Os07g0118900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0118900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.14 | 0.189 | 9.75 | 1.52 | 0.374 | 0.422 | -0.379 | -3.5 | 0.12 | 9.07 | 29.82 | 1523 | -- | -- |
| 17.39 | 0.196 | 9.83 | 0.827 | 0.388 | 0.0545 | -0.386 | -- | 0.0816 | 9.26 | 24.5 | 3002 | -- | -- |
| 16.44 | 0.189 | 9.75 | 1.5 | 0.365 | 0.466 | -- | -3.97 | 0.139 | 9.29 | 29.78 | 1818 | -- | -- |
| 17.11 | 0.193 | 9.82 | 0.831 | 0.357 | 0.131 | -- | -- | 0.101 | 9.13 | 22.9 | 509 | -- | -- |
| 23.17 | 0.224 | 9.75 | 1.63 | -- | 0.515 | -- | -3.65 | 0.241 | -- | 29.3 | 2220 | -- | -- |
| 17.6 | 0.197 | 9.84 | 0.809 | 0.383 | -- | -0.392 | -- | 0.051 | 9 | -- | -- | -- | -- |
| 18.13 | 0.199 | 9.84 | 0.796 | 0.384 | -- | -- | -- | 0.0507 | 9.01 | -- | -- | -- | -- |
| 22.91 | 0.223 | 9.81 | 0.921 | -- | 0.26 | -- | -- | 0.142 | -- | 26.1 | 688 | -- | -- |
| 34.41 | 0.273 | 9.85 | -- | 0.422 | -0.0901 | -- | -- | -0.0693 | 8.31 | 24.9 | 96 | -- | -- |
| 26.62 | 0.241 | 9.85 | 0.795 | -- | -- | -- | -- | 0.0531 | -- | -- | -- | -- | -- |
| 34.82 | 0.276 | 9.86 | -- | 0.386 | -- | -- | -- | -0.0379 | 8.86 | -- | -- | -- | -- |
| 42.24 | 0.303 | 9.86 | -- | -- | 0.143 | -- | -- | -0.00487 | -- | 26.36 | 616 | -- | -- |
| 43.3 | 0.307 | 9.87 | -- | -- | -- | -- | -- | -0.0351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.34 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 3 | 15.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 4 | 15.62 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 7 | 15.67 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 8 | 15.67 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 12 | 15.69 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 13 | 15.69 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 15 | 15.70 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 17 | 15.71 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 26 | 15.73 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 39 | 15.76 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 68 | 15.79 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 157 | 15.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 178 | 15.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 197 | 15.95 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 198 | 15.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 255 | 15.99 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 256 | 15.99 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 257 | 15.99 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 384 | 16.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 385 | 16.04 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 387 | 16.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 391 | 16.05 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 421 | 16.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 422 | 16.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 448 | 16.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 468 | 16.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 479 | 16.08 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 507 | 16.08 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 514 | 16.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 515 | 16.09 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 516 | 16.09 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 546 | 16.10 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 547 | 16.10 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 549 | 16.10 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 625 | 16.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 775 | 16.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 842 | 16.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 849 | 16.16 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 897 | 16.16 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 924 | 16.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 932 | 16.17 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 934 | 16.17 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |