7.97 | -- | -- | -- | -- |
| 147.2 | 0.565 | 6.34 | -0.109 | -- | -1.85 | -- | -- | 0.0523 | -- | 17.9 | 574 | -- | -- |
| 134.07 | 0.539 | 6.33 | -- | 0.68 | -2.01 | -- | -- | 0.0253 | 10.5 | 14.1 | 286 | -- | -- |
| 219.51 | 0.692 | 6.42 | -0.58 | -- | -- | -- | -- | -0.267 | -- | -- | -- | -- | -- |
| 181.75 | 0.631 | 6.38 | -- | 0.924 | -- | -- | -- | -0.213 | 8.01 | -- | -- | -- | -- |
| 147.47 | 0.566 | 6.34 | -- | -- | -1.88 | -- | -- | 0.0621 | -- | 17.9 | 584 | -- | -- |
| 228.39 | 0.705 | 6.4 | -- | -- | -- | -- | -- | -0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 4 | 131.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 9 | 131.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 11 | 131.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 12 | 131.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 13 | 132.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 17 | 132.11 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 26 | 132.31 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 27 | 132.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 30 | 132.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 32 | 132.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 50 | 133.02 | wind | 9 | 43200 | > th | dose dependent | sin | 13 | NA |
| 51 | 133.02 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 64 | 133.27 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 70 | 133.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 75 | 133.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 83 | 133.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 86 | 133.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 108 | 133.88 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 109 | 133.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 115 | 133.97 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 125 | 134.05 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 127 | 134.07 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 129 | 134.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 143 | 134.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 168 | 134.51 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 187 | 134.66 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 218 | 134.89 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 226 | 134.96 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 235 | 135.04 | wind | 9 | 43200 | > th | dose independent | sin | 12 | NA |
| 236 | 135.04 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 246 | 135.09 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 254 | 135.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 255 | 135.15 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 260 | 135.17 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 280 | 135.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 292 | 135.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 301 | 135.37 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 322 | 135.47 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 323 | 135.47 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 325 | 135.48 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 326 | 135.49 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 354 | 135.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 368 | 135.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 370 | 135.73 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 373 | 135.74 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 374 | 135.75 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 425 | 135.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 429 | 135.97 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 433 | 135.98 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 434 | 135.98 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 438 | 135.99 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 20 |
| 483 | 136.16 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 534 | 136.41 | wind | 9 | 43200 | < th | dose independent | sin | 12 | NA |
| 548 | 136.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 553 | 136.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 565 | 136.54 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 593 | 136.63 | atmosphere | 995 | 43200 | > th | dose independent | sin | 21 | NA |
| 613 | 136.69 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 633 | 136.75 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 20 |
| 721 | 137.00 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 14 |
| 725 | 137.01 | atmosphere | 995 | 43200 | < th | dose independent | sin | 20 | NA |
| 806 | 137.22 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 811 | 137.23 | wind | 9 | 43200 | > th | dose dependent | sin | 18 | NA |
| 814 | 137.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 850 | 137.33 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 895 | 137.43 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 913 | 137.48 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 14 |
| 928 | 137.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 932 | 137.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 937 | 137.51 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 943 | 137.52 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 981 | 137.60 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 982 | 137.60 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 11 | 1 |