BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0548500 Os07g0548500|AK109605
(365 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0548500 Conserved hypothetical protein 714 0.0
Os07g0548100 Cyclin-like F-box domain containing protein 317 9e-87
Os07g0547600 248 6e-66
Os07g0547700 241 5e-64
Os07g0547200 174 7e-44
Os07g0118800 Conserved hypothetical protein 165 5e-41
Os07g0118900 Cyclin-like F-box domain containing protein 162 5e-40
Os07g0548000 Cyclin-like F-box domain containing protein 122 6e-28
Os07g0229100 Cyclin-like F-box domain containing protein 119 4e-27
Os07g0142800 117 1e-26
Os12g0545400 100 3e-21
Os07g0547500 88 1e-17
>Os07g0548500 Conserved hypothetical protein
Length = 365
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/365 (96%), Positives = 351/365 (96%)
Query: 1 MLFDEVFSDPIEERGALELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHG 60
MLFDEVFSDPIEERGALELPCFTRATKIA VFAALRELRLSFVRFHG
Sbjct: 1 MLFDEVFSDPIEERGALELPCFTRATKIALRLGFLGLSLPPSGVFAALRELRLSFVRFHG 60
Query: 61 ELTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVS 120
ELTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVS
Sbjct: 61 ELTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVS 120
Query: 121 CCFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQ 180
CCFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQ
Sbjct: 121 CCFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQ 180
Query: 181 HTKFNPSCDRLLKTFSRIRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHV 240
HTKFNPSCDRLLKTFSRIRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHV
Sbjct: 181 HTKFNPSCDRLLKTFSRIRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHV 240
Query: 241 YGASVLYMLTMCTGISNLKIGGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQML 300
YGASVLYMLTMCTGISNLKIGGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQML
Sbjct: 241 YGASVLYMLTMCTGISNLKIGGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQML 300
Query: 301 NFRGKEHELDLLRVLVRVATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVEVSQAPP 360
NFRGKEHELDLLRVLVRVATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVEVSQAPP
Sbjct: 301 NFRGKEHELDLLRVLVRVATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVEVSQAPP 360
Query: 361 SLQRQ 365
SLQRQ
Sbjct: 361 SLQRQ 365
>Os07g0548100 Cyclin-like F-box domain containing protein
Length = 622
Score = 317 bits (812), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 227/359 (63%), Gaps = 14/359 (3%)
Query: 2 LFDEVFSDPIEERGALELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGE 61
L DE ++E GA ELPCF R TKI VFA LREL L V+F+GE
Sbjct: 187 LVDEFGDLVVDESGAFELPCFMRVTKITLHLGFLGLSLPPSGVFAELRELHLVHVQFNGE 246
Query: 62 LTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSC 121
LT+DD ++P LE L+I + LASLTLRL L M L VR L RLNA +P L+ L+V
Sbjct: 247 LTMDDVMLPSLERLDIRHSSGLASLTLRLPPLTQMTLYNVRWLRRLNAELPGLEVLSVIR 306
Query: 122 CFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQH 181
CF V + GV I+AEEL+ LRWLD Y P L+ F++MPRL L YPYG R
Sbjct: 307 CF-----RVHLEGVRILAEELEQLRWLDLYWPGLVYFNRMPRLRTLVPPAVYPYGLQR-- 359
Query: 182 TKFNPSCDRLLKTFSRIRCLEMLVFIEPHLG---GVNPLMEGITRLPDIRFLHLQFSAHG 238
FN SC LL I + ++V IEP G GV PLMEGIT+LP I+ L L G
Sbjct: 360 VLFNRSCQMLLNLCPSIYRVVLMVDIEPEQGGHHGVRPLMEGITQLPHIKILSLNLQTQG 419
Query: 239 HVYGASVLYMLTMCTGISNLKI-GGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREV 297
H YGASVL++LTMCTGI+ L + + ++ ++ CPPNC CDRP NWRD KDISM SLREV
Sbjct: 420 HAYGASVLHILTMCTGIAKLSLRNQEDFQVENACPPNCLCDRPRNWRD-KDISMMSLREV 478
Query: 298 QMLNFRGKEHELDLLRVLVRVATGIRRIRITCHRSFAAW--ERLSAVIRSFARPETSVE 354
++LNFRG++HELDL+RVLVRVA + +RI CH S A+ E L A +RSFA TSVE
Sbjct: 479 EILNFRGRQHELDLVRVLVRVAPALDLVRIICHPSSTAFGVESLRAYVRSFASFRTSVE 537
>Os07g0547600
Length = 602
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 198/342 (57%), Gaps = 12/342 (3%)
Query: 17 LELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGELTLDDTVMPFLEGLE 76
+LPC T TKI F LREL L VRF+G+ TLDD ++P LE L
Sbjct: 268 FQLPCLTEVTKITLSLGFLGLSLPQSGSFGKLRELHLEHVRFNGDYTLDDAMLPLLEYLG 327
Query: 77 IYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWLVAMAGVC 136
I + LASLTLRL+ L WM L V G+ RL+AVVP LK L CFC + V
Sbjct: 328 IRRSNGLASLTLRLESLGWMGLYDVVGIRRLDAVVPGLKALCSVGCFCYHD----VDSVS 383
Query: 137 IVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQHTKFNPSCDRLLKTFS 196
IVAEEL+ + W D+Y P+ F+ +P L ++ + LL +
Sbjct: 384 IVAEELEEIEWEDFYSPQSFNFNDLPLLTMIHTHCVF--CSESNEAFIEGYYQLLLNRYP 441
Query: 197 RIRCLEMLVFIE---PHLGGVNPLMEGITRLPDIRFLHLQFSAHGHVYGASVLYMLTMCT 253
RI L++ IE + +++ I +LP IR L+L GHVYGASVL++LT T
Sbjct: 442 RISHLDLRFVIELIRDEKSVTDSMIDNI-QLPYIRMLNLALKTEGHVYGASVLHILTKRT 500
Query: 254 GISNLK-IGGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKEHELDLL 312
I+ L+ + +++K D C C CD PP+WR+ DISMR LR+V++LNFRG+EHELDLL
Sbjct: 501 TIAELRLVNQEKFKSDDACKLECICDGPPDWRET-DISMRYLRKVEILNFRGEEHELDLL 559
Query: 313 RVLVRVATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVE 354
RVLVRVA +R IRI CHRS AAWE LSA IR FAR TSVE
Sbjct: 560 RVLVRVAPALRMIRIICHRSCAAWETLSAHIRGFAREATSVE 601
>Os07g0547700
Length = 630
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 167/349 (47%), Positives = 210/349 (60%), Gaps = 19/349 (5%)
Query: 11 IEERGA-LELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGELTLDDTVM 69
++E GA ELPCF R TKI VFA LREL L +VRF+GELTLDD ++
Sbjct: 187 VDEMGAGFELPCFMRVTKITLSLGFLGLSLPPSGVFAKLRELHLVYVRFNGELTLDDAML 246
Query: 70 PFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWL 129
P LE L+I +R LASLTLRL L M L +R L RLNAV+P LK L+VS CF L
Sbjct: 247 PSLEWLDIGKSRGLASLTLRLAPLTLMALHDMRWLRRLNAVLPGLKELSVSECF-----L 301
Query: 130 VAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVL--SVSPFYPYGRHRQHTKFNPS 187
+ GV IVA+E++ LRW +Y P L+ FS+MPRL L SVS F H FN
Sbjct: 302 EHLDGVSIVADEMEQLRWPGFYWPGLVYFSRMPRLRTLCVSVSDF----AHGSREAFNQG 357
Query: 188 CDRLLKTFSRIRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHVYGASVLY 247
LL + I LE+ V I+ GV PLM GIT LP + L L GH YGASVL+
Sbjct: 358 SQMLLNRYPSIHHLELRVVIKT---GVTPLMVGITGLPYTKILTLHLVTEGHSYGASVLH 414
Query: 248 MLTMCTGISNLKIGGDRYKD-QDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKE 306
+LTMCT I+ L + +Y + +D C C CD PNWR N++I + L EV +L +RG++
Sbjct: 415 ILTMCTRIAKLTLMIPKYFEVEDACAEICICDWLPNWR-NENILLECLEEVTILYYRGED 473
Query: 307 HELDLLRVLVRVATGIRRIRITCHRSFAAW--ERLSAVIRSFARPETSV 353
ELDLL++LVR ATG+RRIRI + S A W E L A +R++A T V
Sbjct: 474 DELDLLKLLVRGATGLRRIRIARYCSVADWEIEMLRADLRAYAEELTLV 522
>Os07g0547200
Length = 577
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 189/408 (46%), Gaps = 62/408 (15%)
Query: 6 VFSDPIEERGALELPCFTRATKIAXXXXXXXXXXXXXX----VFAALRELRLS--FVRFH 59
+ D EE L LPCF RAT+IA FA L +L LS FV
Sbjct: 152 ISEDYDEEANLLALPCFERATEIAISIADMAVQLAPDDHRGRTFAHLTKLHLSNTFVADE 211
Query: 60 GELTLDDTVM---PFLEGLEIYSARVLA-SLTLRLKHLNWMNLSAVRGLLRLNAVVPRLK 115
GEL L + V P L+ LE+ A LT+ L + + ++ L L+ L+
Sbjct: 212 GEL-LSEVVSHGCPCLKTLELIDIHAGARELTIHTTSLLTLCVVSINDLQLLDVDAANLR 270
Query: 116 FLTVSCCFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPY 175
++ V CF + + ++ ++ W D CP +K + P ++ ++
Sbjct: 271 WMKVKDCFDIDAAETEGSAMSLLTPAMEEFYWKD-CCPEEVKLVREPAGFIHKIACVDSA 329
Query: 176 GRHRQHTKFNPS-CDRLLKTFSRIRCLEMLVF---IEPHLGGVNPLMEGITRLPDIRFLH 231
+ + S R+L+ FS C E+L I+P + + LP L
Sbjct: 330 STNLSFISGSQSFYTRILQLFSST-CTEVLQIEFPIKPESEEQKKFLHTVD-LPYCLELE 387
Query: 232 LQFSAHGHVYGASVLYMLTM-----------------------CT--------------- 253
L H +++++L CT
Sbjct: 388 LIVEKKEHTLAPTIVHLLKKSRWIKRFSLEICPKKNHIQCEPNCTCRQPPNWRDQEISLG 447
Query: 254 GISNLKIGG------DRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKEH 307
+ L I G ++ Q C PNCSCD PPNWRDNKDISMRSL EV++LNF GKEH
Sbjct: 448 SLEELSINGFGGTYDEKQLVQHACSPNCSCDWPPNWRDNKDISMRSLGEVEILNFGGKEH 507
Query: 308 ELDLLRVLVRVATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVEV 355
ELDLLRVLVRVAT +RRIRITCHRS +AWERLSAVI+SFARPE SVEV
Sbjct: 508 ELDLLRVLVRVATVLRRIRITCHRSLSAWERLSAVIQSFARPEISVEV 555
>Os07g0118800 Conserved hypothetical protein
Length = 373
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 164/326 (50%), Gaps = 14/326 (4%)
Query: 17 LELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGELTLDDTV----MPFL 72
LELPCF ATK++ VFA L +L L VRFHG D P L
Sbjct: 42 LELPCFGSATKLSLDLGFLPLAVPVSGVFARLTDLSLDSVRFHGPCEFGDAASSRRFPSL 101
Query: 73 EGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWLVAM 132
+ L I + + L++ + L ++L +VRGL +LN V P L+ L+V CF + T +
Sbjct: 102 KNLNIRNTQGLSNFIIHSDSLLQLDLRSVRGLKQLNVVAPALQVLSVFFCF-ADTQARSQ 160
Query: 133 AGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQHTKFNPSCDRLL 192
I A +L+ L+W D + P ++F +M L L F YG + K N C RLL
Sbjct: 161 PVADIAAPQLETLQWEDAFDPSSVEFGEMASLRCLGTYFFLVYGL--EDFKNNRDCLRLL 218
Query: 193 KTFSR---IRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHVYGASVLYML 249
K F R R L F+ L LME +T LPDI L+L A+GH G S+ ++L
Sbjct: 219 KRFRRDAISRLTLTLAFLPKDLCDFEYLMENMTMLPDIVSLNLNVLANGHAIGPSLFHVL 278
Query: 250 TMCTGISNLKIGGDRYKD---QDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKE 306
MCT + LK+ D Q VC +C CD PPNW+ +++ ++ L EV++ N RG
Sbjct: 279 RMCTSVRRLKLVTHISLDLEAQAVCSSDCVCDLPPNWK-TEELLLKFLHEVEINNLRGTG 337
Query: 307 HELDLLRVLVRVATGIRRIRITCHRS 332
HE+ L++ L A ++ + I + S
Sbjct: 338 HEIALVKWLFSWAVVLKDMTINFYHS 363
>Os07g0118900 Cyclin-like F-box domain containing protein
Length = 518
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 174/349 (49%), Gaps = 20/349 (5%)
Query: 17 LELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGELTLDDTVM----PFL 72
LELPCF A +A VF+ L L L VRFH L D V PFL
Sbjct: 146 LELPCFASAANLALDLGFIAVAMPRSGVFSRLTLLSLDNVRFHRPCDLGDAVSSPRSPFL 205
Query: 73 EGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWLVAM 132
+ L I +A L++L++ + L + L ++GL +LN V P L L V CF S ++
Sbjct: 206 KRLTIQNAHGLSNLSIHSESLLQIRLGGLKGLKQLNVVAPALGALYVISCF-SDPLAMSQ 264
Query: 133 AGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQHTKFNPSCDRLL 192
I A +L+ L W D + P ++F M + L + +G+ + N C RLL
Sbjct: 265 PVADISAPQLETLHWEDAFDPSSVRFGNMANVKCLGTHFYLAFGQ--EDFGHNGDCLRLL 322
Query: 193 KTFSRIRCLEMLVFIEPHLGGVNPL-----MEGITRLPDIRFLHLQFSAHGHVYGASVLY 247
+ F + L+ L ++ +N L ME +T LPDI FL L A GH G SV +
Sbjct: 323 QRF-QFDALDRLSLTLAYMSELNDLENEYLMEEMTMLPDIMFLGLTVLASGHAIGPSVFH 381
Query: 248 MLTMCTGISNLKIGGDRY----KDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFR 303
+L M T I L++ D Y + + C +C+CD PPNW+ +++ + L EV++ NFR
Sbjct: 382 VLRMSTSIRRLELATDIYSSNPQARAACSSSCTCDLPPNWK-TEELKLAFLHEVEINNFR 440
Query: 304 GKEHELDLLRVLVRVATGIRRIRIT-CHRSFAAWER-LSAVIRSFARPE 350
G EH++ L++ L A ++ + I CH + R + ++ SF+RPE
Sbjct: 441 GTEHQIALVKQLFGWAAMLKDMTINFCHSITESMARKVCQMLLSFSRPE 489
>Os07g0548000 Cyclin-like F-box domain containing protein
Length = 349
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 91/148 (61%), Gaps = 5/148 (3%)
Query: 2 LFDEVFSDPIEERGALELPCFTRATKIAXXXXXXXXXXXXXXVFAALRELRLSFVRFHGE 61
L +E+ ++E GA ELPCF R TKI VFA LREL L V+F+GE
Sbjct: 206 LVEELGDLVVDESGAFELPCFMRVTKITLSLGFLGLSLPPSGVFAKLRELHLVHVQFNGE 265
Query: 62 LTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSC 121
LT++D ++P LE LEI + LASLTLRL L M L VR L RLNAV+P L+ L+V+
Sbjct: 266 LTMEDAMLPSLEWLEIRHSSGLASLTLRLAPLTQMTLYNVRRLRRLNAVLPGLEVLSVTE 325
Query: 122 CFCSSTWLVAMAGVCIVAEELQVLRWLD 149
CF L + GV IVAEEL+ LRWLD
Sbjct: 326 CF-----LEDLEGVSIVAEELEDLRWLD 348
>Os07g0229100 Cyclin-like F-box domain containing protein
Length = 571
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 23/350 (6%)
Query: 17 LELPCFTRATKIAXXXXXXXXXXXX-XXVFAALRELRLSFVRF--HGELTLDDTVM---- 69
+++PCF +AT+I VFA L L LS RF G+ L D V
Sbjct: 219 IQIPCFEKATEITIRLRGRLGIQLPPSGVFARLTALSLSHCRFDDQGQRDLGDAVSSEGC 278
Query: 70 PFLEGLEIYSARVLASLTLRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWL 129
P L L I A V+++L +R + L + LS + G+ +L P L L + C L
Sbjct: 279 PSLRELRIRDADVVSNLAIRSESLRLVQLSRLEGIRQLTISAPALTELDLYACL-----L 333
Query: 130 VAMAGVCIVAEELQVLRWLDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQHTKFNPSCD 189
M V I A L+ L W+D++ ++F + P ++ LSV YGR + P
Sbjct: 334 WGMPMVDIFAPALETLHWVDFFSSSSVRFVEKPNVHRLSVYGMV-YGR-----RNTPGSL 387
Query: 190 RLLKTFSRIRCLEM-LVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHVYGASVLYM 248
+L++ F+ R + + LV+ L++ + +LP + L L+ GH +G V ++
Sbjct: 388 QLVQHFTEARDVHLSLVYPSIMDMSCELLVQAVKKLPAVEILSLRLLTIGHTFGPCVYHL 447
Query: 249 LTMCTGISNLKIG-GDRYKDQDV-CPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKE 306
L M TGI LK+ D D +V C C C P W+ N +IS+ L++V++ N G E
Sbjct: 448 LKMSTGIRELKLKLEDHIADGEVPCSSGCVCYEPQAWKKN-NISLNFLQKVEINNLSGAE 506
Query: 307 HELDLLRVLVR-VATGIRRIRITCHRSFAAWERLSAVIRSFARPETSVEV 355
++ ++ L+R ++ I ++ E++S + SF+ P +E+
Sbjct: 507 RQIYFVKRLLRWTMPELKTITLSFDPLVTVSEKVSRKLLSFSTPGICMEI 556
>Os07g0142800
Length = 338
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 16/226 (7%)
Query: 137 IVAEELQVLRW----LDWYCPRLIKFSQMPRLYVLSVSPFYPYGRHRQHTKFNPSCDRLL 192
I A +L++L W LD + F +M L L ++ FY YG + N C RLL
Sbjct: 100 ISAPKLEILGWSTTNLDQSS---VNFGKMSYLKGLFIAYFYVYGEEDR----NHDCLRLL 152
Query: 193 K--TFSRIRCLEMLVFIEPHLGGVNPLMEGITRLPDIRFLHLQFSAHGHVYGASVLYMLT 250
+ F I L +L+ P + G LME +T LPDI FL+L F + G+ G S+ ++L
Sbjct: 153 QHFQFDAIPRLSILLTYFPTINGDIYLMEDMTVLPDIVFLNLIFFSSGYCIGPSLFHVLR 212
Query: 251 MCTGISNLKIGGDRYKDQDVCPPNCSCDRPPNWRDNKDISMRSLREVQMLNFRGKEHELD 310
M TG+ LK+ + ++ C +C CD PPNW ++++ + SLREVQ+ N RG E+E
Sbjct: 213 MTTGVRRLKLELHNHYKREFCGSDCVCDLPPNW-TSEELVLNSLREVQITNLRGTENEFA 271
Query: 311 LLRVLVRVATGIRRIRITCHRSF--AAWERLSAVIRSFARPETSVE 354
++ L A ++++ I H S + L ++ SF+RPE S++
Sbjct: 272 VVERLFSWAAVLKQMTINFHNSITVSTARELCEMLLSFSRPEISMK 317
>Os12g0545400
Length = 521
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 230 LHLQFSAHGHVYGASVLYMLTMCTGISNLKIGGDRYKDQDVCPPNCSCDRPPNWRDNKDI 289
L L A GHVYGA VL++L +CT L++ D + QD C +C CD+P NWR N+ I
Sbjct: 380 LELDLKAQGHVYGAIVLHLLGICTSTQRLRVLLDEFLSQDSCFVSCRCDQPNNWR-NQSI 438
Query: 290 SMRSLREVQMLNFRGKEHELDLLRVLVRVATGIRRIRITCHRSFAAWE----RLSAVIRS 345
S+ L+EV++ FRG+ HE+DLL+VL+R AT + R+ + R + LS ++ +
Sbjct: 439 SLTDLKEVEIRGFRGQNHEVDLLKVLLRCATVLERVTVRFSRKVTPSDCRCRELSGILEA 498
Query: 346 FARPETSVEVSQA 358
+ + SV Q+
Sbjct: 499 YPSVKCSVYYLQS 511
>Os07g0547500
Length = 330
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Query: 44 VFAALRELRLSFVRFHG-ELTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVR 102
VFAALREL L FVRF+G ELTLDDT+MPFLEG+EI+ +R LASLT+RLKHL MNL AVR
Sbjct: 239 VFAALRELHLVFVRFNGGELTLDDTMMPFLEGVEIWCSRGLASLTIRLKHLISMNLYAVR 298
Query: 103 GLL 105
G++
Sbjct: 299 GVV 301
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.141 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,984,990
Number of extensions: 454456
Number of successful extensions: 1332
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1304
Number of HSP's successfully gapped: 14
Length of query: 365
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 263
Effective length of database: 11,709,973
Effective search space: 3079722899
Effective search space used: 3079722899
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)