Os07g0222800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acyl carrier protein-like protein.
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Os07g0222800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acyl carrier protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.84 | 0.14 | 12.5 | 0.0356 | 0.0459 | 0.285 | -0.155 | -0.0916 | -0.14 | 2.91 | 25.11 | 308 | -- | -- |
| 8.85 | 0.139 | 12.5 | 0.0617 | 0.0445 | 0.278 | -0.123 | -- | -0.13 | 2.52 | 25.17 | 306 | -- | -- |
| 8.88 | 0.139 | 12.5 | 0.0582 | 0.0545 | 0.282 | -- | -0.0189 | -0.127 | 2.91 | 25.37 | 289 | -- | -- |
| 8.88 | 0.139 | 12.5 | 0.0646 | 0.0574 | 0.285 | -- | -- | -0.128 | 3.05 | 25.39 | 292 | -- | -- |
| 8.94 | 0.139 | 12.5 | 0.0644 | -- | 0.274 | -- | -0.0156 | -0.123 | -- | 25.3 | 353 | -- | -- |
| 12.45 | 0.165 | 12.5 | 0.148 | 0.163 | -- | 0.161 | -- | -0.00436 | 17.7 | -- | -- | -- | -- |
| 12.51 | 0.166 | 12.5 | 0.146 | 0.165 | -- | -- | -- | -0.00381 | 17.9 | -- | -- | -- | -- |
| 8.94 | 0.139 | 12.5 | 0.0687 | -- | 0.274 | -- | -- | -0.122 | -- | 25.3 | 354 | -- | -- |
| 8.98 | 0.14 | 12.5 | -- | 0.0609 | 0.291 | -- | -- | -0.137 | 3.26 | 25.31 | 289 | -- | -- |
| 13.92 | 0.174 | 12.5 | 0.142 | -- | -- | -- | -- | -0.0076 | -- | -- | -- | -- | -- |
| 13.08 | 0.169 | 12.5 | -- | 0.163 | -- | -- | -- | -0.0201 | 18 | -- | -- | -- | -- |
| 9.06 | 0.14 | 12.5 | -- | -- | 0.281 | -- | -- | -0.132 | -- | 25.4 | 354 | -- | -- |
| 14.45 | 0.177 | 12.5 | -- | -- | -- | -- | -- | -0.0233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.71 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 23 |
| 2 | 8.78 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 22 |
| 6 | 8.79 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 7 | 8.80 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 23 |
| 16 | 8.84 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 23 |
| 22 | 8.87 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 29 | 8.90 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 30 | 8.91 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 36 | 8.93 | temperature | 25 | 270 | < th | dose independent | rect. | 14 | 23 |
| 37 | 8.93 | temperature | 25 | 270 | < th | dose independent | rect. | 20 | 23 |
| 45 | 8.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 50 | 8.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 60 | 8.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 80 | 9.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 91 | 9.04 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 23 |
| 94 | 9.05 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 22 |
| 113 | 9.07 | temperature | 25 | 270 | > th | dose dependent | sin | 10 | NA |
| 164 | 9.12 | temperature | 25 | 720 | > th | dose independent | rect. | 19 | 23 |
| 245 | 9.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 254 | 9.21 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 339 | 9.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 357 | 9.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 378 | 9.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 395 | 9.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 437 | 9.31 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 438 | 9.31 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 448 | 9.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 465 | 9.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 480 | 9.33 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 507 | 9.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 579 | 9.38 | temperature | 25 | 720 | > th | dose independent | sin | 22 | NA |
| 632 | 9.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 634 | 9.40 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 673 | 9.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 705 | 9.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 734 | 9.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 738 | 9.44 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 759 | 9.44 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 767 | 9.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 820 | 9.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 834 | 9.47 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 851 | 9.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 854 | 9.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 867 | 9.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 871 | 9.48 | temperature | 25 | 720 | < th | dose independent | sin | 23 | NA |
| 893 | 9.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 942 | 9.49 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 950 | 9.49 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 967 | 9.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 12 |