Os05g0377000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl carrier protein (ACP).
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Os05g0377000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl carrier protein (ACP).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.15 | 0.349 | 8.36 | -0.821 | 0.382 | 0.6 | 0.227 | 0.487 | -0.487 | 9.9 | 77 | 913 | -- | -- |
| 54.83 | 0.345 | 8.38 | -0.85 | 0.324 | 0.662 | 0.12 | -- | -0.525 | 11.3 | 75 | 1126 | -- | -- |
| 55.05 | 0.346 | 8.37 | -0.841 | 0.384 | 0.584 | -- | 0.365 | -0.488 | 9.89 | 76 | 927 | -- | -- |
| 54.69 | 0.344 | 8.38 | -0.873 | 0.261 | 0.658 | -- | -- | -0.525 | 11.3 | 75.8 | 1171 | -- | -- |
| 57.08 | 0.352 | 8.38 | -0.814 | -- | 0.674 | -- | 0.194 | -0.495 | -- | 78.97 | 1388 | -- | -- |
| 61.56 | 0.368 | 8.37 | -0.804 | 0.124 | -- | 0.0447 | -- | -0.471 | 10.4 | -- | -- | -- | -- |
| 61.57 | 0.367 | 8.37 | -0.803 | 0.124 | -- | -- | -- | -0.471 | 10.3 | -- | -- | -- | -- |
| 57.05 | 0.352 | 8.38 | -0.859 | -- | 0.6 | -- | -- | -0.512 | -- | 76.78 | 1390 | -- | -- |
| 72.42 | 0.396 | 8.35 | -- | 0.311 | 0.557 | -- | -- | -0.408 | 11.1 | 83.03 | 1016 | -- | -- |
| 62.51 | 0.369 | 8.37 | -0.805 | -- | -- | -- | -- | -0.471 | -- | -- | -- | -- | -- |
| 78.54 | 0.415 | 8.35 | -- | 0.129 | -- | -- | -- | -0.381 | 10.8 | -- | -- | -- | -- |
| 72.63 | 0.397 | 8.36 | -- | -- | 0.673 | -- | -- | -0.458 | -- | 86 | 1650 | -- | -- |
| 79.58 | 0.416 | 8.35 | -- | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.90 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 5 | 52.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 10 | 52.14 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 44 | 52.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 48 | 52.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 49 | 52.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 52 | 52.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 93 | 52.60 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 102 | 52.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 150 | 52.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 178 | 52.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 221 | 53.06 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 226 | 53.07 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 230 | 53.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 247 | 53.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 250 | 53.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 253 | 53.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 256 | 53.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 263 | 53.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 278 | 53.21 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 323 | 53.35 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 339 | 53.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 344 | 53.39 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 351 | 53.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 393 | 53.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 409 | 53.50 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 423 | 53.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 465 | 53.61 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 605 | 53.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 634 | 53.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 669 | 54.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 677 | 54.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 702 | 54.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 706 | 54.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 788 | 54.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 14 |
| 789 | 54.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 792 | 54.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 14 |
| 859 | 54.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 871 | 54.44 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 944 | 54.56 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 964 | 54.59 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 984 | 54.63 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |