BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0222800 Os07g0222800|AK100823
         (131 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0222800  Acyl carrier protein-like protein                   193   3e-50
Os03g0352800  Similar to Acyl carrier protein 1 (EC 1.6.5.3)...   105   1e-23
Os05g0377000  Similar to Acyl carrier protein (ACP)               103   3e-23

>Os07g0222800 Acyl carrier protein-like protein
          Length = 131

 Score =  193 bits (490), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%)

Query: 37  RWLARPMSSHDAHLTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVM 96
           RWLARPMSSHDAHLTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVM
Sbjct: 37  RWLARPMSSHDAHLTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVM 96

Query: 97  AIEEEFKLEIPDQEADKIDSLPLAIEYVANHPMAA 131
           AIEEEFKLEIPDQEADKIDSLPLAIEYVANHPMAA
Sbjct: 97  AIEEEFKLEIPDQEADKIDSLPLAIEYVANHPMAA 131



>Os03g0352800 Similar to Acyl carrier protein 1 (EC 1.6.5.3) (EC 1.6.99.3)
          Length = 135

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 74/98 (75%), Gaps = 8/98 (8%)

Query: 37  RWLARPMSSHDA---HLTRDEVVDRLLDVLKCHPKVD-PSKVSPEAHFEKDLGLDSLDTV 92
           RW    MSS +A    L + EV +R++ V++   K+D P+KV+P+AHF+ DLGLDSLD V
Sbjct: 41  RW----MSSEEAKGSFLDKAEVTERIVKVVRNFQKIDDPAKVTPDAHFKNDLGLDSLDAV 96

Query: 93  EVVMAIEEEFKLEIPDQEADKIDSLPLAIEYVANHPMA 130
           EVVMA+EEEF  EIPD EADKIDS+ +A++++A+HP A
Sbjct: 97  EVVMALEEEFGFEIPDNEADKIDSIKVAVDFIASHPQA 134



>Os05g0377000 Similar to Acyl carrier protein (ACP)
          Length = 148

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 63/81 (77%)

Query: 44  SSHDAHLTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVMAIEEEFK 103
            S  + L + EV DR++ V+K   KV+PSKV+P AHF+KDLGLDSLDTVE+VMA EEEF 
Sbjct: 40  GSKGSFLDKGEVADRIVSVVKNFQKVEPSKVTPNAHFQKDLGLDSLDTVEIVMAFEEEFG 99

Query: 104 LEIPDQEADKIDSLPLAIEYV 124
            EIPD EA+KIDS+  A++++
Sbjct: 100 FEIPDNEAEKIDSIKTAVDFM 120



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,215,701
Number of extensions: 112952
Number of successful extensions: 322
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 325
Number of HSP's successfully gapped: 3
Length of query: 131
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 42
Effective length of database: 12,388,755
Effective search space: 520327710
Effective search space used: 520327710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 150 (62.4 bits)